RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 SART3Q15020 963 aaKnown RBP8.8□□□□□ -1
TRIM49-201ENST00000329758 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
TRIM49-201ENST00000329758 TMCO3Q6UWJ1 677 aa8.8□□□□□ -1
TRIM49-201ENST00000329758 C16orf71Q8IYS4 520 aaPredicted RBP8.8□□□□□ -1
TRIM49-201ENST00000329758 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 WDR33Q9C0J8 1336 aaKnown RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 GADD45BO75293 160 aaPredicted RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 CDC25BP30305 580 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 SSR1P43307 286 aaKnown RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 PLCB2Q00722 1185 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 PTPN14Q15678 1187 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 LEKR1Q6ZMV7 388 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 CCDC186Q7Z3E2 898 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 NBPF11Q86T75 865 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 JMYQ8N9B5 988 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 FAM200AQ8TCP9 573 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 SGSM3Q96HU1 749 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 MEIS3Q99687 375 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 L2HGDHQ9H9P8 463 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 NFAT5O94916 1531 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 IRF6O14896 467 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 SMARCA5O60264 1052 aaPredicted RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 OAS2P29728 719 aaKnown RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 ST5P78524 1137 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 C11orf91Q3C1V1 193 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 USP48Q86UV5 1035 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 IL17REQ8NFR9 667 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 RNF217Q8TC41 542 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 OTUD7AQ8TE49 926 aaPredicted RBP8.79□□□□□ -1
TRIM49-201ENST00000329758 TBC1D22AQ8WUA7 517 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 ZNF428Q96B54 188 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 NBPF4Q96M43 638 aa8.79□□□□□ -1
TRIM49-201ENST00000329758 ARHGEF10O15013 1369 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 MSH6P52701 1360 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 TUBB4AP04350 444 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 CCDC192P0DO97 292 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 CORO7P57737 925 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 ZRSR1Q15695 479 aaKnown RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 FAM43BQ6ZT52 329 aaPredicted RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 EFCAB13Q8IY85 973 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 ZSCAN16Q9H4T2 348 aaPredicted RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.78□□□□□ -1
TRIM49-201ENST00000329758 RGS12O14924 1447 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 LMTK3Q96Q04 1460 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 EIF3CLB5ME19 914 aaKnown RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 TPM1P09493 284 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 USP8P40818 1118 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 ZKSCAN8Q15776 578 aaPredicted RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 PLA2G4DQ86XP0 818 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 ZNF592Q92610 1267 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 EIF3CQ99613 913 aaKnown RBP8.78□□□□□ -1
TRIM49-201ENST00000329758 LGR6Q9HBX8 967 aa8.78□□□□□ -1
TRIM49-201ENST00000329758 KIF1AQ12756 1690 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 POLR3GO15318 223 aaPredicted RBP8.77□□□□□ -1.01
TRIM49-201ENST00000329758 KCNQ3O43525 872 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 LIG1P18858 919 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 LRMPQ12912 555 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 CASC1Q6TDU7 716 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 REXO1L1PQ8IX06 675 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 ARHGAP45Q92619 1136 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
TRIM49-201ENST00000329758 RGPD5Q99666 1765 aa8.77□□□□□ -1.01
TRIM49-201ENST00000329758 KLHL33A6NCF5 533 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 TTC36A6NLP5 189 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 ANXA1P04083 346 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 SEMA3FQ13275 785 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 TMX3Q96JJ7 454 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 API5Q9BZZ5 524 aaKnown RBP8.76□□□□□ -1.01
TRIM49-201ENST00000329758 SH3BP1Q9Y3L3 701 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 PHRF1Q9P1Y6 1649 aaKnown RBP8.76□□□□□ -1.01
TRIM49-201ENST00000329758 ALS2Q96Q42 1657 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 GNAT3A8MTJ3 354 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 SGSM2O43147 1006 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 C21orf2O43822 256 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 ZNF75DP51815 510 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 DNAJC21Q5F1R6 531 aaKnown RBP8.76□□□□□ -1.01
TRIM49-201ENST00000329758 STAG1Q8WVM7 1258 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 FAM107BQ9H098 131 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 KDRP35968 1356 aa8.76□□□□□ -1.01
TRIM49-201ENST00000329758 KDM4FA0A1W2PPD8 638 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 EIF2S2P20042 333 aaKnown RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 ZC3H6P61129 1189 aaKnown RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 MAP9Q49MG5 647 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 FOXD4L5Q5VV16 416 aaPredicted RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 NBPF5PQ86XG9 351 aaPredicted RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 DRC7Q8IY82 874 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 FOXD4L4Q8WXT5 416 aaPredicted RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 EXOC6BQ9Y2D4 811 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 AXIN2Q9Y2T1 843 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 GSPT1P15170 499 aaKnown RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 LMAN1P49257 510 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 SMC1AQ14683 1233 aaKnown RBP8.75□□□□□ -1.01
TRIM49-201ENST00000329758 E2F4Q16254 413 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 ERCC6LQ2NKX8 1250 aa8.75□□□□□ -1.01
TRIM49-201ENST00000329758 ARHGAP29Q52LW3 1261 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms