RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 ZSCAN22P10073 491 aaPredicted RBP17.84■□□□□ 0.45
CHFR-202ENST00000315585 NECTIN1Q15223 517 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 FOXD4L5Q5VV16 416 aaPredicted RBP17.84■□□□□ 0.45
CHFR-202ENST00000315585 TTLL7Q6ZT98 887 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 UBE3BQ7Z3V4 1068 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 TICAM2Q86XR7 235 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 DNAJC10Q8IXB1 793 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 FOXD4L4Q8WXT5 416 aaPredicted RBP17.84■□□□□ 0.45
CHFR-202ENST00000315585 SYTL4Q96C24 671 aaPredicted RBP17.84■□□□□ 0.45
CHFR-202ENST00000315585 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
CHFR-202ENST00000315585 HMG20BQ9P0W2 317 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
CHFR-202ENST00000315585 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.45
CHFR-202ENST00000315585 STX6O43752 255 aa17.83■□□□□ 0.45
CHFR-202ENST00000315585 PRIM1P49642 420 aaKnown RBP17.83■□□□□ 0.45
CHFR-202ENST00000315585 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.45
CHFR-202ENST00000315585 RUFY3Q7L099 469 aa17.83■□□□□ 0.45
CHFR-202ENST00000315585 MAP4K1Q92918 833 aa17.83■□□□□ 0.45
CHFR-202ENST00000315585 JAKMIP1Q96N16 626 aaKnown RBP17.83■□□□□ 0.45
CHFR-202ENST00000315585 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.44
CHFR-202ENST00000315585 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
CHFR-202ENST00000315585 TMEM63CQ9P1W3 806 aa17.83■□□□□ 0.44
CHFR-202ENST00000315585 H7C1W4 665 aa17.82■□□□□ 0.44
CHFR-202ENST00000315585 ZSCAN30Q86W11 494 aa17.82■□□□□ 0.44
CHFR-202ENST00000315585 FAM184AQ8NB25 1140 aa17.82■□□□□ 0.44
CHFR-202ENST00000315585 RFX7Q2KHR2 1363 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
CHFR-202ENST00000315585 KRT32Q14532 448 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 SYCE3A1L190 88 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 PDCP20941 246 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
CHFR-202ENST00000315585 RBSNQ9H1K0 784 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 ALDH8A1Q9H2A2 487 aaPredicted RBP17.81■□□□□ 0.44
CHFR-202ENST00000315585 ZBTB3Q9H5J0 574 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 RBM8AQ9Y5S9 174 aaKnown RBP17.81■□□□□ 0.44
CHFR-202ENST00000315585 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
CHFR-202ENST00000315585 SPATA31A6Q5VVP1 1343 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 PTH1RQ03431 593 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 HSP90AB3PQ58FF7 597 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 NGLY1Q96IV0 654 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 ATP5JP18859 108 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 SYT1P21579 422 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 CASP7P55210 303 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
CHFR-202ENST00000315585 TCIRG1Q13488 830 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 TSPY26PQ9H489 355 aa17.8■□□□□ 0.44
CHFR-202ENST00000315585 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
CHFR-202ENST00000315585 UBE2HP62256 183 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 NMIQ13287 307 aaPredicted RBP17.79■□□□□ 0.44
CHFR-202ENST00000315585 VPS72Q15906 364 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 USP48Q86UV5 1035 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 F13A1P00488 732 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 CYP19A1P11511 503 aaPredicted RBP17.79■□□□□ 0.44
CHFR-202ENST00000315585 PDLIM2Q96JY6 352 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 ISCA1Q9BUE6 129 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 SIL1Q9H173 461 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 BOLA2Q9H3K6 86 aa17.79■□□□□ 0.44
CHFR-202ENST00000315585 EPHA10Q5JZY3 1008 aa17.78■□□□□ 0.44
CHFR-202ENST00000315585 BLOC1S2Q6QNY1 142 aa17.78■□□□□ 0.44
CHFR-202ENST00000315585 ZNF330Q9Y3S2 320 aaPredicted RBP17.78■□□□□ 0.44
CHFR-202ENST00000315585 RPAP1Q9BWH6 1393 aaPredicted RBP17.78■□□□□ 0.44
CHFR-202ENST00000315585 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
CHFR-202ENST00000315585 MCM5P33992 734 aa17.77■□□□□ 0.44
CHFR-202ENST00000315585 CCDC183Q5T5S1 534 aa17.77■□□□□ 0.44
CHFR-202ENST00000315585 MARCH10Q8NA82 808 aaPredicted RBP17.77■□□□□ 0.44
CHFR-202ENST00000315585 SMARCC1Q92922 1105 aaPredicted RBP17.77■□□□□ 0.44
CHFR-202ENST00000315585 C8orf37Q96NL8 207 aa17.77■□□□□ 0.44
CHFR-202ENST00000315585 UVSSAQ2YD98 709 aa17.77■□□□□ 0.43
CHFR-202ENST00000315585 SLC27A2O14975 620 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 GJB2P29033 226 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
CHFR-202ENST00000315585 TNNI3KQ59H18 835 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 FPGT-TNNI3KV9GXZ4 949 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 RFX5P48382 616 aaPredicted RBP17.76■□□□□ 0.43
CHFR-202ENST00000315585 GIGYF2Q6Y7W6 1299 aaKnown RBP17.76■□□□□ 0.43
CHFR-202ENST00000315585 CCDC83Q8IWF9 413 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
CHFR-202ENST00000315585 FAM227BQ96M60 508 aa17.76■□□□□ 0.43
CHFR-202ENST00000315585 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
CHFR-202ENST00000315585 PTPN12Q05209 780 aaKnown RBP17.75■□□□□ 0.43
CHFR-202ENST00000315585 ADCK5Q3MIX3 580 aa17.75■□□□□ 0.43
CHFR-202ENST00000315585 LMBR1LQ6UX01 489 aa17.75■□□□□ 0.43
CHFR-202ENST00000315585 KAT6BQ8WYB5 2073 aa17.75■□□□□ 0.43
CHFR-202ENST00000315585 FOXO4P98177 505 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 JARID2Q92833 1246 aaPredicted RBP17.74■□□□□ 0.43
CHFR-202ENST00000315585 CCDC39Q9UFE4 941 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 A0A0G2JS52 829 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 ERVV-1B6SEH8 477 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
CHFR-202ENST00000315585 CHMP3Q9Y3E7 222 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 TJP1Q07157 1748 aa17.74■□□□□ 0.43
CHFR-202ENST00000315585 PCCAP05165 728 aaPredicted RBP17.73■□□□□ 0.43
CHFR-202ENST00000315585 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
CHFR-202ENST00000315585 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
CHFR-202ENST00000315585 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CHFR-202ENST00000315585 GPR108Q9NPR9 543 aa17.73■□□□□ 0.43
CHFR-202ENST00000315585 NOL7Q9UMY1 257 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms