RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 WWC1Q8IX03 1113 aa17.54■□□□□ 0.4
GTF3C6-201ENST00000329970 PHAXQ9H814 394 aaKnown RBP17.54■□□□□ 0.4
GTF3C6-201ENST00000329970 CREBZFQ9NS37 354 aa17.54■□□□□ 0.4
GTF3C6-201ENST00000329970 ATP5J2-PTCD1G3V325 749 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 PPIP5K2O43314 1243 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 HSP90B1P14625 803 aaKnown RBP17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 DPP8Q6V1X1 898 aaPredicted RBP17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 MPNDQ8N594 471 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 CCDC191Q8NCU4 936 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
GTF3C6-201ENST00000329970 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
GTF3C6-201ENST00000329970 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
GTF3C6-201ENST00000329970 ANP32CO43423 234 aa17.52■□□□□ 0.4
GTF3C6-201ENST00000329970 DDX58O95786 925 aaKnown RBP17.52■□□□□ 0.4
GTF3C6-201ENST00000329970 KIAA2012Q0VF49 1180 aa17.52■□□□□ 0.4
GTF3C6-201ENST00000329970 TRPM7Q96QT4 1865 aa17.52■□□□□ 0.39
GTF3C6-201ENST00000329970 IRS4O14654 1257 aaPredicted RBP17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 SCNN1DP51172 638 aa17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 AOC3Q16853 763 aa17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 TSPYL6Q8N831 410 aa17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 MRS2Q9HD23 443 aa17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 COL4A1P02462 1669 aa17.51■□□□□ 0.39
GTF3C6-201ENST00000329970 ITGBL1O95965 494 aaPredicted RBP17.5■□□□□ 0.39
GTF3C6-201ENST00000329970 PCCAP05165 728 aaPredicted RBP17.5■□□□□ 0.39
GTF3C6-201ENST00000329970 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
GTF3C6-201ENST00000329970 METTL22Q9BUU2 404 aaPredicted RBP17.5■□□□□ 0.39
GTF3C6-201ENST00000329970 ZNRF3Q9ULT6 936 aa17.5■□□□□ 0.39
GTF3C6-201ENST00000329970 CDHR2Q9BYE9 1310 aa17.49■□□□□ 0.39
GTF3C6-201ENST00000329970 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
GTF3C6-201ENST00000329970 MYD88Q99836 296 aa17.49■□□□□ 0.39
GTF3C6-201ENST00000329970 GJA3Q9Y6H8 435 aa17.49■□□□□ 0.39
GTF3C6-201ENST00000329970 KSR2Q6VAB6 950 aa17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 USP50Q70EL3 339 aaPredicted RBP17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 TSR2Q969E8 191 aaKnown RBP17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 PSME4Q14997 1843 aa17.48■□□□□ 0.39
GTF3C6-201ENST00000329970 CXCL9Q07325 125 aa17.47■□□□□ 0.39
GTF3C6-201ENST00000329970 TWISTNBQ3B726 338 aaPredicted RBP17.47■□□□□ 0.39
GTF3C6-201ENST00000329970 IFFO2Q5TF58 517 aa17.47■□□□□ 0.39
GTF3C6-201ENST00000329970 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
GTF3C6-201ENST00000329970 STK31Q9BXU1 1019 aa17.47■□□□□ 0.39
GTF3C6-201ENST00000329970 CNTNAP1P78357 1384 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 PDE8AO60658 829 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 EPS15P42566 896 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 RPS8P62241 208 aaKnown RBP17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 CNTROBQ8N137 903 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 GPRC5DQ9NZD1 345 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 CLEC11AQ9Y240 323 aa17.46■□□□□ 0.39
GTF3C6-201ENST00000329970 TMEM88BA6NKF7 163 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 TNIP1Q15025 636 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 CCDC152Q4G0S7 254 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 CIAPIN1Q6FI81 312 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
GTF3C6-201ENST00000329970 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 RTL5Q5HYW3 569 aaPredicted RBP17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 ZNF428Q96B54 188 aa17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 ADARB2Q9NS39 739 aaKnown RBP17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 SCN9AQ15858 1988 aa17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 FANCIQ9NVI1 1328 aa17.44■□□□□ 0.38
GTF3C6-201ENST00000329970 SPEF2Q9C093 1822 aa17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 IGKV5-2P06315 115 aa17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 NEXNQ0ZGT2 675 aa17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 WASHC4Q2M389 1173 aa17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 MAP1SQ66K74 1059 aaPredicted RBP17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 EYA3Q99504 573 aa17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
GTF3C6-201ENST00000329970 YDJCA8MPS7 323 aa17.42■□□□□ 0.38
GTF3C6-201ENST00000329970 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
GTF3C6-201ENST00000329970 GPSM2P81274 684 aa17.42■□□□□ 0.38
GTF3C6-201ENST00000329970 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
GTF3C6-201ENST00000329970 PGAP2Q9UHJ9 254 aa17.42■□□□□ 0.38
GTF3C6-201ENST00000329970 RTL9Q8NET4 1388 aa17.41■□□□□ 0.38
GTF3C6-201ENST00000329970 GMPSP49915 693 aaPredicted RBP17.41■□□□□ 0.38
GTF3C6-201ENST00000329970 TBC1D16Q8TBP0 767 aa17.41■□□□□ 0.38
GTF3C6-201ENST00000329970 DPF2Q92785 391 aa17.41■□□□□ 0.38
GTF3C6-201ENST00000329970 SEC31BQ9NQW1 1179 aa17.41■□□□□ 0.38
GTF3C6-201ENST00000329970 THSD7BQ9C0I4 1608 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 ZNF609O15014 1411 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 RASSF10A6NK89 507 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 NEURL1BA8MQ27 555 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 VAMP4O75379 141 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 FLIIQ13045 1269 aa17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 ZC3H15Q8WU90 426 aaKnown RBP17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 MKRN1Q9UHC7 482 aaKnown RBP17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 POLR2AP24928 1970 aaKnown RBP17.4■□□□□ 0.38
GTF3C6-201ENST00000329970 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 RAD17O75943 681 aa17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 HSPA1AP0DMV8 641 aaKnown RBP17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 HSPA1BP0DMV9 641 aaKnown RBP17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 CTSWP56202 376 aa17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 G2E3Q7L622 706 aa17.39■□□□□ 0.37
GTF3C6-201ENST00000329970 H7C1W4 665 aa17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
GTF3C6-201ENST00000329970 ANKRD18AQ8IVF6 992 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms