RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 DDX46Q7L014 1031 aaKnown RBP21.76■■□□□ 1.07
PUF60-201ENST00000313352 ZNF784Q8NCA9 323 aaPredicted RBP21.76■■□□□ 1.07
PUF60-201ENST00000313352 RNF181Q9P0P0 153 aa21.76■■□□□ 1.07
PUF60-201ENST00000313352 PTPRCP08575 1304 aa21.76■■□□□ 1.07
PUF60-201ENST00000313352 GRAPQ13588 217 aa21.75■■□□□ 1.07
PUF60-201ENST00000313352 CCDC93Q567U6 631 aa21.75■■□□□ 1.07
PUF60-201ENST00000313352 GRAPLQ8TC17 118 aaPredicted RBP21.75■■□□□ 1.07
PUF60-201ENST00000313352 ZNF526Q8TF50 670 aaPredicted RBP21.74■■□□□ 1.07
PUF60-201ENST00000313352 SRCIN1Q9C0H9 1055 aa21.74■■□□□ 1.07
PUF60-201ENST00000313352 CTSWP56202 376 aa21.73■■□□□ 1.07
PUF60-201ENST00000313352 TTLL11Q8NHH1 800 aa21.73■■□□□ 1.07
PUF60-201ENST00000313352 BRPF1P55201 1214 aaPredicted RBP21.73■■□□□ 1.07
PUF60-201ENST00000313352 EPHA10Q5JZY3 1008 aa21.73■■□□□ 1.07
PUF60-201ENST00000313352 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
PUF60-201ENST00000313352 GREM2Q9H772 168 aa21.73■■□□□ 1.07
PUF60-201ENST00000313352 ZNF277Q9NRM2 450 aaPredicted RBP21.73■■□□□ 1.07
PUF60-201ENST00000313352 NBPF7P0C2Y1 421 aaPredicted RBP21.72■■□□□ 1.07
PUF60-201ENST00000313352 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
PUF60-201ENST00000313352 ATP6V0A2Q9Y487 856 aa21.72■■□□□ 1.07
PUF60-201ENST00000313352 GRM8O00222 908 aa21.71■■□□□ 1.07
PUF60-201ENST00000313352 LMNB1P20700 586 aa21.71■■□□□ 1.07
PUF60-201ENST00000313352 MYH3P11055 1940 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 ALDH1L1O75891 902 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 BBOX1O75936 387 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 FOXO4P98177 505 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 CCDC152Q4G0S7 254 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 FRAT1Q92837 279 aaPredicted RBP21.7■■□□□ 1.06
PUF60-201ENST00000313352 KAZALD1Q96I82 304 aa21.7■■□□□ 1.06
PUF60-201ENST00000313352 FKBP4Q02790 459 aaKnown RBP eCLIP21.69■■□□□ 1.064e-12■■■■□ 23.5
PUF60-201ENST00000313352 PLA2G12BQ9BX93 195 aa21.69■■□□□ 1.06
PUF60-201ENST00000313352 C9orf78Q9NZ63 289 aaPredicted RBP21.69■■□□□ 1.06
PUF60-201ENST00000313352 LTBP3Q9NS15 1303 aa21.69■■□□□ 1.06
PUF60-201ENST00000313352 RPS8P62241 208 aaKnown RBP21.69■■□□□ 1.06
PUF60-201ENST00000313352 FAM161AQ3B820 660 aa21.69■■□□□ 1.06
PUF60-201ENST00000313352 SP8Q8IXZ3 490 aa21.69■■□□□ 1.06
PUF60-201ENST00000313352 SUCLG2Q96I99 432 aa21.69■■□□□ 1.06
PUF60-201ENST00000313352 COL4A5P29400 1685 aa21.68■■□□□ 1.06
PUF60-201ENST00000313352 RTKN2Q8IZC4 609 aa21.68■■□□□ 1.06
PUF60-201ENST00000313352 TRIM27P14373 513 aa21.67■■□□□ 1.06
PUF60-201ENST00000313352 USP44Q9H0E7 712 aa21.67■■□□□ 1.06
PUF60-201ENST00000313352 CSF1RP07333 972 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 CLUAP1Q96AJ1 413 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 TIAM2Q8IVF5 1701 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 HSP90B1P14625 803 aaKnown RBP21.66■■□□□ 1.06
PUF60-201ENST00000313352 LRRC37AA6NMS7 1700 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 SPEF2Q9C093 1822 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 DUOX1Q9NRD9 1551 aa21.66■■□□□ 1.06
PUF60-201ENST00000313352 KIF16BQ96L93 1317 aa21.65■■□□□ 1.06
PUF60-201ENST00000313352 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
PUF60-201ENST00000313352 ITGA6P23229 1130 aa21.65■■□□□ 1.06
PUF60-201ENST00000313352 UTYO14607 1347 aa21.65■■□□□ 1.06
PUF60-201ENST00000313352 GPSM2P81274 684 aa21.64■■□□□ 1.06
PUF60-201ENST00000313352 CC2D2BQ6DHV5 1058 aa21.64■■□□□ 1.06
PUF60-201ENST00000313352 LMBR1LQ6UX01 489 aa21.64■■□□□ 1.06
PUF60-201ENST00000313352 GPR101Q96P66 508 aaPredicted RBP21.64■■□□□ 1.06
PUF60-201ENST00000313352 PSMD1Q99460 953 aa21.64■■□□□ 1.06
PUF60-201ENST00000313352 API5Q9BZZ5 524 aaKnown RBP21.64■■□□□ 1.06
PUF60-201ENST00000313352 DICER1Q9UPY3 1922 aaKnown RBP21.64■■□□□ 1.05
PUF60-201ENST00000313352 IARSP41252 1262 aaKnown RBP21.64■■□□□ 1.05
PUF60-201ENST00000313352 MPNDQ8N594 471 aa21.64■■□□□ 1.05
PUF60-201ENST00000313352 NSFL1CQ9UNZ2 370 aaKnown RBP21.64■■□□□ 1.05
PUF60-201ENST00000313352 CHMP3Q9Y3E7 222 aa21.64■■□□□ 1.05
PUF60-201ENST00000313352 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
PUF60-201ENST00000313352 ATF7IPQ6VMQ6 1270 aa21.63■■□□□ 1.05
PUF60-201ENST00000313352 ARHGAP45Q92619 1136 aa21.63■■□□□ 1.05
PUF60-201ENST00000313352 AOC3Q16853 763 aa21.62■■□□□ 1.05
PUF60-201ENST00000313352 ANKRD18AQ8IVF6 992 aa21.62■■□□□ 1.05
PUF60-201ENST00000313352 ZNF594Q96JF6 807 aaPredicted RBP21.62■■□□□ 1.05
PUF60-201ENST00000313352 BICC1Q9H694 974 aaKnown RBP21.62■■□□□ 1.05
PUF60-201ENST00000313352 RTL9Q8NET4 1388 aa21.62■■□□□ 1.05
PUF60-201ENST00000313352 POLLQ9UGP5 575 aa21.62■■□□□ 1.05
PUF60-201ENST00000313352 LTBP1Q14766 1721 aa21.61■■□□□ 1.05
PUF60-201ENST00000313352 NMRK2Q9NPI5 230 aa21.61■■□□□ 1.05
PUF60-201ENST00000313352 CCT4P50991 539 aaKnown RBP21.6■■□□□ 1.05
PUF60-201ENST00000313352 ANKRD44Q8N8A2 993 aa21.6■■□□□ 1.05
PUF60-201ENST00000313352 MEIS3Q99687 375 aa21.6■■□□□ 1.05
PUF60-201ENST00000313352 RTFDC1Q9BY42 306 aaPredicted RBP21.6■■□□□ 1.05
PUF60-201ENST00000313352 RLBP1P12271 317 aa21.59■■□□□ 1.05
PUF60-201ENST00000313352 CDC5LQ99459 802 aaKnown RBP21.59■■□□□ 1.05
PUF60-201ENST00000313352 TMX4Q9H1E5 349 aaPredicted RBP21.59■■□□□ 1.05
PUF60-201ENST00000313352 GPBP1L1Q9HC44 474 aaPredicted RBP21.59■■□□□ 1.05
PUF60-201ENST00000313352 ZNF541Q9H0D2 1346 aa21.59■■□□□ 1.05
PUF60-201ENST00000313352 ZKSCAN2Q63HK3 967 aa21.59■■□□□ 1.05
PUF60-201ENST00000313352 INTS3Q68E01 1043 aaKnown RBP21.59■■□□□ 1.05
PUF60-201ENST00000313352 TMC4Q7Z404 712 aa21.59■■□□□ 1.05
PUF60-201ENST00000313352 MINPP1Q9UNW1 487 aa21.59■■□□□ 1.05
PUF60-201ENST00000313352 PPIP5K2O43314 1243 aa21.58■■□□□ 1.05
PUF60-201ENST00000313352 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.05
PUF60-201ENST00000313352 TMEM57Q8N5G2 664 aa21.58■■□□□ 1.05
PUF60-201ENST00000313352 RIMBP2O15034 1052 aa21.57■■□□□ 1.04
PUF60-201ENST00000313352 IPO8O15397 1037 aaKnown RBP21.57■■□□□ 1.04
PUF60-201ENST00000313352 DDNO94850 711 aaPredicted RBP21.57■■□□□ 1.04
PUF60-201ENST00000313352 BSDC1Q9NW68 430 aaPredicted RBP21.57■■□□□ 1.04
PUF60-201ENST00000313352 ANKRD18BA2A2Z9 1011 aa21.57■■□□□ 1.04
PUF60-201ENST00000313352 TBC1D16Q8TBP0 767 aa21.57■■□□□ 1.04
PUF60-201ENST00000313352 ANKIB1Q9P2G1 1089 aa21.57■■□□□ 1.04
PUF60-201ENST00000313352 GLTPD2A6NH11 291 aa21.56■■□□□ 1.04
PUF60-201ENST00000313352 C6orf229H3BNL8 230 aa21.56■■□□□ 1.04
PUF60-201ENST00000313352 SNAP23O00161 211 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms