RNA–Protein interactions for RNA: ENST00000313433.11

RPA2-201, Transcript of replication protein A2, humanhuman

TSL 1 (best) BASIC

Gene RPA2, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA2-201ENST00000313433 GRAPQ13588 217 aa23.5■■□□□ 1.35
RPA2-201ENST00000313433 CWF19L2Q2TBE0 894 aaKnown RBP23.5■■□□□ 1.35
RPA2-201ENST00000313433 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
RPA2-201ENST00000313433 ZNF541Q9H0D2 1346 aa23.5■■□□□ 1.35
RPA2-201ENST00000313433 SPEF2Q9C093 1822 aa23.49■■□□□ 1.35
RPA2-201ENST00000313433 CC2D2BQ6DHV5 1058 aa23.49■■□□□ 1.35
RPA2-201ENST00000313433 CELF1Q92879 486 aaKnown RBP23.49■■□□□ 1.35
RPA2-201ENST00000313433 NEURL1BA8MQ27 555 aa23.48■■□□□ 1.35
RPA2-201ENST00000313433 DDX46Q7L014 1031 aaKnown RBP23.48■■□□□ 1.35
RPA2-201ENST00000313433 DDNO94850 711 aaPredicted RBP23.47■■□□□ 1.35
RPA2-201ENST00000313433 CDHR2Q9BYE9 1310 aa23.47■■□□□ 1.35
RPA2-201ENST00000313433 CEP350Q5VT06 3117 aa23.47■■□□□ 1.35
RPA2-201ENST00000313433 E9PSI1 815 aa23.46■■□□□ 1.35
RPA2-201ENST00000313433 BBOX1O75936 387 aa23.46■■□□□ 1.35
RPA2-201ENST00000313433 TOMM70O94826 608 aa23.46■■□□□ 1.35
RPA2-201ENST00000313433 FKBP5Q13451 457 aaPredicted RBP23.46■■□□□ 1.35
RPA2-201ENST00000313433 SP8Q8IXZ3 490 aa23.46■■□□□ 1.35
RPA2-201ENST00000313433 SCN4AP35499 1836 aa23.45■■□□□ 1.34
RPA2-201ENST00000313433 FZD9O00144 591 aa23.45■■□□□ 1.34
RPA2-201ENST00000313433 RTFDC1Q9BY42 306 aaPredicted RBP23.45■■□□□ 1.34
RPA2-201ENST00000313433 SEC31BQ9NQW1 1179 aa23.45■■□□□ 1.34
RPA2-201ENST00000313433 F6X3S4 739 aa23.44■■□□□ 1.34
RPA2-201ENST00000313433 CASP7P55210 303 aa23.44■■□□□ 1.34
RPA2-201ENST00000313433 DNAAF4Q8WXU2 420 aa23.44■■□□□ 1.34
RPA2-201ENST00000313433 PDE8AO60658 829 aa23.43■■□□□ 1.34
RPA2-201ENST00000313433 GRIPAP1Q4V328 841 aa23.43■■□□□ 1.34
RPA2-201ENST00000313433 RBM46Q8TBY0 533 aaKnown RBP23.43■■□□□ 1.34
RPA2-201ENST00000313433 ADAMTSL1Q8N6G6 1762 aa23.42■■□□□ 1.34
RPA2-201ENST00000313433 H7C1W4 665 aa23.42■■□□□ 1.34
RPA2-201ENST00000313433 GCKRQ14397 625 aa23.42■■□□□ 1.34
RPA2-201ENST00000313433 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
RPA2-201ENST00000313433 NEXNQ0ZGT2 675 aa23.41■■□□□ 1.34
RPA2-201ENST00000313433 AOC3Q16853 763 aa23.41■■□□□ 1.34
RPA2-201ENST00000313433 DPY19L2Q6NUT2 758 aa23.41■■□□□ 1.34
RPA2-201ENST00000313433 L3MBTL3Q96JM7 780 aaPredicted RBP23.41■■□□□ 1.34
RPA2-201ENST00000313433 CCDC85AQ96PX6 553 aaPredicted RBP23.41■■□□□ 1.34
RPA2-201ENST00000313433 HSPA6P17066 643 aa23.4■■□□□ 1.34
RPA2-201ENST00000313433 HNRNPUQ00839 825 aaKnown RBP eCLIP23.4■■□□□ 1.34
RPA2-201ENST00000313433 CTSWP56202 376 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 BEND3Q5T5X7 828 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
RPA2-201ENST00000313433 UBE3BQ7Z3V4 1068 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 TMC4Q7Z404 712 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 MPNDQ8N594 471 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 LINS1Q8NG48 757 aa23.39■■□□□ 1.33
RPA2-201ENST00000313433 A0A1B0GUL6 1792 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 PPIP5K2O43314 1243 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 POTEIP0CG38 1075 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 POTEJP0CG39 1038 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 GPSM2P81274 684 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 LARGE2Q8N3Y3 721 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
RPA2-201ENST00000313433 TTLL11Q8NHH1 800 aa23.38■■□□□ 1.33
RPA2-201ENST00000313433 RPS8P62241 208 aaKnown RBP23.37■■□□□ 1.33
RPA2-201ENST00000313433 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
RPA2-201ENST00000313433 C16orf71Q8IYS4 520 aaPredicted RBP23.37■■□□□ 1.33
RPA2-201ENST00000313433 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
RPA2-201ENST00000313433 RTL9Q8NET4 1388 aa23.37■■□□□ 1.33
RPA2-201ENST00000313433 KIAA2012Q0VF49 1180 aa23.36■■□□□ 1.33
RPA2-201ENST00000313433 PLA2G12BQ9BX93 195 aa23.36■■□□□ 1.33
RPA2-201ENST00000313433 GREM2Q9H772 168 aa23.36■■□□□ 1.33
RPA2-201ENST00000313433 POLLQ9UGP5 575 aa23.36■■□□□ 1.33
RPA2-201ENST00000313433 SCN9AQ15858 1988 aa23.35■■□□□ 1.33
RPA2-201ENST00000313433 JDP2Q8WYK2 163 aa23.35■■□□□ 1.33
RPA2-201ENST00000313433 GPR101Q96P66 508 aaPredicted RBP23.35■■□□□ 1.33
RPA2-201ENST00000313433 HSP90B1P14625 803 aaKnown RBP23.34■■□□□ 1.33
RPA2-201ENST00000313433 FSTL1Q12841 308 aa23.34■■□□□ 1.33
RPA2-201ENST00000313433 SUPT20HQ8NEM7 779 aa23.34■■□□□ 1.33
RPA2-201ENST00000313433 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
RPA2-201ENST00000313433 VPS33BQ9H267 617 aa23.34■■□□□ 1.33
RPA2-201ENST00000313433 ZNF646O15015 1829 aaPredicted RBP23.33■■□□□ 1.33
RPA2-201ENST00000313433 YDJCA8MPS7 323 aa23.33■■□□□ 1.33
RPA2-201ENST00000313433 NIM1KQ8IY84 436 aa23.33■■□□□ 1.33
RPA2-201ENST00000313433 GPC2Q8N158 579 aa23.33■■□□□ 1.33
RPA2-201ENST00000313433 TAF1DQ9H5J8 278 aaPredicted RBP23.33■■□□□ 1.33
RPA2-201ENST00000313433 TMX4Q9H1E5 349 aaPredicted RBP23.32■■□□□ 1.32
RPA2-201ENST00000313433 NSFL1CQ9UNZ2 370 aaKnown RBP23.32■■□□□ 1.32
RPA2-201ENST00000313433 PSME4Q14997 1843 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 WTIPA6NIX2 430 aaPredicted RBP23.31■■□□□ 1.32
RPA2-201ENST00000313433 CSF1RP07333 972 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 SCNN1DP51172 638 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 SMC1BQ8NDV3 1235 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 TBC1D16Q8TBP0 767 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 PODXL2Q9NZ53 605 aa23.31■■□□□ 1.32
RPA2-201ENST00000313433 EIF6P56537 245 aaKnown RBP23.3■■□□□ 1.32
RPA2-201ENST00000313433 FOXO4P98177 505 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 CXCL9Q07325 125 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 ZNRF3Q9ULT6 936 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 GJA3Q9Y6H8 435 aa23.3■■□□□ 1.32
RPA2-201ENST00000313433 ANKRD18AQ8IVF6 992 aa23.29■■□□□ 1.32
RPA2-201ENST00000313433 IQCA1LA6NCM1 817 aa23.28■■□□□ 1.32
RPA2-201ENST00000313433 HTRA3P83110 453 aa23.28■■□□□ 1.32
RPA2-201ENST00000313433 HACL1Q9UJ83 578 aa23.28■■□□□ 1.32
RPA2-201ENST00000313433 ZBED9Q6R2W3 1325 aa23.28■■□□□ 1.32
RPA2-201ENST00000313433 RIMBP2O15034 1052 aa23.27■■□□□ 1.32
RPA2-201ENST00000313433 EPHX2P34913 555 aa23.27■■□□□ 1.32
RPA2-201ENST00000313433 WASHC4Q2M389 1173 aa23.27■■□□□ 1.32
RPA2-201ENST00000313433 SLC4A10Q6U841 1118 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms