RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 A0A1B0GUL7 405 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 ATP2B2Q01814 1243 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 TNNI3KQ59H18 835 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 SLC9C2Q5TAH2 1124 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 UTP14AQ9BVJ6 771 aaKnown RBP11.21□□□□□ -0.62
SS18L1-201ENST00000331758 HMG20BQ9P0W2 317 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 FPGT-TNNI3KV9GXZ4 949 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.62
SS18L1-201ENST00000331758 TNMDQ9H2S6 317 aa11.21□□□□□ -0.62
SS18L1-201ENST00000331758 PPP1R1BQ9UD71 204 aaPredicted RBP11.21□□□□□ -0.62
SS18L1-201ENST00000331758 FAM227BQ96M60 508 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 SETDB2Q96T68 719 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 ZC3H13Q5T200 1668 aaKnown RBP11.2□□□□□ -0.62
SS18L1-201ENST00000331758 TTF1Q15361 905 aaPredicted RBP11.2□□□□□ -0.62
SS18L1-201ENST00000331758 CFAP45Q9UL16 551 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 ASAP1Q9ULH1 1129 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 DLC1Q96QB1 1528 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 DTNBO60941 627 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 AK2P54819 239 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 ANKRD18AQ8IVF6 992 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 EAF2Q96CJ1 260 aaPredicted RBP11.2□□□□□ -0.62
SS18L1-201ENST00000331758 WDR17Q8IZU2 1322 aa11.2□□□□□ -0.62
SS18L1-201ENST00000331758 GOLGA8BA8MQT2 603 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 LETM1O95202 739 aaPredicted RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CREB3L3Q68CJ9 461 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 HOOK1Q9UJC3 728 aaKnown RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 PTPRUQ92729 1446 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 SGSM2O43147 1006 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 DZIP1Q86YF9 867 aaKnown RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 NLRP3Q96P20 1036 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CARD10Q9BWT7 1032 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 SPATA31A3Q5VYP0 1347 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 USP31Q70CQ4 1352 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CYP27B1O15528 508 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 RANBP6O60518 1105 aaKnown RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CDKL5O76039 1030 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CLSTN1O94985 981 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 UQCRFS1P1P0C7P4 283 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC129Q6ZRS4 1044 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 MYO3AQ8NEV4 1616 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
SS18L1-201ENST00000331758 TRIM5Q9C035 493 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 KDRP35968 1356 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC171Q6TFL3 1326 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 ITGA6P23229 1130 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CAMK4Q16566 473 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CHST3Q7LGC8 479 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC144CPQ8IYA2 1237 aa11.19□□□□□ -0.62
SS18L1-201ENST00000331758 ZFYP08048 801 aaPredicted RBP11.18□□□□□ -0.62
SS18L1-201ENST00000331758 C6orf229H3BNL8 230 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC192P0DO97 292 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 RBM5P52756 815 aaKnown RBP eCLIP11.18□□□□□ -0.623e-10■■□□□ 12.2
SS18L1-201ENST00000331758 IKQ13123 557 aaPredicted RBP11.18□□□□□ -0.62
SS18L1-201ENST00000331758 SH3TC1Q8TE82 1336 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 USP5P45974 858 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 MICU3Q86XE3 530 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 C8orf76Q96K31 380 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 NUP62CLQ9H1M0 184 aa11.18□□□□□ -0.62
SS18L1-201ENST00000331758 RBM27Q9P2N5 1060 aaKnown RBP11.18□□□□□ -0.62
SS18L1-201ENST00000331758 SLC4A8Q2Y0W8 1093 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 JMYQ8N9B5 988 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 CDCA7Q9BWT1 371 aaPredicted RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 TCIRG1Q13488 830 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 ZNF219Q9P2Y4 722 aaPredicted RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 PTCH1Q13635 1447 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 PDIA4P13667 645 aaKnown RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 HMGN5P82970 282 aaKnown RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 SF3B2Q13435 895 aaKnown RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 Q6ZUG5 572 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 UNC5CLQ8IV45 518 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 PPLO60437 1756 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 NCOA7Q8NI08 942 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 SCAND2PQ9GZW5 306 aaPredicted RBP11.17□□□□□ -0.62
SS18L1-201ENST00000331758 FAM13BQ9NYF5 915 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 CDC42BPGQ6DT37 1551 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 SPATA31D1Q6ZQQ2 1576 aa11.17□□□□□ -0.62
SS18L1-201ENST00000331758 GNPATO15228 680 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 RNF113AO15541 343 aaKnown RBP11.16□□□□□ -0.62
SS18L1-201ENST00000331758 RTCBQ9Y3I0 505 aaKnown RBP11.16□□□□□ -0.62
SS18L1-201ENST00000331758 OVOS2A0A0J9YW53 1432 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 OVOS2Q6IE36 1432 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC24Q8N4L8 307 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 SPC24Q8NBT2 197 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 SLC12A7Q9Y666 1083 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 AOX1Q06278 1338 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 CYP7A1P22680 504 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 RAB3GAP1Q15042 981 aa11.16□□□□□ -0.62
SS18L1-201ENST00000331758 ORC3Q9UBD5 711 aaPredicted RBP11.16□□□□□ -0.62
SS18L1-201ENST00000331758 KLF18A0A0U1RQI7 1052 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC173Q0VFZ6 552 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 TMEM67Q5HYA8 995 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 ZSCAN29Q8IWY8 852 aaPredicted RBP11.15□□□□□ -0.62
SS18L1-201ENST00000331758 NAT10Q9H0A0 1025 aaKnown RBP11.15□□□□□ -0.62
SS18L1-201ENST00000331758 MKNK2Q9HBH9 465 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 POLR3DP05423 398 aaPredicted RBP11.15□□□□□ -0.62
SS18L1-201ENST00000331758 ZSCAN22P10073 491 aaPredicted RBP11.15□□□□□ -0.62
SS18L1-201ENST00000331758 MCM5P33992 734 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms