RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 ATF7IPQ6VMQ6 1270 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 KIF6Q6ZMV9 814 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 CIB2O75838 187 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 BRD3Q15059 726 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 KIAA0753Q2KHM9 967 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 GMNNO75496 209 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 CABS1Q96KC9 395 aa11.74□□□□□ -0.53
SPTBN1-201ENST00000333896 JAKMIP2Q96AA8 810 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 GNL3LQ9NVN8 582 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 PRC1O43663 620 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 DIAPH1O60610 1272 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 RBM5P52756 815 aaKnown RBP eCLIP11.73□□□□□ -0.532e-10■■■■□ 20.1
SPTBN1-201ENST00000333896 RPGRIP1Q96KN7 1286 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 DNAI1Q9UI46 699 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 UIMC1Q96RL1 719 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 IBTKQ9P2D0 1353 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 RGS22Q8NE09 1264 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 MTUS1Q9ULD2 1270 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 GPRASP1Q5JY77 1395 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 ACTN2P35609 894 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 SELENOSQ9BQE4 189 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 FAM177BA6PVY3 158 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 GNAI2P04899 355 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 HCLS1P14317 486 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 SSFA2P28290 1259 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 HNRNPMP52272 730 aaKnown RBP eCLIP11.73□□□□□ -0.531e-6■■■■□ 24.2
SPTBN1-201ENST00000333896 DIXDC1Q155Q3 683 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
SPTBN1-201ENST00000333896 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 KRT86O43790 486 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 ZEB2O60315 1214 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 RIOK3O14730 519 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 PPP1R12CQ9BZL4 782 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■■□□□ 13.6
SPTBN1-201ENST00000333896 FYCO1Q9BQS8 1478 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 RAPGEF2Q9Y4G8 1499 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 ZBTB9Q96C00 473 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 STX6O43752 255 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 SMARCC2Q8TAQ2 1214 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 CCDC77Q9BR77 488 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 MYO1BO43795 1136 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 TNIP1Q15025 636 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 TMEM87AQ8NBN3 555 aa11.72□□□□□ -0.53
SPTBN1-201ENST00000333896 HMOX1P09601 288 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 CUX2O14529 1486 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 CETN3O15182 167 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 MPHOSPH8Q99549 860 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 FAN1Q9Y2M0 1017 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 MAGEA9P43362 315 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 KRT83P78385 493 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 PPP2R5AQ15172 486 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 MYH6P13533 1939 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 LRRC9Q6ZRR7 1453 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 UBAC1Q9BSL1 405 aa11.71□□□□□ -0.53
SPTBN1-201ENST00000333896 BICDL2A1A5D9 508 aa11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 SMIM24O75264 130 aa11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 CYLC1P35663 651 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 HDAC1Q13547 482 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 MCTP2Q6DN12 878 aa11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 TRIM6Q9C030 488 aaPredicted RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 PRIM1P49642 420 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 RRP15Q9Y3B9 282 aaKnown RBP11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.54
SPTBN1-201ENST00000333896 PPP2R3AQ06190 1150 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 RUFY4Q6ZNE9 571 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 MMS22LQ6ZRQ5 1243 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 SEC62Q99442 399 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 ZC4H2Q9NQZ6 224 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 RNF216Q9NWF9 866 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 ERCC5P28715 1186 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 Q9H521 79 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 FGD6Q6ZV73 1430 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 INTS8Q75QN2 995 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 ZNF354CQ86Y25 554 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 FAM71BQ8TC56 605 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 FKBP4Q02790 459 aaKnown RBP eCLIP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 CFAP157Q5JU67 520 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 DACT3Q96B18 629 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 NUF2Q9BZD4 464 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 OAS2P29728 719 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 SPTY2D1Q68D10 685 aaPredicted RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 MORC4Q8TE76 937 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 SYT1P21579 422 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 UBASH3AP57075 661 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 DYNC1I2Q13409 638 aaKnown RBP11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 BCL2L12Q9HB09 334 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 PLCB1Q9NQ66 1216 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 TIAM1Q13009 1591 aa11.7□□□□□ -0.54
SPTBN1-201ENST00000333896 EVCP57679 992 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 CLUL1Q15846 466 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 HIP1RO75146 1068 aa11.69□□□□□ -0.54
SPTBN1-201ENST00000333896 SEPT2Q15019 361 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms