RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FAM184AQ8NB25 1140 aa20.56■□□□□ 0.88
SCAMP4-201ENST00000316097 BCL9O00512 1426 aa20.56■□□□□ 0.88
SCAMP4-201ENST00000316097 AEBP2Q6ZN18 517 aaPredicted RBP20.56■□□□□ 0.88
SCAMP4-201ENST00000316097 PRIMPOLQ96LW4 560 aa20.56■□□□□ 0.88
SCAMP4-201ENST00000316097 ADCY5O95622 1261 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 ANAPC15P60006 121 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 MTX1Q13505 466 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 UVSSAQ2YD98 709 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 KCNQ2O43526 872 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 WDR33Q9C0J8 1336 aaKnown RBP20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 UBR2Q8IWV8 1755 aa20.55■□□□□ 0.88
SCAMP4-201ENST00000316097 CHMLP26374 656 aa20.54■□□□□ 0.88
SCAMP4-201ENST00000316097 ZNF710Q8N1W2 664 aa20.54■□□□□ 0.88
SCAMP4-201ENST00000316097 HCLS1P14317 486 aaPredicted RBP20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 HMGN5P82970 282 aaKnown RBP20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 THRAP3Q9Y2W1 955 aaKnown RBP20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 RAB11FIP3O75154 756 aa20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 FAM182BQ5T319 152 aa20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 SLIT2O94813 1529 aa20.53■□□□□ 0.88
SCAMP4-201ENST00000316097 FAM177BA6PVY3 158 aa20.52■□□□□ 0.88
SCAMP4-201ENST00000316097 CCDC183Q5T5S1 534 aa20.52■□□□□ 0.88
SCAMP4-201ENST00000316097 PAPPAQ13219 1627 aa20.52■□□□□ 0.88
SCAMP4-201ENST00000316097 ZHX1Q9UKY1 873 aaPredicted RBP20.52■□□□□ 0.88
SCAMP4-201ENST00000316097 ITGB4P16144 1822 aa20.52■□□□□ 0.87
SCAMP4-201ENST00000316097 STARD3NLO95772 234 aa20.51■□□□□ 0.87
SCAMP4-201ENST00000316097 ZBTB1Q9Y2K1 713 aa20.51■□□□□ 0.87
SCAMP4-201ENST00000316097 CNPY2Q9Y2B0 182 aa20.51■□□□□ 0.87
SCAMP4-201ENST00000316097 SASH1O94885 1247 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 CYP19A1P11511 503 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 CERKQ8TCT0 537 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 CDCA7Q9BWT1 371 aaPredicted RBP20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 NRAPQ86VF7 1730 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 PLCB2Q00722 1185 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 PTF1AQ7RTS3 328 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 CHMP3Q9Y3E7 222 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 LAMB4A4D0S4 1761 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 BCL9LQ86UU0 1499 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 GTF2F1P35269 517 aaKnown RBP eCLIP20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 CASP7P55210 303 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 KCNQ4P56696 695 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 HLFQ16534 295 aa20.5■□□□□ 0.87
SCAMP4-201ENST00000316097 JCADQ9P266 1359 aa20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 LMBR1LQ6UX01 489 aa20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 CWC25Q9NXE8 425 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 HDAC5Q9UQL6 1122 aa20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 KIF3AQ9Y496 699 aa20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 RPAP1Q9BWH6 1393 aaPredicted RBP20.49■□□□□ 0.87
SCAMP4-201ENST00000316097 HSPA1LP34931 641 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 G3BP1Q13283 466 aaKnown RBP eCLIP20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 BARGINQ6ZT62 677 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 TMEM87AQ8NBN3 555 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 STAP2Q9UGK3 403 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 TBC1D2BQ9UPU7 963 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 ARFGEF2Q9Y6D5 1785 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 GPTP24298 496 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 CBX1P83916 185 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 IL25Q9H293 177 aa20.48■□□□□ 0.87
SCAMP4-201ENST00000316097 DMTNQ08495 405 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 CCDC8Q9H0W5 538 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 USP21Q9UK80 565 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 H7C1W4 665 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 ZSCAN20P17040 1043 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 HSP90AB4PQ58FF6 505 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 PI4K2BQ8TCG2 481 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 CCDC85AQ96PX6 553 aaPredicted RBP20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 SPTLC3Q9NUV7 552 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 TCHHQ07283 1943 aa20.47■□□□□ 0.87
SCAMP4-201ENST00000316097 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 AACSQ86V21 672 aa20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 CLASRPQ8N2M8 674 aaKnown RBP20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 TLR7Q9NYK1 1049 aaKnown RBP20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 KDM4AO75164 1064 aa20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 FOXO4P98177 505 aa20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 EAF2Q96CJ1 260 aaPredicted RBP20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 FAM89AQ96GI7 184 aa20.46■□□□□ 0.87
SCAMP4-201ENST00000316097 LETM1O95202 739 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 PPP4R3BQ5MIZ7 849 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 LRP6O75581 1613 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 FIBPO43427 364 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 ZSCAN22P10073 491 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 RFX5P48382 616 aaPredicted RBP20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 UBE2HP62256 183 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 PTPN12Q05209 780 aaKnown RBP20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 TCIRG1Q13488 830 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 KIF6Q6ZMV9 814 aa20.45■□□□□ 0.86
SCAMP4-201ENST00000316097 VPS72Q15906 364 aa20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 UTP14CQ5TAP6 766 aaKnown RBP20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 IL17RAQ96F46 866 aa20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 LARP6Q9BRS8 491 aaKnown RBP20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 HSPA4P34932 840 aa20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 DOT1LQ8TEK3 1739 aa20.44■□□□□ 0.86
SCAMP4-201ENST00000316097 IFIT2P09913 472 aaKnown RBP20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 ITPK1Q13572 414 aa20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 GIMAP6Q6P9H5 292 aa20.43■□□□□ 0.86
SCAMP4-201ENST00000316097 FNBP4Q8N3X1 1017 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms