RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 PRR5LQ6MZQ0 368 aa20.01■□□□□ 0.79
TUBB3-201ENST00000315491 CCDC85AQ96PX6 553 aaPredicted RBP20.01■□□□□ 0.79
TUBB3-201ENST00000315491 PDGFDQ9GZP0 370 aaPredicted RBP20.01■□□□□ 0.79
TUBB3-201ENST00000315491 EXOC6BQ9Y2D4 811 aa20.01■□□□□ 0.79
TUBB3-201ENST00000315491 MMP10P09238 476 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 FAM161AQ3B820 660 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 CCDC24Q8N4L8 307 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 PA2G4Q9UQ80 394 aaKnown RBP20■□□□□ 0.79
TUBB3-201ENST00000315491 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
TUBB3-201ENST00000315491 CCDC57Q2TAC2 916 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 SLC16A10Q8TF71 515 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 GREM2Q9H772 168 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 COPRSQ9NQ92 184 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
TUBB3-201ENST00000315491 ST5P78524 1137 aa19.99■□□□□ 0.79
TUBB3-201ENST00000315491 PTPN12Q05209 780 aaKnown RBP19.99■□□□□ 0.79
TUBB3-201ENST00000315491 CCDC152Q4G0S7 254 aa19.99■□□□□ 0.79
TUBB3-201ENST00000315491 KLHDC4Q8TBB5 520 aa19.99■□□□□ 0.79
TUBB3-201ENST00000315491 PARP3Q9Y6F1 533 aa19.99■□□□□ 0.79
TUBB3-201ENST00000315491 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
TUBB3-201ENST00000315491 SF3B3Q15393 1217 aaKnown RBP19.98■□□□□ 0.79
TUBB3-201ENST00000315491 HSP90AB4PQ58FF6 505 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 ANKRD45Q5TZF3 282 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 C3orf67Q6ZVT6 689 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 MYH3P11055 1940 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 RAB11FIP3O75154 756 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 ITGA6P23229 1130 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 NUCB1Q02818 461 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 RIC1Q4ADV7 1423 aa19.98■□□□□ 0.79
TUBB3-201ENST00000315491 ANKRD18BA2A2Z9 1011 aa19.97■□□□□ 0.79
TUBB3-201ENST00000315491 APBB1O00213 710 aa19.97■□□□□ 0.79
TUBB3-201ENST00000315491 R3HDM1Q15032 1099 aaKnown RBP19.97■□□□□ 0.79
TUBB3-201ENST00000315491 RTL9Q8NET4 1388 aa19.97■□□□□ 0.79
TUBB3-201ENST00000315491 G3BP1Q13283 466 aaKnown RBP eCLIP19.96■□□□□ 0.794e-6■■□□□ 14.2
TUBB3-201ENST00000315491 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
TUBB3-201ENST00000315491 SIL1Q9H173 461 aa19.96■□□□□ 0.79
TUBB3-201ENST00000315491 TAF7LQ5H9L4 462 aa19.95■□□□□ 0.78
TUBB3-201ENST00000315491 CHD1LQ86WJ1 897 aa19.95■□□□□ 0.78
TUBB3-201ENST00000315491 ZNF594Q96JF6 807 aaPredicted RBP19.95■□□□□ 0.78
TUBB3-201ENST00000315491 ZBTB47Q9UFB7 747 aaPredicted RBP19.95■□□□□ 0.78
TUBB3-201ENST00000315491 NRXN2Q9P2S2 1712 aa19.95■□□□□ 0.78
TUBB3-201ENST00000315491 ERC1Q8IUD2 1116 aa19.95■□□□□ 0.78
TUBB3-201ENST00000315491 LRRCC1Q9C099 1032 aa19.95■□□□□ 0.78
TUBB3-201ENST00000315491 TNRC6CQ9HCJ0 1690 aaKnown RBP19.94■□□□□ 0.78
TUBB3-201ENST00000315491 LNPKQ9C0E8 428 aa19.94■□□□□ 0.78
TUBB3-201ENST00000315491 SKAP1Q86WV1 359 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 RHPN1Q8TCX5 695 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 KIF1BPQ96EK5 621 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 SEC31BQ9NQW1 1179 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 CASZ1Q86V15 1759 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 EYA2O00167 538 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 SMARCA5O60264 1052 aaPredicted RBP19.93■□□□□ 0.78
TUBB3-201ENST00000315491 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
TUBB3-201ENST00000315491 CIAO1O76071 339 aa19.92■□□□□ 0.78
TUBB3-201ENST00000315491 BRIP1Q9BX63 1249 aa19.92■□□□□ 0.78
TUBB3-201ENST00000315491 SASH1O94885 1247 aa19.91■□□□□ 0.78
TUBB3-201ENST00000315491 CDC5LQ99459 802 aaKnown RBP19.91■□□□□ 0.78
TUBB3-201ENST00000315491 PSDA5PKW4 1024 aaPredicted RBP19.9■□□□□ 0.78
TUBB3-201ENST00000315491 ZBTB7AO95365 584 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 PRKCSHP14314 528 aaPredicted RBP19.9■□□□□ 0.78
TUBB3-201ENST00000315491 IL15P40933 162 aaPredicted RBP19.9■□□□□ 0.78
TUBB3-201ENST00000315491 LRRC24Q50LG9 513 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 ATG9AQ7Z3C6 839 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 PUS3Q9BZE2 481 aaKnown RBP19.9■□□□□ 0.78
TUBB3-201ENST00000315491 MTFR1LQ9H019 292 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 PDE4AP27815 886 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 IGHMBP2P38935 993 aaKnown RBP19.9■□□□□ 0.78
TUBB3-201ENST00000315491 CRY2Q49AN0 593 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 IL1RAPL2Q9NP60 686 aa19.9■□□□□ 0.78
TUBB3-201ENST00000315491 KLRG2A4D1S0 409 aaPredicted RBP19.89■□□□□ 0.77
TUBB3-201ENST00000315491 RGS3P49796 1198 aa19.89■□□□□ 0.77
TUBB3-201ENST00000315491 DDX46Q7L014 1031 aaKnown RBP19.89■□□□□ 0.77
TUBB3-201ENST00000315491 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
TUBB3-201ENST00000315491 LRP5O75197 1615 aa19.89■□□□□ 0.77
TUBB3-201ENST00000315491 DEKP35659 375 aaKnown RBP19.88■□□□□ 0.77
TUBB3-201ENST00000315491 ANKRD18AQ8IVF6 992 aa19.88■□□□□ 0.77
TUBB3-201ENST00000315491 RPGRQ92834 1020 aaKnown RBP19.88■□□□□ 0.77
TUBB3-201ENST00000315491 MPHOSPH8Q99549 860 aa19.88■□□□□ 0.77
TUBB3-201ENST00000315491 PDE6BP35913 854 aa19.88■□□□□ 0.77
TUBB3-201ENST00000315491 RIPOR2Q9Y4F9 1068 aa19.88■□□□□ 0.77
TUBB3-201ENST00000315491 TFCP2Q12800 502 aa19.87■□□□□ 0.77
TUBB3-201ENST00000315491 C16orf71Q8IYS4 520 aaPredicted RBP19.87■□□□□ 0.77
TUBB3-201ENST00000315491 CLASRPQ8N2M8 674 aaKnown RBP19.87■□□□□ 0.77
TUBB3-201ENST00000315491 CELF1Q92879 486 aaKnown RBP19.87■□□□□ 0.77
TUBB3-201ENST00000315491 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
TUBB3-201ENST00000315491 RBM17Q96I25 401 aaKnown RBP19.86■□□□□ 0.77
TUBB3-201ENST00000315491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.86■□□□□ 0.77
TUBB3-201ENST00000315491 ANKRD31Q8N7Z5 1873 aa19.86■□□□□ 0.77
TUBB3-201ENST00000315491 POLD1P28340 1107 aa19.85■□□□□ 0.77
TUBB3-201ENST00000315491 GRAPQ13588 217 aa19.85■□□□□ 0.77
TUBB3-201ENST00000315491 GRAPLQ8TC17 118 aaPredicted RBP19.85■□□□□ 0.77
TUBB3-201ENST00000315491 CEP126Q9P2H0 1117 aa19.85■□□□□ 0.77
TUBB3-201ENST00000315491 COL4A1P02462 1669 aa19.85■□□□□ 0.77
TUBB3-201ENST00000315491 HOXA10P31260 410 aaPredicted RBP19.85■□□□□ 0.77
TUBB3-201ENST00000315491 RPS8P62241 208 aaKnown RBP19.85■□□□□ 0.77
TUBB3-201ENST00000315491 METTL24Q5JXM2 366 aa19.85■□□□□ 0.77
TUBB3-201ENST00000315491 OTUD7AQ8TE49 926 aaPredicted RBP19.84■□□□□ 0.77
TUBB3-201ENST00000315491 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms