RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 MAP3K2Q9Y2U5 619 aa27.35■■□□□ 1.97
UBE2D3-201ENST00000321805 PCCAP05165 728 aaPredicted RBP27.34■■□□□ 1.97
UBE2D3-201ENST00000321805 ZNF541Q9H0D2 1346 aa27.34■■□□□ 1.97
UBE2D3-201ENST00000321805 PI4KAP2A4QPH2 592 aa27.33■■□□□ 1.97
UBE2D3-201ENST00000321805 TCERG1O14776 1098 aaKnown RBP27.33■■□□□ 1.97
UBE2D3-201ENST00000321805 PI4KAP1Q8N8J0 262 aa27.33■■□□□ 1.97
UBE2D3-201ENST00000321805 SLC4A2P04920 1241 aa27.32■■□□□ 1.96
UBE2D3-201ENST00000321805 NEXNQ0ZGT2 675 aa27.32■■□□□ 1.96
UBE2D3-201ENST00000321805 LARGE2Q8N3Y3 721 aa27.32■■□□□ 1.96
UBE2D3-201ENST00000321805 COL4A5P29400 1685 aa27.31■■□□□ 1.96
UBE2D3-201ENST00000321805 DPP8Q6V1X1 898 aaPredicted RBP27.31■■□□□ 1.96
UBE2D3-201ENST00000321805 GPC2Q8N158 579 aa27.31■■□□□ 1.96
UBE2D3-201ENST00000321805 ZNF428Q96B54 188 aa27.31■■□□□ 1.96
UBE2D3-201ENST00000321805 TAF1P21675 1872 aa27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 VAMP4O75379 141 aa27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 EIF6P56537 245 aaKnown RBP27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 RTL5Q5HYW3 569 aaPredicted RBP27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 MPNDQ8N594 471 aa27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 CDHR2Q9BYE9 1310 aa27.3■■□□□ 1.96
UBE2D3-201ENST00000321805 PPIP5K2O43314 1243 aa27.29■■□□□ 1.96
UBE2D3-201ENST00000321805 FLIIQ13045 1269 aa27.29■■□□□ 1.96
UBE2D3-201ENST00000321805 SLC51AQ86UW1 340 aa27.29■■□□□ 1.96
UBE2D3-201ENST00000321805 NIM1KQ8IY84 436 aa27.29■■□□□ 1.96
UBE2D3-201ENST00000321805 ZNF521Q96K83 1311 aa27.28■■□□□ 1.96
UBE2D3-201ENST00000321805 PDE8AO60658 829 aa27.28■■□□□ 1.96
UBE2D3-201ENST00000321805 IGKV5-2P06315 115 aa27.27■■□□□ 1.96
UBE2D3-201ENST00000321805 G2E3Q7L622 706 aa27.27■■□□□ 1.96
UBE2D3-201ENST00000321805 SPINK5Q9NQ38 1064 aaPredicted RBP27.27■■□□□ 1.96
UBE2D3-201ENST00000321805 CCDC152Q4G0S7 254 aa27.26■■□□□ 1.95
UBE2D3-201ENST00000321805 CELF1Q92879 486 aaKnown RBP27.26■■□□□ 1.95
UBE2D3-201ENST00000321805 TAF1DQ9H5J8 278 aaPredicted RBP27.26■■□□□ 1.95
UBE2D3-201ENST00000321805 HACL1Q9UJ83 578 aa27.26■■□□□ 1.95
UBE2D3-201ENST00000321805 DUOX1Q9NRD9 1551 aa27.26■■□□□ 1.95
UBE2D3-201ENST00000321805 KIAA2012Q0VF49 1180 aa27.25■■□□□ 1.95
UBE2D3-201ENST00000321805 AOC3Q16853 763 aa27.25■■□□□ 1.95
UBE2D3-201ENST00000321805 NEURL1BA8MQ27 555 aa27.24■■□□□ 1.95
UBE2D3-201ENST00000321805 FKBP5Q13451 457 aaPredicted RBP27.24■■□□□ 1.95
UBE2D3-201ENST00000321805 MYH3P11055 1940 aa27.24■■□□□ 1.95
UBE2D3-201ENST00000321805 RPS8P62241 208 aaKnown RBP27.23■■□□□ 1.95
UBE2D3-201ENST00000321805 CHADLQ6NUI6 762 aa27.23■■□□□ 1.95
UBE2D3-201ENST00000321805 LDHDQ86WU2 507 aa27.23■■□□□ 1.95
UBE2D3-201ENST00000321805 CCER2I3L3R5 266 aa27.22■■□□□ 1.95
UBE2D3-201ENST00000321805 PNMA8AQ86V59 439 aaPredicted RBP27.22■■□□□ 1.95
UBE2D3-201ENST00000321805 DNAAF4Q8WXU2 420 aa27.22■■□□□ 1.95
UBE2D3-201ENST00000321805 ZNRF3Q9ULT6 936 aa27.22■■□□□ 1.95
UBE2D3-201ENST00000321805 LTBP1Q14766 1721 aa27.21■■□□□ 1.95
UBE2D3-201ENST00000321805 CWF19L2Q2TBE0 894 aaKnown RBP27.21■■□□□ 1.95
UBE2D3-201ENST00000321805 COL4A1P02462 1669 aa27.21■■□□□ 1.95
UBE2D3-201ENST00000321805 ADAMTSL1Q8N6G6 1762 aa27.2■■□□□ 1.95
UBE2D3-201ENST00000321805 EPHX2P34913 555 aa27.2■■□□□ 1.94
UBE2D3-201ENST00000321805 CTSWP56202 376 aa27.2■■□□□ 1.94
UBE2D3-201ENST00000321805 LINS1Q8NG48 757 aa27.2■■□□□ 1.94
UBE2D3-201ENST00000321805 LMOD1P29536 600 aaPredicted RBP27.19■■□□□ 1.94
UBE2D3-201ENST00000321805 NSFL1CQ9UNZ2 370 aaKnown RBP27.19■■□□□ 1.94
UBE2D3-201ENST00000321805 GJA3Q9Y6H8 435 aa27.19■■□□□ 1.94
UBE2D3-201ENST00000321805 RTL9Q8NET4 1388 aa27.19■■□□□ 1.94
UBE2D3-201ENST00000321805 H7C1W4 665 aa27.18■■□□□ 1.94
UBE2D3-201ENST00000321805 GCKRQ14397 625 aa27.18■■□□□ 1.94
UBE2D3-201ENST00000321805 DNAJC5GQ8N7S2 189 aa27.18■■□□□ 1.94
UBE2D3-201ENST00000321805 SEC31BQ9NQW1 1179 aa27.18■■□□□ 1.94
UBE2D3-201ENST00000321805 PODXL2Q9NZ53 605 aa27.18■■□□□ 1.94
UBE2D3-201ENST00000321805 POTEIP0CG38 1075 aa27.17■■□□□ 1.94
UBE2D3-201ENST00000321805 POTEJP0CG39 1038 aa27.17■■□□□ 1.94
UBE2D3-201ENST00000321805 CDC5LQ99459 802 aaKnown RBP27.17■■□□□ 1.94
UBE2D3-201ENST00000321805 E9PSI1 815 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 SCNN1DP51172 638 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 GPSM2P81274 684 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 WASHC4Q2M389 1173 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 JARID2Q92833 1246 aaPredicted RBP27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 EYA3Q99504 573 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 PLA2G12BQ9BX93 195 aa27.16■■□□□ 1.94
UBE2D3-201ENST00000321805 CXCL9Q07325 125 aa27.15■■□□□ 1.94
UBE2D3-201ENST00000321805 UBE3BQ7Z3V4 1068 aa27.15■■□□□ 1.94
UBE2D3-201ENST00000321805 ANKRD18AQ8IVF6 992 aa27.15■■□□□ 1.94
UBE2D3-201ENST00000321805 TTLL11Q8NHH1 800 aa27.15■■□□□ 1.94
UBE2D3-201ENST00000321805 TNIP1Q15025 636 aa27.14■■□□□ 1.94
UBE2D3-201ENST00000321805 EAPPQ56P03 285 aaPredicted RBP27.14■■□□□ 1.94
UBE2D3-201ENST00000321805 CIAPIN1Q6FI81 312 aa27.14■■□□□ 1.94
UBE2D3-201ENST00000321805 C6orf229H3BNL8 230 aa27.13■■□□□ 1.93
UBE2D3-201ENST00000321805 TBC1D16Q8TBP0 767 aa27.13■■□□□ 1.93
UBE2D3-201ENST00000321805 POLLQ9UGP5 575 aa27.13■■□□□ 1.93
UBE2D3-201ENST00000321805 CASP7P55210 303 aa27.12■■□□□ 1.93
UBE2D3-201ENST00000321805 KLRG1Q96E93 195 aa27.12■■□□□ 1.93
UBE2D3-201ENST00000321805 USP50Q70EL3 339 aaPredicted RBP27.11■■□□□ 1.93
UBE2D3-201ENST00000321805 CCDC85AQ96PX6 553 aaPredicted RBP27.11■■□□□ 1.93
UBE2D3-201ENST00000321805 GPRC5DQ9NZD1 345 aa27.11■■□□□ 1.93
UBE2D3-201ENST00000321805 PASKQ96RG2 1323 aa27.11■■□□□ 1.93
UBE2D3-201ENST00000321805 BEND3Q5T5X7 828 aa27.1■■□□□ 1.93
UBE2D3-201ENST00000321805 GREM2Q9H772 168 aa27.1■■□□□ 1.93
UBE2D3-201ENST00000321805 ANKIB1Q9P2G1 1089 aa27.1■■□□□ 1.93
UBE2D3-201ENST00000321805 GGA1Q9UJY5 639 aa27.1■■□□□ 1.93
UBE2D3-201ENST00000321805 XDHP47989 1333 aa27.1■■□□□ 1.93
UBE2D3-201ENST00000321805 YDJCA8MPS7 323 aa27.09■■□□□ 1.93
UBE2D3-201ENST00000321805 HTRA3P83110 453 aa27.09■■□□□ 1.93
UBE2D3-201ENST00000321805 BSDC1Q9NW68 430 aaPredicted RBP27.09■■□□□ 1.93
UBE2D3-201ENST00000321805 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
UBE2D3-201ENST00000321805 UFL1O94874 794 aa27.08■■□□□ 1.93
UBE2D3-201ENST00000321805 EPS15P42566 896 aa27.08■■□□□ 1.93
UBE2D3-201ENST00000321805 SLFN5Q08AF3 891 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms