RNA–Protein interactions for RNA: ENST00000319406.8

LCLAT1-202, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2 BASIC

Gene LCLAT1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-202ENST00000319406 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
LCLAT1-202ENST00000319406 AFDNP55196 1824 aaKnown RBP12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 CASP7P55210 303 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 FAM184AQ8NB25 1140 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 SYAP1Q96A49 352 aaPredicted RBP12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 MYD88Q99836 296 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 COPRSQ9NQ92 184 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 JCADQ9P266 1359 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 CSB-PGBD3P0DP91 1061 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 ANKRD13DQ6ZTN6 518 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 BRINP3Q76B58 766 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 GPATCH3Q96I76 525 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 NUP188Q5SRE5 1749 aa12.1□□□□□ -0.47
LCLAT1-202ENST00000319406 ABCA3Q99758 1704 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 KDM4AO75164 1064 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 NCBP1Q09161 790 aaKnown RBP12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 NEXNQ0ZGT2 675 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 NECTIN1Q15223 517 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 RUFY3Q7L099 469 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 FEZ1Q99689 392 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 OGFRQ9NZT2 677 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 AK2P54819 239 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 G3BP1Q13283 466 aaKnown RBP eCLIP12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 TAF3Q5VWG9 929 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 KLHDC4Q8TBB5 520 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 RUFY2Q8WXA3 655 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 MED23Q9ULK4 1368 aa12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 COL5A2P05997 1499 aaPredicted RBP12.09□□□□□ -0.47
LCLAT1-202ENST00000319406 PTPN12Q05209 780 aaKnown RBP12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 TM6SF1Q9BZW5 370 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 TJP1Q07157 1748 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 PIP4K2AP48426 406 aaPredicted RBP12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 NAA30Q147X3 362 aaPredicted RBP12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 TPRNQ4KMQ1 711 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 SOS2Q07890 1332 aaPredicted RBP12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 WDR17Q8IZU2 1322 aa12.08□□□□□ -0.48
LCLAT1-202ENST00000319406 PHF14O94880 888 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 ADCK5Q3MIX3 580 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 ZSWIM6Q9HCJ5 1215 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 NBPF26B4DH59 902 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 NBPF14Q5TI25 921 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 NBPF10Q6P3W6 841 aaKnown RBP12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 NBPF15Q8N660 670 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 MAP4K1Q92918 833 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 FAM227BQ96M60 508 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 TNS2Q63HR2 1409 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 IRX5P78411 483 aaPredicted RBP12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 NKX1-1Q15270 411 aaPredicted RBP12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 IPO4Q8TEX9 1081 aaKnown RBP12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 SIL1Q9H173 461 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 LIMCH1Q9UPQ0 1083 aa12.07□□□□□ -0.48
LCLAT1-202ENST00000319406 STRCQ7RTU9 1775 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 LARGE1O95461 756 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 CABP4P57796 275 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 NMIQ13287 307 aaPredicted RBP12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 VPS53Q5VIR6 699 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 A0A0D9SFI3 127 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 HIP1O00291 1037 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 CPA1P15085 419 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 HSPA2P54652 639 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 SPC24Q8NBT2 197 aa12.06□□□□□ -0.48
LCLAT1-202ENST00000319406 CASTP20810 708 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 PRPF40BQ6NWY9 871 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 FUCA2Q9BTY2 467 aa12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 DBNLQ9UJU6 430 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 WDR33Q9C0J8 1336 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 CHAF1AQ13111 956 aaPredicted RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 COL9A3Q14050 684 aaPredicted RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 BOLA2Q9H3K6 86 aa12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
LCLAT1-202ENST00000319406 RFX7Q2KHR2 1363 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 KCNJ4P48050 445 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 GABPB1Q06547 395 aaPredicted RBP12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 TNNI3KQ59H18 835 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 CREB3L3Q68CJ9 461 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 PLCD3Q8N3E9 789 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 FPGT-TNNI3KV9GXZ4 949 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 TOGARAM1Q9Y4F4 1720 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 H7C1W4 665 aa12.04□□□□□ -0.48
LCLAT1-202ENST00000319406 ATP5JP18859 108 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms