RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 EPS15P42566 896 aa18.26■□□□□ 0.51
RPAIN-201ENST00000327154 MKRN1Q9UHC7 482 aaKnown RBP18.26■□□□□ 0.51
RPAIN-201ENST00000327154 IRS4O14654 1257 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-201ENST00000327154 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
RPAIN-201ENST00000327154 MAP1SQ66K74 1059 aaPredicted RBP18.25■□□□□ 0.51
RPAIN-201ENST00000327154 CNTROBQ8N137 903 aa18.25■□□□□ 0.51
RPAIN-201ENST00000327154 TSPYL6Q8N831 410 aa18.25■□□□□ 0.51
RPAIN-201ENST00000327154 ZNRF3Q9ULT6 936 aa18.25■□□□□ 0.51
RPAIN-201ENST00000327154 SCN4AP35499 1836 aa18.25■□□□□ 0.51
RPAIN-201ENST00000327154 SCNN1DP51172 638 aa18.24■□□□□ 0.51
RPAIN-201ENST00000327154 CXCL9Q07325 125 aa18.24■□□□□ 0.51
RPAIN-201ENST00000327154 CCDC30Q5VVM6 783 aa18.24■□□□□ 0.51
RPAIN-201ENST00000327154 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
RPAIN-201ENST00000327154 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
RPAIN-201ENST00000327154 ANKRD36CQ5JPF3 1778 aa18.23■□□□□ 0.51
RPAIN-201ENST00000327154 KIAA2012Q0VF49 1180 aa18.23■□□□□ 0.51
RPAIN-201ENST00000327154 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
RPAIN-201ENST00000327154 TSR2Q969E8 191 aaKnown RBP18.23■□□□□ 0.51
RPAIN-201ENST00000327154 MYD88Q99836 296 aa18.23■□□□□ 0.51
RPAIN-201ENST00000327154 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
RPAIN-201ENST00000327154 TMEM88BA6NKF7 163 aa18.22■□□□□ 0.51
RPAIN-201ENST00000327154 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
RPAIN-201ENST00000327154 CCDC27Q2M243 656 aa18.21■□□□□ 0.51
RPAIN-201ENST00000327154 CCDC191Q8NCU4 936 aa18.21■□□□□ 0.51
RPAIN-201ENST00000327154 JARID2Q92833 1246 aaPredicted RBP18.21■□□□□ 0.51
RPAIN-201ENST00000327154 MRS2Q9HD23 443 aa18.21■□□□□ 0.51
RPAIN-201ENST00000327154 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
RPAIN-201ENST00000327154 RAD17O75943 681 aa18.2■□□□□ 0.5
RPAIN-201ENST00000327154 DDX58O95786 925 aaKnown RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 USP50Q70EL3 339 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 METTL22Q9BUU2 404 aaPredicted RBP18.2■□□□□ 0.5
RPAIN-201ENST00000327154 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
RPAIN-201ENST00000327154 ANP32CO43423 234 aa18.19■□□□□ 0.5
RPAIN-201ENST00000327154 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
RPAIN-201ENST00000327154 GPSM2P81274 684 aa18.19■□□□□ 0.5
RPAIN-201ENST00000327154 TNIP1Q15025 636 aa18.19■□□□□ 0.5
RPAIN-201ENST00000327154 CIAPIN1Q6FI81 312 aa18.19■□□□□ 0.5
RPAIN-201ENST00000327154 CWC25Q9NXE8 425 aaPredicted RBP18.19■□□□□ 0.5
RPAIN-201ENST00000327154 LAMB2P55268 1798 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-201ENST00000327154 HSP90B1P14625 803 aaKnown RBP18.18■□□□□ 0.5
RPAIN-201ENST00000327154 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 SEC31BQ9NQW1 1179 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 MAP3K2Q9Y2U5 619 aa18.18■□□□□ 0.5
RPAIN-201ENST00000327154 CNTNAP1P78357 1384 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 FMR1Q06787 632 aaKnown RBP eCLIP18.17■□□□□ 0.5
RPAIN-201ENST00000327154 TWISTNBQ3B726 338 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-201ENST00000327154 KSR2Q6VAB6 950 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 STK31Q9BXU1 1019 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 ADARB2Q9NS39 739 aaKnown RBP18.17■□□□□ 0.5
RPAIN-201ENST00000327154 SALL2Q9Y467 1007 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-201ENST00000327154 ADAMTSL1Q8N6G6 1762 aa18.17■□□□□ 0.5
RPAIN-201ENST00000327154 PCNTO95613 3336 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 LTBP1Q14766 1721 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 PDE8AO60658 829 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 VEGFBP49765 207 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
RPAIN-201ENST00000327154 TAF1P21675 1872 aa18.16■□□□□ 0.5
RPAIN-201ENST00000327154 SLC4A2P04920 1241 aa18.15■□□□□ 0.5
RPAIN-201ENST00000327154 CCDC152Q4G0S7 254 aa18.15■□□□□ 0.5
RPAIN-201ENST00000327154 G2E3Q7L622 706 aa18.15■□□□□ 0.5
RPAIN-201ENST00000327154 DBNDD1Q9H9R9 158 aa18.15■□□□□ 0.5
RPAIN-201ENST00000327154 IL16Q14005 1332 aa18.15■□□□□ 0.5
RPAIN-201ENST00000327154 DDX60Q8IY21 1712 aaKnown RBP18.15■□□□□ 0.5
RPAIN-201ENST00000327154 TRAF5O00463 557 aa18.14■□□□□ 0.49
RPAIN-201ENST00000327154 IGKV5-2P06315 115 aa18.14■□□□□ 0.49
RPAIN-201ENST00000327154 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
RPAIN-201ENST00000327154 DEFB115Q30KQ5 88 aa18.14■□□□□ 0.49
RPAIN-201ENST00000327154 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
RPAIN-201ENST00000327154 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
RPAIN-201ENST00000327154 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
RPAIN-201ENST00000327154 CNOT7Q9UIV1 285 aaKnown RBP18.14■□□□□ 0.49
RPAIN-201ENST00000327154 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
RPAIN-201ENST00000327154 EYA3Q99504 573 aa18.13■□□□□ 0.49
RPAIN-201ENST00000327154 ANKIB1Q9P2G1 1089 aa18.13■□□□□ 0.49
RPAIN-201ENST00000327154 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
RPAIN-201ENST00000327154 DUOX1Q9NRD9 1551 aa18.13■□□□□ 0.49
RPAIN-201ENST00000327154 COL4A1P02462 1669 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 SHTN1A0MZ66 631 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 RASSF10A6NK89 507 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 PSMD14O00487 310 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 HIRAP54198 1017 aaPredicted RBP18.12■□□□□ 0.49
RPAIN-201ENST00000327154 NEXNQ0ZGT2 675 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 CST9Q5W186 159 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 ZC3H12CQ9C0D7 883 aaKnown RBP18.12■□□□□ 0.49
RPAIN-201ENST00000327154 KCNQ5Q9NR82 932 aa18.12■□□□□ 0.49
RPAIN-201ENST00000327154 H7C1D1 291 aa18.11■□□□□ 0.49
RPAIN-201ENST00000327154 ECE2O60344 883 aa18.11■□□□□ 0.49
RPAIN-201ENST00000327154 CWF19L2Q2TBE0 894 aaKnown RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms