RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TFCP2L1Q9NZI6 479 aa28.72■■■□□ 2.19
TSEN54-201ENST00000333213 MYH3P11055 1940 aa28.71■■■□□ 2.19
TSEN54-201ENST00000333213 G3BP1Q13283 466 aaKnown RBP eCLIP28.71■■■□□ 2.19
TSEN54-201ENST00000333213 GREM2Q9H772 168 aa28.71■■■□□ 2.19
TSEN54-201ENST00000333213 TUBGCP6Q96RT7 1819 aa28.71■■■□□ 2.19
TSEN54-201ENST00000333213 ERFEQ4G0M1 354 aa28.71■■■□□ 2.19
TSEN54-201ENST00000333213 NFIXQ14938 502 aa28.7■■■□□ 2.18
TSEN54-201ENST00000333213 C8orf34Q49A92 452 aa28.69■■■□□ 2.18
TSEN54-201ENST00000333213 DEFB132Q7Z7B7 95 aa28.69■■■□□ 2.18
TSEN54-201ENST00000333213 ERC1Q8IUD2 1116 aa28.69■■■□□ 2.18
TSEN54-201ENST00000333213 CCDC57Q2TAC2 916 aa28.68■■■□□ 2.18
TSEN54-201ENST00000333213 ATG9AQ7Z3C6 839 aa28.68■■■□□ 2.18
TSEN54-201ENST00000333213 COL23A1Q86Y22 540 aaPredicted RBP28.68■■■□□ 2.18
TSEN54-201ENST00000333213 ANP32AP39687 249 aaKnown RBP28.67■■■□□ 2.18
TSEN54-201ENST00000333213 BACH2Q9BYV9 841 aa28.67■■■□□ 2.18
TSEN54-201ENST00000333213 ANO8Q9HCE9 1232 aaPredicted RBP28.67■■■□□ 2.18
TSEN54-201ENST00000333213 LAMB2P55268 1798 aa28.67■■■□□ 2.18
TSEN54-201ENST00000333213 ABCC12Q96J65 1359 aa28.67■■■□□ 2.18
TSEN54-201ENST00000333213 ITGA6P23229 1130 aa28.67■■■□□ 2.18
TSEN54-201ENST00000333213 LRRC24Q50LG9 513 aa28.67■■■□□ 2.18
TSEN54-201ENST00000333213 PUS3Q9BZE2 481 aaKnown RBP28.67■■■□□ 2.18
TSEN54-201ENST00000333213 GSPT1P15170 499 aaKnown RBP28.66■■■□□ 2.18
TSEN54-201ENST00000333213 PDE1AP54750 535 aa28.66■■■□□ 2.18
TSEN54-201ENST00000333213 IFIT5Q13325 482 aaKnown RBP28.66■■■□□ 2.18
TSEN54-201ENST00000333213 TSHZ3Q63HK5 1081 aa28.66■■■□□ 2.18
TSEN54-201ENST00000333213 C3orf67Q6ZVT6 689 aa28.66■■■□□ 2.18
TSEN54-201ENST00000333213 OSBPL3Q9H4L5 887 aa28.65■■■□□ 2.18
TSEN54-201ENST00000333213 NBPF5PQ86XG9 351 aaPredicted RBP28.65■■■□□ 2.18
TSEN54-201ENST00000333213 PNPLA7Q6ZV29 1317 aa28.64■■■□□ 2.18
TSEN54-201ENST00000333213 SLC10A5Q5PT55 438 aa28.64■■■□□ 2.18
TSEN54-201ENST00000333213 EAF2Q96CJ1 260 aaPredicted RBP28.64■■■□□ 2.18
TSEN54-201ENST00000333213 EYA2O00167 538 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 MX1P20591 662 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 TM4SF1P30408 202 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 BMP2KLQ5H9B9 411 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 CLASRPQ8N2M8 674 aaKnown RBP28.63■■■□□ 2.17
TSEN54-201ENST00000333213 CCDC24Q8N4L8 307 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 IPO9Q96P70 1041 aaKnown RBP28.63■■■□□ 2.17
TSEN54-201ENST00000333213 NYXQ9GZU5 481 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 CARMIL3Q8ND23 1372 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 TFCP2Q12800 502 aa28.63■■■□□ 2.17
TSEN54-201ENST00000333213 TTC22Q5TAA0 569 aa28.62■■■□□ 2.17
TSEN54-201ENST00000333213 TPTE2Q6XPS3 522 aa28.62■■■□□ 2.17
TSEN54-201ENST00000333213 STAP2Q9UGK3 403 aa28.62■■■□□ 2.17
TSEN54-201ENST00000333213 BAG6P46379 1132 aa28.61■■■□□ 2.17
TSEN54-201ENST00000333213 SF3B2Q13435 895 aaKnown RBP28.61■■■□□ 2.17
TSEN54-201ENST00000333213 ANKRD18BA2A2Z9 1011 aa28.61■■■□□ 2.17
TSEN54-201ENST00000333213 CIAO1O76071 339 aa28.61■■■□□ 2.17
TSEN54-201ENST00000333213 GTF2E1P29083 439 aaPredicted RBP28.61■■■□□ 2.17
TSEN54-201ENST00000333213 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
TSEN54-201ENST00000333213 IL15P40933 162 aaPredicted RBP28.59■■■□□ 2.17
TSEN54-201ENST00000333213 SLC15A2Q16348 729 aa28.59■■■□□ 2.17
TSEN54-201ENST00000333213 COL4A1P02462 1669 aa28.59■■■□□ 2.17
TSEN54-201ENST00000333213 HSP90B1P14625 803 aaKnown RBP28.59■■■□□ 2.17
TSEN54-201ENST00000333213 DDR1Q08345 913 aa28.59■■■□□ 2.17
TSEN54-201ENST00000333213 AACSQ86V21 672 aa28.59■■■□□ 2.17
TSEN54-201ENST00000333213 CASZ1Q86V15 1759 aa28.58■■■□□ 2.17
TSEN54-201ENST00000333213 SF3B3Q15393 1217 aaKnown RBP28.58■■■□□ 2.17
TSEN54-201ENST00000333213 CCDC152Q4G0S7 254 aa28.58■■■□□ 2.17
TSEN54-201ENST00000333213 CCDC8Q9H0W5 538 aaPredicted RBP28.58■■■□□ 2.17
TSEN54-201ENST00000333213 TLR7Q9NYK1 1049 aaKnown RBP28.58■■■□□ 2.17
TSEN54-201ENST00000333213 RTL9Q8NET4 1388 aa28.58■■■□□ 2.17
TSEN54-201ENST00000333213 TAF7LQ5H9L4 462 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 FLAD1Q8NFF5 587 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 FBXO3Q9UK99 471 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 RIPOR2Q9Y4F9 1068 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 TNNI3KQ59H18 835 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 FPGT-TNNI3KV9GXZ4 949 aa28.57■■■□□ 2.16
TSEN54-201ENST00000333213 LDHAL6AQ6ZMR3 332 aa28.56■■■□□ 2.16
TSEN54-201ENST00000333213 PI4K2BQ8TCG2 481 aa28.56■■■□□ 2.16
TSEN54-201ENST00000333213 LRP5O75197 1615 aa28.56■■■□□ 2.16
TSEN54-201ENST00000333213 PRR5LQ6MZQ0 368 aa28.55■■■□□ 2.16
TSEN54-201ENST00000333213 POLRMTO00411 1230 aaKnown RBP28.55■■■□□ 2.16
TSEN54-201ENST00000333213 SERPINB2P05120 415 aa28.55■■■□□ 2.16
TSEN54-201ENST00000333213 IFIT2P09913 472 aaKnown RBP28.55■■■□□ 2.16
TSEN54-201ENST00000333213 TNRC6CQ9HCJ0 1690 aaKnown RBP28.55■■■□□ 2.16
TSEN54-201ENST00000333213 CNBD1Q8NA66 436 aa28.54■■■□□ 2.16
TSEN54-201ENST00000333213 RIC1Q4ADV7 1423 aa28.53■■■□□ 2.16
TSEN54-201ENST00000333213 SEC24BO95487 1268 aa28.53■■■□□ 2.16
TSEN54-201ENST00000333213 SDSP20132 328 aa28.53■■■□□ 2.16
TSEN54-201ENST00000333213 NLRP3Q96P20 1036 aa28.53■■■□□ 2.16
TSEN54-201ENST00000333213 STK32BQ9NY57 414 aa28.53■■■□□ 2.16
TSEN54-201ENST00000333213 DBNLQ9UJU6 430 aaKnown RBP28.53■■■□□ 2.16
TSEN54-201ENST00000333213 AOX1Q06278 1338 aa28.52■■■□□ 2.16
TSEN54-201ENST00000333213 NLGN1Q8N2Q7 840 aa28.52■■■□□ 2.16
TSEN54-201ENST00000333213 TAF1P21675 1872 aa28.51■■■□□ 2.15
TSEN54-201ENST00000333213 TIMM10P62072 90 aa28.51■■■□□ 2.15
TSEN54-201ENST00000333213 GPR108Q9NPR9 543 aa28.51■■■□□ 2.15
TSEN54-201ENST00000333213 CNNM1Q9NRU3 951 aa28.51■■■□□ 2.15
TSEN54-201ENST00000333213 TTC41PQ6P2S7 1318 aa28.5■■■□□ 2.15
TSEN54-201ENST00000333213 NPHP1O15259 732 aa28.5■■■□□ 2.15
TSEN54-201ENST00000333213 CCDC125Q86Z20 511 aa28.5■■■□□ 2.15
TSEN54-201ENST00000333213 VGLL2Q8N8G2 317 aa28.5■■■□□ 2.15
TSEN54-201ENST00000333213 ECHDC1Q9NTX5 307 aa28.5■■■□□ 2.15
TSEN54-201ENST00000333213 DBNDD2Q9BQY9 259 aa28.49■■■□□ 2.15
TSEN54-201ENST00000333213 CEP126Q9P2H0 1117 aa28.49■■■□□ 2.15
TSEN54-201ENST00000333213 PDGFDQ9GZP0 370 aaPredicted RBP28.49■■■□□ 2.15
TSEN54-201ENST00000333213 QSER1Q2KHR3 1735 aa28.48■■■□□ 2.15
TSEN54-201ENST00000333213 ZNF609O15014 1411 aa28.48■■■□□ 2.15
TSEN54-201ENST00000333213 MSL1Q68DK7 614 aa28.48■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms