RNA–Protein interactions for RNA: ENST00000314567.7

CDPF1-201, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDPF1, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-201ENST00000314567 MSL1Q68DK7 614 aa30.67■■■□□ 2.5
CDPF1-201ENST00000314567 ILDR2Q71H61 639 aa30.67■■■□□ 2.5
CDPF1-201ENST00000314567 DDX60Q8IY21 1712 aaKnown RBP30.67■■■□□ 2.5
CDPF1-201ENST00000314567 NOP58Q9Y2X3 529 aaKnown RBP30.67■■■□□ 2.5
CDPF1-201ENST00000314567 HSP90AB4PQ58FF6 505 aa30.66■■■□□ 2.5
CDPF1-201ENST00000314567 NBPF5PQ86XG9 351 aaPredicted RBP30.66■■■□□ 2.5
CDPF1-201ENST00000314567 OSBPL3Q9H4L5 887 aa30.66■■■□□ 2.5
CDPF1-201ENST00000314567 C16orf71Q8IYS4 520 aaPredicted RBP30.65■■■□□ 2.5
CDPF1-201ENST00000314567 MYH3P11055 1940 aa30.65■■■□□ 2.5
CDPF1-201ENST00000314567 FLAD1Q8NFF5 587 aa30.65■■■□□ 2.5
CDPF1-201ENST00000314567 PLA2G12BQ9BX93 195 aa30.65■■■□□ 2.5
CDPF1-201ENST00000314567 ABCC12Q96J65 1359 aa30.64■■■□□ 2.5
CDPF1-201ENST00000314567 EIF5BO60841 1220 aaKnown RBP30.64■■■□□ 2.5
CDPF1-201ENST00000314567 DDR1Q08345 913 aa30.63■■■□□ 2.49
CDPF1-201ENST00000314567 TBC1D32Q96NH3 1257 aa30.63■■■□□ 2.49
CDPF1-201ENST00000314567 SURF6O75683 361 aaKnown RBP30.63■■■□□ 2.49
CDPF1-201ENST00000314567 GSPT1P15170 499 aaKnown RBP30.63■■■□□ 2.49
CDPF1-201ENST00000314567 TM4SF1P30408 202 aa30.63■■■□□ 2.49
CDPF1-201ENST00000314567 RFX5P48382 616 aaPredicted RBP30.63■■■□□ 2.49
CDPF1-201ENST00000314567 CARMIL3Q8ND23 1372 aa30.63■■■□□ 2.49
CDPF1-201ENST00000314567 PDE8AO60658 829 aa30.62■■■□□ 2.49
CDPF1-201ENST00000314567 GTF2E1P29083 439 aaPredicted RBP30.62■■■□□ 2.49
CDPF1-201ENST00000314567 CTSWP56202 376 aa30.62■■■□□ 2.49
CDPF1-201ENST00000314567 C3orf67Q6ZVT6 689 aa30.62■■■□□ 2.49
CDPF1-201ENST00000314567 SIL1Q9H173 461 aa30.62■■■□□ 2.49
CDPF1-201ENST00000314567 SALL3Q9BXA9 1300 aa30.62■■■□□ 2.49
CDPF1-201ENST00000314567 ERICH6Q7L0X2 663 aa30.61■■■□□ 2.49
CDPF1-201ENST00000314567 TTLL11Q8NHH1 800 aa30.61■■■□□ 2.49
CDPF1-201ENST00000314567 OTUD7AQ8TE49 926 aaPredicted RBP30.61■■■□□ 2.49
CDPF1-201ENST00000314567 QSER1Q2KHR3 1735 aa30.61■■■□□ 2.49
CDPF1-201ENST00000314567 CDC45O75419 566 aa30.61■■■□□ 2.49
CDPF1-201ENST00000314567 CSF1RP07333 972 aa30.6■■■□□ 2.49
CDPF1-201ENST00000314567 ZNF594Q96JF6 807 aaPredicted RBP30.6■■■□□ 2.49
CDPF1-201ENST00000314567 GREM2Q9H772 168 aa30.6■■■□□ 2.49
CDPF1-201ENST00000314567 LAMB2P55268 1798 aa30.6■■■□□ 2.49
CDPF1-201ENST00000314567 CASZ1Q86V15 1759 aa30.6■■■□□ 2.49
CDPF1-201ENST00000314567 KIF1BPQ96EK5 621 aa30.59■■■□□ 2.49
CDPF1-201ENST00000314567 PDE1AP54750 535 aa30.59■■■□□ 2.49
CDPF1-201ENST00000314567 TPTE2Q6XPS3 522 aa30.59■■■□□ 2.49
CDPF1-201ENST00000314567 NYXQ9GZU5 481 aa30.59■■■□□ 2.49
CDPF1-201ENST00000314567 POLRMTO00411 1230 aaKnown RBP30.58■■■□□ 2.49
CDPF1-201ENST00000314567 NPHP1O15259 732 aa30.58■■■□□ 2.49
CDPF1-201ENST00000314567 SERPINB2P05120 415 aa30.58■■■□□ 2.49
CDPF1-201ENST00000314567 PTPN12Q05209 780 aaKnown RBP30.58■■■□□ 2.49
CDPF1-201ENST00000314567 AOX1Q06278 1338 aa30.57■■■□□ 2.48
CDPF1-201ENST00000314567 MFAP1P55081 439 aaKnown RBP30.57■■■□□ 2.48
CDPF1-201ENST00000314567 NLGN1Q8N2Q7 840 aa30.57■■■□□ 2.48
CDPF1-201ENST00000314567 PRR5LQ6MZQ0 368 aa30.56■■■□□ 2.48
CDPF1-201ENST00000314567 CNBD1Q8NA66 436 aa30.56■■■□□ 2.48
CDPF1-201ENST00000314567 RHPN1Q8TCX5 695 aa30.56■■■□□ 2.48
CDPF1-201ENST00000314567 MX1P20591 662 aa30.55■■■□□ 2.48
CDPF1-201ENST00000314567 TBC1D9Q6ZT07 1266 aa30.55■■■□□ 2.48
CDPF1-201ENST00000314567 STAP2Q9UGK3 403 aa30.55■■■□□ 2.48
CDPF1-201ENST00000314567 TNRC6CQ9HCJ0 1690 aaKnown RBP30.55■■■□□ 2.48
CDPF1-201ENST00000314567 MMP10P09238 476 aa30.55■■■□□ 2.48
CDPF1-201ENST00000314567 ERC1Q8IUD2 1116 aa30.55■■■□□ 2.48
CDPF1-201ENST00000314567 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.55■■■□□ 2.48
CDPF1-201ENST00000314567 ITGA6P23229 1130 aa30.54■■■□□ 2.48
CDPF1-201ENST00000314567 OS9Q13438 667 aaPredicted RBP30.54■■■□□ 2.48
CDPF1-201ENST00000314567 CCDC57Q2TAC2 916 aa30.54■■■□□ 2.48
CDPF1-201ENST00000314567 C22orf23Q9BZE7 217 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 COPRSQ9NQ92 184 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 SEC31BQ9NQW1 1179 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 COL4A1P02462 1669 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 TAF1P21675 1872 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 SLC10A5Q5PT55 438 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 IL1RAPL2Q9NP60 686 aa30.53■■■□□ 2.48
CDPF1-201ENST00000314567 IFIT5Q13325 482 aaKnown RBP30.52■■■□□ 2.48
CDPF1-201ENST00000314567 PUS3Q9BZE2 481 aaKnown RBP30.52■■■□□ 2.48
CDPF1-201ENST00000314567 SDSP20132 328 aa30.5■■■□□ 2.47
CDPF1-201ENST00000314567 LRRC24Q50LG9 513 aa30.5■■■□□ 2.47
CDPF1-201ENST00000314567 SASH1O94885 1247 aa30.49■■■□□ 2.47
CDPF1-201ENST00000314567 G3BP1Q13283 466 aaKnown RBP eCLIP30.49■■■□□ 2.47
CDPF1-201ENST00000314567 CASC1Q6TDU7 716 aa30.49■■■□□ 2.47
CDPF1-201ENST00000314567 ANKRD18BA2A2Z9 1011 aa30.48■■■□□ 2.47
CDPF1-201ENST00000314567 R3HDM1Q15032 1099 aaKnown RBP30.48■■■□□ 2.47
CDPF1-201ENST00000314567 CCDC152Q4G0S7 254 aa30.48■■■□□ 2.47
CDPF1-201ENST00000314567 DAXXQ9UER7 740 aaPredicted RBP30.48■■■□□ 2.47
CDPF1-201ENST00000314567 SPEF2Q9C093 1822 aa30.47■■■□□ 2.47
CDPF1-201ENST00000314567 TAF7LQ5H9L4 462 aa30.47■■■□□ 2.47
CDPF1-201ENST00000314567 NLRP3Q96P20 1036 aa30.47■■■□□ 2.47
CDPF1-201ENST00000314567 RBM25P49756 843 aaKnown RBP30.46■■■□□ 2.47
CDPF1-201ENST00000314567 ATG9AQ7Z3C6 839 aa30.46■■■□□ 2.47
CDPF1-201ENST00000314567 HSP90B1P14625 803 aaKnown RBP30.46■■■□□ 2.47
CDPF1-201ENST00000314567 SF3B3Q15393 1217 aaKnown RBP30.46■■■□□ 2.47
CDPF1-201ENST00000314567 PARP3Q9Y6F1 533 aa30.46■■■□□ 2.47
CDPF1-201ENST00000314567 ST5P78524 1137 aa30.45■■■□□ 2.47
CDPF1-201ENST00000314567 NRXN2Q9P2S2 1712 aa30.45■■■□□ 2.46
CDPF1-201ENST00000314567 PSDA5PKW4 1024 aaPredicted RBP30.44■■■□□ 2.46
CDPF1-201ENST00000314567 CLASRPQ8N2M8 674 aaKnown RBP30.44■■■□□ 2.46
CDPF1-201ENST00000314567 ANKRD31Q8N7Z5 1873 aa30.43■■■□□ 2.46
CDPF1-201ENST00000314567 EYA2O00167 538 aa30.43■■■□□ 2.46
CDPF1-201ENST00000314567 TFCP2Q12800 502 aa30.43■■■□□ 2.46
CDPF1-201ENST00000314567 BECN1Q14457 450 aa30.43■■■□□ 2.46
CDPF1-201ENST00000314567 ZBTB7AO95365 584 aa30.42■■■□□ 2.46
CDPF1-201ENST00000314567 LDHAL6AQ6ZMR3 332 aa30.41■■■□□ 2.46
CDPF1-201ENST00000314567 TTC41PQ6P2S7 1318 aa30.41■■■□□ 2.46
CDPF1-201ENST00000314567 RTL9Q8NET4 1388 aa30.4■■■□□ 2.46
CDPF1-201ENST00000314567 TSHZ3Q63HK5 1081 aa30.4■■■□□ 2.46
CDPF1-201ENST00000314567 CELF1Q92879 486 aaKnown RBP30.4■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms