RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ZNF277Q9NRM2 450 aaPredicted RBP18.65■□□□□ 0.58
TUBA3D-201ENST00000321253 DICER1Q9UPY3 1922 aaKnown RBP18.65■□□□□ 0.58
TUBA3D-201ENST00000321253 GCKRQ14397 625 aa18.64■□□□□ 0.58
TUBA3D-201ENST00000321253 CCDC152Q4G0S7 254 aa18.64■□□□□ 0.58
TUBA3D-201ENST00000321253 TMC4Q7Z404 712 aa18.64■□□□□ 0.58
TUBA3D-201ENST00000321253 UBE3BQ7Z3V4 1068 aa18.64■□□□□ 0.57
TUBA3D-201ENST00000321253 SP8Q8IXZ3 490 aa18.64■□□□□ 0.57
TUBA3D-201ENST00000321253 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 IARSP41252 1262 aaKnown RBP18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 DPY19L2Q6NUT2 758 aa18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 MRPL50Q8N5N7 158 aaKnown RBP18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
TUBA3D-201ENST00000321253 GLTPD2A6NH11 291 aa18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 ALDH1L2Q3SY69 923 aa18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 SLC4A10Q6U841 1118 aa18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 CELF1Q92879 486 aaKnown RBP18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 NMRK2Q9NPI5 230 aa18.62■□□□□ 0.57
TUBA3D-201ENST00000321253 TAF1P21675 1872 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 H7C1W4 665 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 CTSWP56202 376 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 BEND3Q5T5X7 828 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 DPP8Q6V1X1 898 aaPredicted RBP18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 SLC51AQ86UW1 340 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 CCDC85AQ96PX6 553 aaPredicted RBP18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 SMC4Q9NTJ3 1288 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 PTPRCP08575 1304 aa18.61■□□□□ 0.57
TUBA3D-201ENST00000321253 MPNDQ8N594 471 aa18.6■□□□□ 0.57
TUBA3D-201ENST00000321253 SUPT20HQ8NEM7 779 aa18.6■□□□□ 0.57
TUBA3D-201ENST00000321253 JDP2Q8WYK2 163 aa18.6■□□□□ 0.57
TUBA3D-201ENST00000321253 KIF3CO14782 793 aa18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 C1QTNF8P60827 252 aa18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 RPS8P62241 208 aaKnown RBP18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 SEC31BQ9NQW1 1179 aa18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 LARGE2Q8N3Y3 721 aa18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 SRCIN1Q9C0H9 1055 aa18.59■□□□□ 0.57
TUBA3D-201ENST00000321253 MYH3P11055 1940 aa18.58■□□□□ 0.57
TUBA3D-201ENST00000321253 ALDH1L1O75891 902 aa18.58■□□□□ 0.56
TUBA3D-201ENST00000321253 C16orf71Q8IYS4 520 aaPredicted RBP18.58■□□□□ 0.56
TUBA3D-201ENST00000321253 TTLL11Q8NHH1 800 aa18.58■□□□□ 0.56
TUBA3D-201ENST00000321253 RRAGCQ9HB90 399 aa18.58■□□□□ 0.56
TUBA3D-201ENST00000321253 LRRC37AA6NMS7 1700 aa18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 PPIP5K2O43314 1243 aa18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 ANKRD18AQ8IVF6 992 aa18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 CDC5LQ99459 802 aaKnown RBP18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 PLA2G12BQ9BX93 195 aa18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 RTFDC1Q9BY42 306 aaPredicted RBP18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 VPS33BQ9H267 617 aa18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 C9orf78Q9NZ63 289 aaPredicted RBP18.57■□□□□ 0.56
TUBA3D-201ENST00000321253 GRM8O00222 908 aa18.56■□□□□ 0.56
TUBA3D-201ENST00000321253 CASP7P55210 303 aa18.56■□□□□ 0.56
TUBA3D-201ENST00000321253 GREM2Q9H772 168 aa18.56■□□□□ 0.56
TUBA3D-201ENST00000321253 NSFL1CQ9UNZ2 370 aaKnown RBP18.56■□□□□ 0.56
TUBA3D-201ENST00000321253 VEGFAP15692 232 aaPredicted RBP18.55■□□□□ 0.56
TUBA3D-201ENST00000321253 AOC3Q16853 763 aa18.55■□□□□ 0.56
TUBA3D-201ENST00000321253 NIM1KQ8IY84 436 aa18.55■□□□□ 0.56
TUBA3D-201ENST00000321253 RTL9Q8NET4 1388 aa18.55■□□□□ 0.56
TUBA3D-201ENST00000321253 COL4A1P02462 1669 aa18.55■□□□□ 0.56
TUBA3D-201ENST00000321253 FZD9O00144 591 aa18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 DDNO94850 711 aaPredicted RBP18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 EIF6P56537 245 aaKnown RBP18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 ZBED9Q6R2W3 1325 aa18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 TOMM70O94826 608 aa18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 GPSM2P81274 684 aa18.54■□□□□ 0.56
TUBA3D-201ENST00000321253 C6orf229H3BNL8 230 aa18.53■□□□□ 0.56
TUBA3D-201ENST00000321253 RARSP54136 660 aaKnown RBP18.53■□□□□ 0.56
TUBA3D-201ENST00000321253 ANKIB1Q9P2G1 1089 aa18.53■□□□□ 0.56
TUBA3D-201ENST00000321253 WDR90Q96KV7 1748 aa18.53■□□□□ 0.56
TUBA3D-201ENST00000321253 COL4A5P29400 1685 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 CSF1RP07333 972 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 ITGA6P23229 1130 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 IGHMBP2P38935 993 aaKnown RBP18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 KIAA2012Q0VF49 1180 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 FAM161AQ3B820 660 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 NOB1Q9ULX3 412 aaKnown RBP18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 CHMP3Q9Y3E7 222 aa18.52■□□□□ 0.56
TUBA3D-201ENST00000321253 DUOX1Q9NRD9 1551 aa18.52■□□□□ 0.55
TUBA3D-201ENST00000321253 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
TUBA3D-201ENST00000321253 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
TUBA3D-201ENST00000321253 WASHC4Q2M389 1173 aa18.51■□□□□ 0.55
TUBA3D-201ENST00000321253 EYA3Q99504 573 aa18.51■□□□□ 0.55
TUBA3D-201ENST00000321253 IQCA1LA6NCM1 817 aa18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 GPC2Q8N158 579 aa18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 API5Q9BZZ5 524 aaKnown RBP18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 PODXL2Q9NZ53 605 aa18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 ZNRF3Q9ULT6 936 aa18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 XDHP47989 1333 aa18.5■□□□□ 0.55
TUBA3D-201ENST00000321253 ANKRD18BA2A2Z9 1011 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 UFL1O94874 794 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 FOXO4P98177 505 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 IFIT5Q13325 482 aaKnown RBP18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 MPHOSPH8Q99549 860 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 POLLQ9UGP5 575 aa18.49■□□□□ 0.55
TUBA3D-201ENST00000321253 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms