RNA–Protein interactions for RNA: ENST00000321407.2

GCC1-201, Transcript of GRIP and coiled-coil domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCC1, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCC1-201ENST00000321407 RNF123Q5XPI4 1314 aa17.3■□□□□ 0.36
GCC1-201ENST00000321407 KRT32Q14532 448 aa17.3■□□□□ 0.36
GCC1-201ENST00000321407 CCAR1Q8IX12 1150 aaKnown RBP17.3■□□□□ 0.36
GCC1-201ENST00000321407 NEXMIFQ5QGS0 1516 aa17.3■□□□□ 0.36
GCC1-201ENST00000321407 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
GCC1-201ENST00000321407 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
GCC1-201ENST00000321407 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.29■□□□□ 0.36
GCC1-201ENST00000321407 RIMS1Q86UR5 1692 aaKnown RBP17.29■□□□□ 0.36
GCC1-201ENST00000321407 PDCP20941 246 aa17.29■□□□□ 0.36
GCC1-201ENST00000321407 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
GCC1-201ENST00000321407 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
GCC1-201ENST00000321407 PAG1Q9NWQ8 432 aa17.29■□□□□ 0.36
GCC1-201ENST00000321407 IFIT3O14879 490 aaKnown RBP17.29■□□□□ 0.36
GCC1-201ENST00000321407 MICU3Q86XE3 530 aa17.29■□□□□ 0.36
GCC1-201ENST00000321407 NMIQ13287 307 aaPredicted RBP17.28■□□□□ 0.36
GCC1-201ENST00000321407 ANKRD1Q15327 319 aa17.28■□□□□ 0.36
GCC1-201ENST00000321407 STK38Q15208 465 aa17.28■□□□□ 0.36
GCC1-201ENST00000321407 STX8Q9UNK0 236 aa17.28■□□□□ 0.36
GCC1-201ENST00000321407 PDE8AO60658 829 aa17.28■□□□□ 0.36
GCC1-201ENST00000321407 POLD1P28340 1107 aa17.28■□□□□ 0.36
GCC1-201ENST00000321407 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
GCC1-201ENST00000321407 ZNF444Q8N0Y2 327 aaPredicted RBP17.28■□□□□ 0.36
GCC1-201ENST00000321407 FRMPD1Q5SYB0 1578 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 UFL1O94874 794 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 BAG6P46379 1132 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 CCDC129Q6ZRS4 1044 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 TBC1D2Q9BYX2 928 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 TTLL12Q14166 644 aaPredicted RBP17.27■□□□□ 0.36
GCC1-201ENST00000321407 PARP10Q53GL7 1025 aa17.27■□□□□ 0.36
GCC1-201ENST00000321407 GOLGA6L19H0YKK7 550 aa17.27■□□□□ 0.35
GCC1-201ENST00000321407 VSIG10Q8N0Z9 540 aa17.27■□□□□ 0.35
GCC1-201ENST00000321407 CCDC43Q96MW1 224 aaKnown RBP17.27■□□□□ 0.35
GCC1-201ENST00000321407 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.35
GCC1-201ENST00000321407 NECAB1Q8N987 351 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 RBM8AQ9Y5S9 174 aaKnown RBP17.26■□□□□ 0.35
GCC1-201ENST00000321407 VAT1LQ9HCJ6 419 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 ZNF521Q96K83 1311 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 CPA1P15085 419 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 BEND3Q5T5X7 828 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 SLC4A4Q9Y6R1 1079 aa17.26■□□□□ 0.35
GCC1-201ENST00000321407 RTL1A6NKG5 1358 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 TTF1Q15361 905 aaPredicted RBP17.25■□□□□ 0.35
GCC1-201ENST00000321407 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 TSPY2A6NKD2 308 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 TPM4P67936 248 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 PDE4CQ08493 712 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 ESYT1Q9BSJ8 1104 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.25■□□□□ 0.35
GCC1-201ENST00000321407 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 ME1P48163 572 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 BRF1Q92994 677 aa17.25■□□□□ 0.35
GCC1-201ENST00000321407 C8orf34Q49A92 452 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 TNNI3KQ59H18 835 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 FPGT-TNNI3KV9GXZ4 949 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 CDK12Q9NYV4 1490 aaPredicted RBP17.24■□□□□ 0.35
GCC1-201ENST00000321407 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 CCDC96Q2M329 555 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 LRRC24Q50LG9 513 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
GCC1-201ENST00000321407 XAGE2Q96GT9 111 aa17.23■□□□□ 0.35
GCC1-201ENST00000321407 BAG3O95817 575 aa17.23■□□□□ 0.35
GCC1-201ENST00000321407 ECM2O94769 699 aaPredicted RBP17.23■□□□□ 0.35
GCC1-201ENST00000321407 LDHCP07864 332 aa17.23■□□□□ 0.35
GCC1-201ENST00000321407 GDPD2Q9HCC8 539 aa17.23■□□□□ 0.35
GCC1-201ENST00000321407 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
GCC1-201ENST00000321407 PUS3Q9BZE2 481 aaKnown RBP17.23■□□□□ 0.35
GCC1-201ENST00000321407 WDR78Q5VTH9 848 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 QRICH2Q9H0J4 1663 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 MCM4P33991 863 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 SYNE4Q8N205 404 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 NOC3LQ8WTT2 800 aaKnown RBP17.22■□□□□ 0.35
GCC1-201ENST00000321407 NEK1Q96PY6 1258 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 GREM2Q9H772 168 aa17.22■□□□□ 0.35
GCC1-201ENST00000321407 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
GCC1-201ENST00000321407 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 PAXIP1Q6ZW49 1069 aaPredicted RBP17.21■□□□□ 0.35
GCC1-201ENST00000321407 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 ABCC4O15439 1325 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 MRE11P49959 708 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.35
GCC1-201ENST00000321407 MFSD6Q6ZSS7 791 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 OGFOD1Q8N543 542 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 CPS1P31327 1500 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 GRM1Q13255 1194 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 MPNDQ8N594 471 aa17.21■□□□□ 0.35
GCC1-201ENST00000321407 TRMT1LQ7Z2T5 733 aaKnown RBP17.2■□□□□ 0.34
GCC1-201ENST00000321407 TRMT2AQ8IZ69 625 aaKnown RBP17.2■□□□□ 0.34
GCC1-201ENST00000321407 KIAA2012Q0VF49 1180 aa17.2■□□□□ 0.34
GCC1-201ENST00000321407 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
GCC1-201ENST00000321407 EAF2Q96CJ1 260 aaPredicted RBP17.2■□□□□ 0.34
GCC1-201ENST00000321407 FEZ1Q99689 392 aa17.2■□□□□ 0.34
GCC1-201ENST00000321407 RPS8P62241 208 aaKnown RBP17.2■□□□□ 0.34
GCC1-201ENST00000321407 HOMER1Q86YM7 354 aa17.2■□□□□ 0.34
GCC1-201ENST00000321407 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms