RNA–Protein interactions for RNA: ENST00000334271.7

AP1S3-201, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 2

Gene AP1S3, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-201ENST00000334271 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
AP1S3-201ENST00000334271 RGS3P49796 1198 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 RBM6P78332 1123 aaKnown RBP12.81□□□□□ -0.36
AP1S3-201ENST00000334271 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 RBM19Q9Y4C8 960 aaKnown RBP12.81□□□□□ -0.36
AP1S3-201ENST00000334271 UNCXA6NJT0 531 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 ATP6V1AP38606 617 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 CASP7P55210 303 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 ZC3H15Q8WU90 426 aaKnown RBP12.81□□□□□ -0.36
AP1S3-201ENST00000334271 NUP98P52948 1817 aa12.81□□□□□ -0.36
AP1S3-201ENST00000334271 SRGAP3O43295 1099 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 PCCAP05165 728 aaPredicted RBP12.8□□□□□ -0.36
AP1S3-201ENST00000334271 CWF19L2Q2TBE0 894 aaKnown RBP12.8□□□□□ -0.36
AP1S3-201ENST00000334271 C8orf34Q49A92 452 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 IL27Q8NEV9 243 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 IGSF5Q9NSI5 407 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 RGPD3A6NKT7 1758 aaPredicted RBP12.8□□□□□ -0.36
AP1S3-201ENST00000334271 RGPD4Q7Z3J3 1758 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 PARP10Q53GL7 1025 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 ZNF652Q9Y2D9 606 aa12.8□□□□□ -0.36
AP1S3-201ENST00000334271 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
AP1S3-201ENST00000334271 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
AP1S3-201ENST00000334271 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
AP1S3-201ENST00000334271 TTLL7Q6ZT98 887 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 LNPKQ9C0E8 428 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 COPRSQ9NQ92 184 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 TAF1LQ8IZX4 1826 aa12.79□□□□□ -0.36
AP1S3-201ENST00000334271 TTC36A6NLP5 189 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 CRKLP46109 303 aaKnown RBP12.78□□□□□ -0.36
AP1S3-201ENST00000334271 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 NBPF11Q86T75 865 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 ZBTB38Q8NAP3 1195 aaPredicted RBP12.78□□□□□ -0.36
AP1S3-201ENST00000334271 SUCLG2Q96I99 432 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 LAMB2P55268 1798 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 SCN7AQ01118 1682 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
AP1S3-201ENST00000334271 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 ACSBG1Q96GR2 724 aa12.78□□□□□ -0.36
AP1S3-201ENST00000334271 UPF2Q9HAU5 1272 aaKnown RBP12.78□□□□□ -0.36
AP1S3-201ENST00000334271 DZIP3Q86Y13 1208 aaKnown RBP12.77□□□□□ -0.36
AP1S3-201ENST00000334271 ZBTB1Q9Y2K1 713 aa12.77□□□□□ -0.36
AP1S3-201ENST00000334271 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 TTC41PQ6P2S7 1318 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 SALL3Q9BXA9 1300 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 A0A0G2JS52 829 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
AP1S3-201ENST00000334271 ZNF34Q8IZ26 560 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 FBXO41Q8TF61 875 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 KAZALD1Q96I82 304 aa12.77□□□□□ -0.37
AP1S3-201ENST00000334271 BICC1Q9H694 974 aaKnown RBP12.77□□□□□ -0.37
AP1S3-201ENST00000334271 TESPA1A2RU30 521 aaPredicted RBP12.76□□□□□ -0.37
AP1S3-201ENST00000334271 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
AP1S3-201ENST00000334271 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
AP1S3-201ENST00000334271 TTC22Q5TAA0 569 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 RHPN1Q8TCX5 695 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 GPATCH3Q96I76 525 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 MYH3P11055 1940 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 CIAO1O76071 339 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 G3BP1Q13283 466 aaKnown RBP eCLIP12.76□□□□□ -0.37
AP1S3-201ENST00000334271 MYBPC2Q14324 1141 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 EVI5LQ96CN4 794 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 GPR108Q9NPR9 543 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 PRDM4Q9UKN5 801 aa12.76□□□□□ -0.37
AP1S3-201ENST00000334271 TUBGCP6Q96RT7 1819 aa12.75□□□□□ -0.37
AP1S3-201ENST00000334271 RIOK3O14730 519 aaKnown RBP12.75□□□□□ -0.37
AP1S3-201ENST00000334271 RPS6KA4O75676 772 aa12.75□□□□□ -0.37
AP1S3-201ENST00000334271 ITPK1Q13572 414 aa12.75□□□□□ -0.37
AP1S3-201ENST00000334271 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
AP1S3-201ENST00000334271 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
AP1S3-201ENST00000334271 ZNF830Q96NB3 372 aaPredicted RBP12.75□□□□□ -0.37
AP1S3-201ENST00000334271 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
AP1S3-201ENST00000334271 ANKRD62A6NC57 917 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 ANP32AP39687 249 aaKnown RBP12.74□□□□□ -0.37
AP1S3-201ENST00000334271 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 NLRP10Q86W26 655 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 ZBTB3Q9H5J0 574 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 KCNQ2O43526 872 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 CSF1RP07333 972 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 FOXO4P98177 505 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 C4BP0C0L5 1744 aa12.74□□□□□ -0.37
AP1S3-201ENST00000334271 ERC2O15083 957 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 MX1P20591 662 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 RFX5P48382 616 aaPredicted RBP12.73□□□□□ -0.37
AP1S3-201ENST00000334271 PDE1AP54750 535 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 DDRGK1Q96HY6 314 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 EXOC6BQ9Y2D4 811 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 CDC45O75419 566 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 CAMTA2O94983 1202 aa12.73□□□□□ -0.37
AP1S3-201ENST00000334271 FOXD4Q12950 439 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms