RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 FER1L6Q2WGJ9 1857 aa12.37□□□□□ -0.43
SYN3-201ENST00000332840 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
SYN3-201ENST00000332840 FSTL1Q12841 308 aa12.36□□□□□ -0.43
SYN3-201ENST00000332840 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
SYN3-201ENST00000332840 PLIN1O60240 522 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 HSPA1AP0DMV8 641 aaKnown RBP12.35□□□□□ -0.43
SYN3-201ENST00000332840 HSPA1BP0DMV9 641 aaKnown RBP12.35□□□□□ -0.43
SYN3-201ENST00000332840 NEXNQ0ZGT2 675 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 TMC4Q7Z404 712 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 CCDC191Q8NCU4 936 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 C7orf43Q8WVR3 580 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 ZNF428Q96B54 188 aa12.35□□□□□ -0.43
SYN3-201ENST00000332840 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
SYN3-201ENST00000332840 ATP5J2-PTCD1G3V325 749 aa12.34□□□□□ -0.43
SYN3-201ENST00000332840 BCAR3O75815 825 aa12.34□□□□□ -0.43
SYN3-201ENST00000332840 PRELPP51888 382 aa12.34□□□□□ -0.43
SYN3-201ENST00000332840 FKBP4Q02790 459 aaKnown RBP eCLIP12.34□□□□□ -0.43
SYN3-201ENST00000332840 KSR2Q6VAB6 950 aa12.34□□□□□ -0.43
SYN3-201ENST00000332840 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
SYN3-201ENST00000332840 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
SYN3-201ENST00000332840 BBOX1O75936 387 aa12.33□□□□□ -0.44
SYN3-201ENST00000332840 DPY19L2Q6NUT2 758 aa12.33□□□□□ -0.44
SYN3-201ENST00000332840 DDX46Q7L014 1031 aaKnown RBP12.33□□□□□ -0.44
SYN3-201ENST00000332840 ZBTB38Q8NAP3 1195 aaPredicted RBP12.33□□□□□ -0.44
SYN3-201ENST00000332840 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
SYN3-201ENST00000332840 PSMD1Q99460 953 aa12.33□□□□□ -0.44
SYN3-201ENST00000332840 MYD88Q99836 296 aa12.33□□□□□ -0.44
SYN3-201ENST00000332840 CWC25Q9NXE8 425 aaPredicted RBP12.33□□□□□ -0.44
SYN3-201ENST00000332840 SLX4Q8IY92 1834 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 VAMP4O75379 141 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 PCCAP05165 728 aaPredicted RBP12.32□□□□□ -0.44
SYN3-201ENST00000332840 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
SYN3-201ENST00000332840 FLIIQ13045 1269 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 MAP3K2Q9Y2U5 619 aa12.32□□□□□ -0.44
SYN3-201ENST00000332840 GLTPD2A6NH11 291 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
SYN3-201ENST00000332840 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
SYN3-201ENST00000332840 GRAPQ13588 217 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 PDE3AQ14432 1141 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
SYN3-201ENST00000332840 POTEHQ6S545 545 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 EXOC6Q8TAG9 804 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 GRAPLQ8TC17 118 aaPredicted RBP12.31□□□□□ -0.44
SYN3-201ENST00000332840 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
SYN3-201ENST00000332840 MS4A1P11836 297 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 C3orf67Q6ZVT6 689 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 CRBNQ96SW2 442 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 VPS33BQ9H267 617 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 ABCC4O15439 1325 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 NUP98P52948 1817 aa12.3□□□□□ -0.44
SYN3-201ENST00000332840 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
SYN3-201ENST00000332840 DNAAF4Q8WXU2 420 aa12.29□□□□□ -0.44
SYN3-201ENST00000332840 JDP2Q8WYK2 163 aa12.29□□□□□ -0.44
SYN3-201ENST00000332840 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
SYN3-201ENST00000332840 CDHR2Q9BYE9 1310 aa12.29□□□□□ -0.44
SYN3-201ENST00000332840 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 VEGFAP15692 232 aaPredicted RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 IARSP41252 1262 aaKnown RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 CCDC152Q4G0S7 254 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 SYNE4Q8N205 404 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 FRAT1Q92837 279 aaPredicted RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 CCDC136Q96JN2 1154 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
SYN3-201ENST00000332840 SNED1Q8TER0 1413 aa12.28□□□□□ -0.44
SYN3-201ENST00000332840 NEURL1BA8MQ27 555 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 IPO8O15397 1037 aaKnown RBP12.27□□□□□ -0.45
SYN3-201ENST00000332840 PDE8AO60658 829 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 IGKV5-2P06315 115 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 ZKSCAN2Q63HK3 967 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 DPP8Q6V1X1 898 aaPredicted RBP12.27□□□□□ -0.45
SYN3-201ENST00000332840 G2E3Q7L622 706 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 BCL2L13Q9BXK5 485 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 KIF16BQ96L93 1317 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 ANKRD36CQ5JPF3 1778 aa12.27□□□□□ -0.45
SYN3-201ENST00000332840 IQCA1LA6NCM1 817 aa12.26□□□□□ -0.45
SYN3-201ENST00000332840 POTECB2RU33 542 aa12.26□□□□□ -0.45
SYN3-201ENST00000332840 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
SYN3-201ENST00000332840 OLFM4Q6UX06 510 aa12.26□□□□□ -0.45
SYN3-201ENST00000332840 MPNDQ8N594 471 aa12.26□□□□□ -0.45
SYN3-201ENST00000332840 RTFDC1Q9BY42 306 aaPredicted RBP12.26□□□□□ -0.45
SYN3-201ENST00000332840 SCN4AP35499 1836 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 POTEIP0CG38 1075 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 RPS8P62241 208 aaKnown RBP12.25□□□□□ -0.45
SYN3-201ENST00000332840 AAMPQ13685 434 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 GCKRQ14397 625 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
SYN3-201ENST00000332840 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms