RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 CWF19L2Q2TBE0 894 aaKnown RBP18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 SP8Q8IXZ3 490 aa18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 JARID2Q92833 1246 aaPredicted RBP18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 MYH16Q9H6N6 1097 aa18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 CWC25Q9NXE8 425 aaPredicted RBP18.76■□□□□ 0.59
PPP1CA-201ENST00000312989 NEURL1BA8MQ27 555 aa18.75■□□□□ 0.59
PPP1CA-201ENST00000312989 HSPA6P17066 643 aa18.75■□□□□ 0.59
PPP1CA-201ENST00000312989 GRIPAP1Q4V328 841 aa18.75■□□□□ 0.59
PPP1CA-201ENST00000312989 L3MBTL3Q96JM7 780 aaPredicted RBP18.75■□□□□ 0.59
PPP1CA-201ENST00000312989 CDHR2Q9BYE9 1310 aa18.75■□□□□ 0.59
PPP1CA-201ENST00000312989 VEGFAP15692 232 aaPredicted RBP18.74■□□□□ 0.59
PPP1CA-201ENST00000312989 DDX46Q7L014 1031 aaKnown RBP18.74■□□□□ 0.59
PPP1CA-201ENST00000312989 LTBP1Q14766 1721 aa18.74■□□□□ 0.59
PPP1CA-201ENST00000312989 CASP7P55210 303 aa18.73■□□□□ 0.59
PPP1CA-201ENST00000312989 SEC31BQ9NQW1 1179 aa18.73■□□□□ 0.59
PPP1CA-201ENST00000312989 TAF1P21675 1872 aa18.73■□□□□ 0.59
PPP1CA-201ENST00000312989 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
PPP1CA-201ENST00000312989 H7C1W4 665 aa18.71■□□□□ 0.59
PPP1CA-201ENST00000312989 PDE8AO60658 829 aa18.71■□□□□ 0.59
PPP1CA-201ENST00000312989 SLFN5Q08AF3 891 aa18.71■□□□□ 0.59
PPP1CA-201ENST00000312989 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
PPP1CA-201ENST00000312989 POTEIP0CG38 1075 aa18.7■□□□□ 0.58
PPP1CA-201ENST00000312989 POTEJP0CG39 1038 aa18.7■□□□□ 0.58
PPP1CA-201ENST00000312989 DNAAF4Q8WXU2 420 aa18.7■□□□□ 0.58
PPP1CA-201ENST00000312989 CDCA7LQ96GN5 454 aa18.7■□□□□ 0.58
PPP1CA-201ENST00000312989 FSTL1Q12841 308 aa18.69■□□□□ 0.58
PPP1CA-201ENST00000312989 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
PPP1CA-201ENST00000312989 GCKRQ14397 625 aa18.69■□□□□ 0.58
PPP1CA-201ENST00000312989 AOC3Q16853 763 aa18.69■□□□□ 0.58
PPP1CA-201ENST00000312989 TMC4Q7Z404 712 aa18.69■□□□□ 0.58
PPP1CA-201ENST00000312989 F6X3S4 739 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 KIAA2012Q0VF49 1180 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 BEND3Q5T5X7 828 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 DPP8Q6V1X1 898 aaPredicted RBP18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 MPNDQ8N594 471 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 LINS1Q8NG48 757 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 VPS33BQ9H267 617 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 ADAMTSL1Q8N6G6 1762 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 RTL9Q8NET4 1388 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 E9PSI1 815 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 CTSWP56202 376 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 RPS8P62241 208 aaKnown RBP18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 GPSM2P81274 684 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
PPP1CA-201ENST00000312989 PPIP5K2O43314 1243 aa18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 NEXNQ0ZGT2 675 aa18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 GPC2Q8N158 579 aa18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 CCDC85AQ96PX6 553 aaPredicted RBP18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 POLLQ9UGP5 575 aa18.67■□□□□ 0.58
PPP1CA-201ENST00000312989 YDJCA8MPS7 323 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 SCNN1DP51172 638 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 UBE3BQ7Z3V4 1068 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 MRPL50Q8N5N7 158 aaKnown RBP18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 SMC1BQ8NDV3 1235 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 JDP2Q8WYK2 163 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 GREM2Q9H772 168 aa18.66■□□□□ 0.58
PPP1CA-201ENST00000312989 MIER1Q8N108 512 aa18.65■□□□□ 0.58
PPP1CA-201ENST00000312989 SUPT20HQ8NEM7 779 aa18.65■□□□□ 0.58
PPP1CA-201ENST00000312989 PODXL2Q9NZ53 605 aa18.65■□□□□ 0.58
PPP1CA-201ENST00000312989 CSF1RP07333 972 aa18.64■□□□□ 0.57
PPP1CA-201ENST00000312989 HSP90B1P14625 803 aaKnown RBP18.64■□□□□ 0.57
PPP1CA-201ENST00000312989 CXCL9Q07325 125 aa18.64■□□□□ 0.57
PPP1CA-201ENST00000312989 NIM1KQ8IY84 436 aa18.64■□□□□ 0.57
PPP1CA-201ENST00000312989 IQCA1LA6NCM1 817 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 HTRA3P83110 453 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 DNAJC5GQ8N7S2 189 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 TBC1D16Q8TBP0 767 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 SSH1Q8WYL5 1049 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 GPR101Q96P66 508 aaPredicted RBP18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 ZNRF3Q9ULT6 936 aa18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 NSFL1CQ9UNZ2 370 aaKnown RBP18.63■□□□□ 0.57
PPP1CA-201ENST00000312989 SCN4AP35499 1836 aa18.62■□□□□ 0.57
PPP1CA-201ENST00000312989 APLP1P51693 650 aa18.62■□□□□ 0.57
PPP1CA-201ENST00000312989 HACL1Q9UJ83 578 aa18.62■□□□□ 0.57
PPP1CA-201ENST00000312989 CACNA1FO60840 1977 aa18.62■□□□□ 0.57
PPP1CA-201ENST00000312989 WTIPA6NIX2 430 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-201ENST00000312989 EPHX2P34913 555 aa18.61■□□□□ 0.57
PPP1CA-201ENST00000312989 EIF6P56537 245 aaKnown RBP18.61■□□□□ 0.57
PPP1CA-201ENST00000312989 FOXO4P98177 505 aa18.61■□□□□ 0.57
PPP1CA-201ENST00000312989 TMX4Q9H1E5 349 aaPredicted RBP18.61■□□□□ 0.57
PPP1CA-201ENST00000312989 FAM161AQ3B820 660 aa18.6■□□□□ 0.57
PPP1CA-201ENST00000312989 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
PPP1CA-201ENST00000312989 DIEXFQ68CQ4 756 aaKnown RBP18.6■□□□□ 0.57
PPP1CA-201ENST00000312989 CHADLQ6NUI6 762 aa18.6■□□□□ 0.57
PPP1CA-201ENST00000312989 GJA3Q9Y6H8 435 aa18.6■□□□□ 0.57
PPP1CA-201ENST00000312989 EPS15P42566 896 aa18.59■□□□□ 0.57
PPP1CA-201ENST00000312989 LDHDQ86WU2 507 aa18.59■□□□□ 0.57
PPP1CA-201ENST00000312989 KAZALD1Q96I82 304 aa18.59■□□□□ 0.57
PPP1CA-201ENST00000312989 PASKQ96RG2 1323 aa18.59■□□□□ 0.57
PPP1CA-201ENST00000312989 WASHC4Q2M389 1173 aa18.58■□□□□ 0.57
PPP1CA-201ENST00000312989 ANKRD18AQ8IVF6 992 aa18.58■□□□□ 0.57
PPP1CA-201ENST00000312989 BSDC1Q9NW68 430 aaPredicted RBP18.58■□□□□ 0.57
PPP1CA-201ENST00000312989 MINPP1Q9UNW1 487 aa18.58■□□□□ 0.57
PPP1CA-201ENST00000312989 GRM8O00222 908 aa18.57■□□□□ 0.56
PPP1CA-201ENST00000312989 ALDH1L1O75891 902 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms