RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 GRAPQ13588 217 aa21.04■□□□□ 0.96
LRRC42-201ENST00000319223 GRAPLQ8TC17 118 aaPredicted RBP21.04■□□□□ 0.96
LRRC42-201ENST00000319223 CELF1Q92879 486 aaKnown RBP21.04■□□□□ 0.96
LRRC42-201ENST00000319223 TTLL11Q8NHH1 800 aa21.04■□□□□ 0.96
LRRC42-201ENST00000319223 FER1L6Q2WGJ9 1857 aa21.03■□□□□ 0.96
LRRC42-201ENST00000319223 SNED1Q8TER0 1413 aa21.03■□□□□ 0.96
LRRC42-201ENST00000319223 GRM8O00222 908 aa21.03■□□□□ 0.96
LRRC42-201ENST00000319223 CTSWP56202 376 aa21.03■□□□□ 0.96
LRRC42-201ENST00000319223 CCDC93Q567U6 631 aa21.03■□□□□ 0.96
LRRC42-201ENST00000319223 NBPF7P0C2Y1 421 aaPredicted RBP21.02■□□□□ 0.96
LRRC42-201ENST00000319223 HSP90B1P14625 803 aaKnown RBP21.02■□□□□ 0.96
LRRC42-201ENST00000319223 C9orf131Q5VYM1 1079 aa21.02■□□□□ 0.96
LRRC42-201ENST00000319223 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.96
LRRC42-201ENST00000319223 PLA2G12BQ9BX93 195 aa21.02■□□□□ 0.96
LRRC42-201ENST00000319223 API5Q9BZZ5 524 aaKnown RBP21.02■□□□□ 0.96
LRRC42-201ENST00000319223 C9orf78Q9NZ63 289 aaPredicted RBP21.02■□□□□ 0.96
LRRC42-201ENST00000319223 KIF16BQ96L93 1317 aa21.02■□□□□ 0.96
LRRC42-201ENST00000319223 SBF1O95248 1867 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 BBOX1O75936 387 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 EPHA10Q5JZY3 1008 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 FOXO4P98177 505 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 CCDC152Q4G0S7 254 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 SOGA3Q5TF21 947 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 ARHGAP45Q92619 1136 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 GREM2Q9H772 168 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 ATP6V0A2Q9Y487 856 aa21.01■□□□□ 0.95
LRRC42-201ENST00000319223 TAOK3Q9H2K8 898 aa21■□□□□ 0.95
LRRC42-201ENST00000319223 RNF181Q9P0P0 153 aa21■□□□□ 0.95
LRRC42-201ENST00000319223 CSF1RP07333 972 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 TRIM27P14373 513 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 KAZALD1Q96I82 304 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 USP44Q9H0E7 712 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 UTYO14607 1347 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 LTBP3Q9NS15 1303 aa20.99■□□□□ 0.95
LRRC42-201ENST00000319223 RPS8P62241 208 aaKnown RBP20.98■□□□□ 0.95
LRRC42-201ENST00000319223 SP8Q8IXZ3 490 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 RTKN2Q8IZC4 609 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 SUCLG2Q96I99 432 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 MYH3P11055 1940 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 LMNB1P20700 586 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 FKBP4Q02790 459 aaKnown RBP eCLIP20.98■□□□□ 0.95
LRRC42-201ENST00000319223 ATF7IPQ6VMQ6 1270 aa20.98■□□□□ 0.95
LRRC42-201ENST00000319223 CCDC88AQ3V6T2 1871 aa20.97■□□□□ 0.95
LRRC42-201ENST00000319223 IPO8O15397 1037 aaKnown RBP20.97■□□□□ 0.95
LRRC42-201ENST00000319223 CCT4P50991 539 aaKnown RBP20.97■□□□□ 0.95
LRRC42-201ENST00000319223 FAM161AQ3B820 660 aa20.97■□□□□ 0.95
LRRC42-201ENST00000319223 CC2D2BQ6DHV5 1058 aa20.97■□□□□ 0.95
LRRC42-201ENST00000319223 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
LRRC42-201ENST00000319223 ZNF277Q9NRM2 450 aaPredicted RBP20.97■□□□□ 0.95
LRRC42-201ENST00000319223 LMBR1LQ6UX01 489 aa20.95■□□□□ 0.94
LRRC42-201ENST00000319223 RTL9Q8NET4 1388 aa20.95■□□□□ 0.94
LRRC42-201ENST00000319223 ZKSCAN2Q63HK3 967 aa20.95■□□□□ 0.94
LRRC42-201ENST00000319223 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
LRRC42-201ENST00000319223 PSMD1Q99460 953 aa20.95■□□□□ 0.94
LRRC42-201ENST00000319223 ITGA6P23229 1130 aa20.94■□□□□ 0.94
LRRC42-201ENST00000319223 ZNF784Q8NCA9 323 aaPredicted RBP20.94■□□□□ 0.94
LRRC42-201ENST00000319223 TMC4Q7Z404 712 aa20.93■□□□□ 0.94
LRRC42-201ENST00000319223 ANKRD18AQ8IVF6 992 aa20.93■□□□□ 0.94
LRRC42-201ENST00000319223 LRRC37AA6NMS7 1700 aa20.93■□□□□ 0.94
LRRC42-201ENST00000319223 GPSM2P81274 684 aa20.92■□□□□ 0.94
LRRC42-201ENST00000319223 MPNDQ8N594 471 aa20.92■□□□□ 0.94
LRRC42-201ENST00000319223 BICC1Q9H694 974 aaKnown RBP20.92■□□□□ 0.94
LRRC42-201ENST00000319223 RCAN3Q9UKA8 241 aa20.92■□□□□ 0.94
LRRC42-201ENST00000319223 CHMP3Q9Y3E7 222 aa20.92■□□□□ 0.94
LRRC42-201ENST00000319223 DPP8Q6V1X1 898 aaPredicted RBP20.92■□□□□ 0.94
LRRC42-201ENST00000319223 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
LRRC42-201ENST00000319223 CDC5LQ99459 802 aaKnown RBP20.92■□□□□ 0.94
LRRC42-201ENST00000319223 TMX4Q9H1E5 349 aaPredicted RBP20.92■□□□□ 0.94
LRRC42-201ENST00000319223 RLBP1P12271 317 aa20.91■□□□□ 0.94
LRRC42-201ENST00000319223 IARSP41252 1262 aaKnown RBP20.91■□□□□ 0.94
LRRC42-201ENST00000319223 GRIPAP1Q4V328 841 aa20.91■□□□□ 0.94
LRRC42-201ENST00000319223 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
LRRC42-201ENST00000319223 ZNF526Q8TF50 670 aaPredicted RBP20.91■□□□□ 0.94
LRRC42-201ENST00000319223 MEIS3Q99687 375 aa20.91■□□□□ 0.94
LRRC42-201ENST00000319223 NSFL1CQ9UNZ2 370 aaKnown RBP20.91■□□□□ 0.94
LRRC42-201ENST00000319223 COL4A5P29400 1685 aa20.91■□□□□ 0.94
LRRC42-201ENST00000319223 RTFDC1Q9BY42 306 aaPredicted RBP20.9■□□□□ 0.94
LRRC42-201ENST00000319223 DUOX1Q9NRD9 1551 aa20.9■□□□□ 0.94
LRRC42-201ENST00000319223 SPEF2Q9C093 1822 aa20.9■□□□□ 0.94
LRRC42-201ENST00000319223 ANKRD18BA2A2Z9 1011 aa20.9■□□□□ 0.94
LRRC42-201ENST00000319223 RABL6Q3YEC7 729 aaPredicted RBP20.9■□□□□ 0.94
LRRC42-201ENST00000319223 ZNF594Q96JF6 807 aaPredicted RBP20.9■□□□□ 0.94
LRRC42-201ENST00000319223 DICER1Q9UPY3 1922 aaKnown RBP20.89■□□□□ 0.94
LRRC42-201ENST00000319223 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.93
LRRC42-201ENST00000319223 BSDC1Q9NW68 430 aaPredicted RBP20.89■□□□□ 0.93
LRRC42-201ENST00000319223 POLLQ9UGP5 575 aa20.89■□□□□ 0.93
LRRC42-201ENST00000319223 MINPP1Q9UNW1 487 aa20.89■□□□□ 0.93
LRRC42-201ENST00000319223 WTIPA6NIX2 430 aaPredicted RBP20.88■□□□□ 0.93
LRRC42-201ENST00000319223 PLIN1O60240 522 aa20.88■□□□□ 0.93
LRRC42-201ENST00000319223 AOC3Q16853 763 aa20.88■□□□□ 0.93
LRRC42-201ENST00000319223 GPR101Q96P66 508 aaPredicted RBP20.88■□□□□ 0.93
LRRC42-201ENST00000319223 TIAM2Q8IVF5 1701 aa20.88■□□□□ 0.93
LRRC42-201ENST00000319223 LTBP1Q14766 1721 aa20.87■□□□□ 0.93
LRRC42-201ENST00000319223 UBTFL1P0CB47 393 aaPredicted RBP20.87■□□□□ 0.93
LRRC42-201ENST00000319223 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
LRRC42-201ENST00000319223 DZIP1LQ8IYY4 767 aaKnown RBP20.87■□□□□ 0.93
LRRC42-201ENST00000319223 CCDC57Q2TAC2 916 aa20.87■□□□□ 0.93
LRRC42-201ENST00000319223 PPIP5K2O43314 1243 aa20.86■□□□□ 0.93
LRRC42-201ENST00000319223 TBC1D16Q8TBP0 767 aa20.86■□□□□ 0.93
LRRC42-201ENST00000319223 PANK1Q8TE04 598 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms