RNA–Protein interactions for RNA: ENST00000326407.10

ITM2C-201, Transcript of integral membrane protein 2C, humanhuman

TSL 1 (best) BASIC

Gene ITM2C, Length 1,888 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2C-201ENST00000326407 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
ITM2C-201ENST00000326407 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
ITM2C-201ENST00000326407 KAZALD1Q96I82 304 aa20.05■□□□□ 0.8
ITM2C-201ENST00000326407 TTC14Q96N46 770 aa20.04■□□□□ 0.8
ITM2C-201ENST00000326407 LY75O60449 1722 aa20.04■□□□□ 0.8
ITM2C-201ENST00000326407 CCDC173Q0VFZ6 552 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 AACSQ86V21 672 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 MBD3O95983 291 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 CLCN1P35523 988 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 TRIM44Q96DX7 344 aaPredicted RBP20.03■□□□□ 0.8
ITM2C-201ENST00000326407 CHAMP1Q96JM3 812 aa20.03■□□□□ 0.8
ITM2C-201ENST00000326407 RGPD3A6NKT7 1758 aaPredicted RBP20.02■□□□□ 0.8
ITM2C-201ENST00000326407 RGPD4Q7Z3J3 1758 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 ZNF831Q5JPB2 1677 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 BAG6P46379 1132 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 SLC27A3Q5K4L6 730 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 RASEFQ8IZ41 740 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 PROM2Q8N271 834 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 EVI5LQ96CN4 794 aa20.02■□□□□ 0.8
ITM2C-201ENST00000326407 ERBB4Q15303 1308 aa20.02■□□□□ 0.79
ITM2C-201ENST00000326407 WDR33Q9C0J8 1336 aaKnown RBP20.02■□□□□ 0.79
ITM2C-201ENST00000326407 ATP6V1AP38606 617 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 TXNRD1Q16881 649 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 ANP32BQ92688 251 aaKnown RBP20.01■□□□□ 0.79
ITM2C-201ENST00000326407 CAMKK2Q96RR4 588 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 PPP1R9BQ96SB3 815 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 SIL1Q9H173 461 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 RBM27Q9P2N5 1060 aaKnown RBP20.01■□□□□ 0.79
ITM2C-201ENST00000326407 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
ITM2C-201ENST00000326407 SASH1O94885 1247 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 PLBD2Q8NHP8 589 aa20.01■□□□□ 0.79
ITM2C-201ENST00000326407 TEX13AQ9BXU3 409 aaPredicted RBP20.01■□□□□ 0.79
ITM2C-201ENST00000326407 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
ITM2C-201ENST00000326407 ITPK1Q13572 414 aa20■□□□□ 0.79
ITM2C-201ENST00000326407 CICQ96RK0 1608 aaPredicted RBP20■□□□□ 0.79
ITM2C-201ENST00000326407 RPAP1Q9BWH6 1393 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-201ENST00000326407 ESPNB1AK53 854 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 ATP5J2-PTCD1G3V325 749 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 AK2P54819 239 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 JARID2Q92833 1246 aaPredicted RBP19.99■□□□□ 0.79
ITM2C-201ENST00000326407 LRRC4BQ9NT99 713 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 LIMCH1Q9UPQ0 1083 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 HIP1O00291 1037 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 UBE3BQ7Z3V4 1068 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 DEFB132Q7Z7B7 95 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 KCNB2Q92953 911 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 TMEM63CQ9P1W3 806 aa19.99■□□□□ 0.79
ITM2C-201ENST00000326407 NUP188Q5SRE5 1749 aa19.98■□□□□ 0.79
ITM2C-201ENST00000326407 KCNQ4P56696 695 aa19.98■□□□□ 0.79
ITM2C-201ENST00000326407 PTH1RQ03431 593 aa19.98■□□□□ 0.79
ITM2C-201ENST00000326407 EPHA10Q5JZY3 1008 aa19.98■□□□□ 0.79
ITM2C-201ENST00000326407 RUFY3Q7L099 469 aa19.98■□□□□ 0.79
ITM2C-201ENST00000326407 EAF2Q96CJ1 260 aaPredicted RBP19.98■□□□□ 0.79
ITM2C-201ENST00000326407 TJP1Q07157 1748 aa19.97■□□□□ 0.79
ITM2C-201ENST00000326407 A0A087WZG4 1122 aa19.97■□□□□ 0.79
ITM2C-201ENST00000326407 CASTP20810 708 aaKnown RBP19.97■□□□□ 0.79
ITM2C-201ENST00000326407 EZH2Q15910 746 aaKnown RBP19.97■□□□□ 0.79
ITM2C-201ENST00000326407 KLHDC4Q8TBB5 520 aa19.97■□□□□ 0.79
ITM2C-201ENST00000326407 ANO8Q9HCE9 1232 aaPredicted RBP19.97■□□□□ 0.79
ITM2C-201ENST00000326407 CCDC171Q6TFL3 1326 aa19.97■□□□□ 0.79
ITM2C-201ENST00000326407 NBPF26B4DH59 902 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 STARD3NLO95772 234 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 NBPF14Q5TI25 921 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 NBPF10Q6P3W6 841 aaKnown RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 LRSAM1Q6UWE0 723 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 NBPF15Q8N660 670 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 TM6SF1Q9BZW5 370 aa19.96■□□□□ 0.79
ITM2C-201ENST00000326407 NSFL1CQ9UNZ2 370 aaKnown RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 CCDC8Q9H0W5 538 aaPredicted RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.96■□□□□ 0.79
ITM2C-201ENST00000326407 VPS53Q5VIR6 699 aa19.95■□□□□ 0.78
ITM2C-201ENST00000326407 PRPF40BQ6NWY9 871 aaKnown RBP19.95■□□□□ 0.78
ITM2C-201ENST00000326407 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
ITM2C-201ENST00000326407 RBSNQ9H1K0 784 aa19.95■□□□□ 0.78
ITM2C-201ENST00000326407 A1BGP04217 495 aa19.94■□□□□ 0.78
ITM2C-201ENST00000326407 JAKMIP1Q96N16 626 aaKnown RBP19.94■□□□□ 0.78
ITM2C-201ENST00000326407 SNRKQ9NRH2 765 aa19.94■□□□□ 0.78
ITM2C-201ENST00000326407 COL15A1P39059 1388 aa19.94■□□□□ 0.78
ITM2C-201ENST00000326407 ZSWIM6Q9HCJ5 1215 aa19.94■□□□□ 0.78
ITM2C-201ENST00000326407 TLR7Q9NYK1 1049 aaKnown RBP19.94■□□□□ 0.78
ITM2C-201ENST00000326407 COL5A3P25940 1745 aaPredicted RBP19.93■□□□□ 0.78
ITM2C-201ENST00000326407 SYCE3A1L190 88 aa19.93■□□□□ 0.78
ITM2C-201ENST00000326407 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
ITM2C-201ENST00000326407 NECTIN1Q15223 517 aa19.93■□□□□ 0.78
ITM2C-201ENST00000326407 TTLL7Q6ZT98 887 aa19.93■□□□□ 0.78
ITM2C-201ENST00000326407 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
ITM2C-201ENST00000326407 PDRG1Q9NUG6 133 aa19.93■□□□□ 0.78
ITM2C-201ENST00000326407 CYP46A1Q9Y6A2 500 aa19.93■□□□□ 0.78
ITM2C-201ENST00000326407 TAF1LQ8IZX4 1826 aa19.92■□□□□ 0.78
ITM2C-201ENST00000326407 ZSCAN22P10073 491 aaPredicted RBP19.92■□□□□ 0.78
ITM2C-201ENST00000326407 RC3H1Q5TC82 1133 aaKnown RBP19.92■□□□□ 0.78
ITM2C-201ENST00000326407 TMEM87AQ8NBN3 555 aa19.92■□□□□ 0.78
ITM2C-201ENST00000326407 COPRSQ9NQ92 184 aa19.92■□□□□ 0.78
ITM2C-201ENST00000326407 SMC3Q9UQE7 1217 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms