RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 MAML3Q96JK9 1138 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 MRPL1Q9BYD6 325 aaKnown RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 ZDHHC3Q9NYG2 299 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 UBA2Q9UBT2 640 aaPredicted RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 MYT1LQ9UL68 1186 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 LIG1P18858 919 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 ATP1A2P50993 1020 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 IGBP1P78318 339 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 CENPVQ7Z7K6 275 aaPredicted RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 CEP57L1Q8IYX8 460 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 TANGO6Q9C0B7 1094 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 DBNLQ9UJU6 430 aaKnown RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 DNAJC25-GNG10A0A024R161 153 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 ZBTB7BO15156 539 aaPredicted RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 LSSP48449 732 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 EIF4G2P78344 907 aaKnown RBP eCLIP1.61□□□□□ -2.15
CEP290-201ENST00000309041 NAALADL2Q58DX5 795 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 ISM2Q6H9L7 571 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 PDXDC1Q6P996 788 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 RPUSD2Q8IZ73 545 aaKnown RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 MIGA1Q8NAN2 632 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 WIPF2Q8TF74 440 aaPredicted RBP1.61□□□□□ -2.15
CEP290-201ENST00000309041 KCNK16Q96T55 309 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 PSMD1Q99460 953 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 ORAI3Q9BRQ5 295 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 ADAM33Q9BZ11 813 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 SNTG2Q9NY99 539 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 RABGAP1Q9Y3P9 1069 aa1.61□□□□□ -2.15
CEP290-201ENST00000309041 SBNO2Q9Y2G9 1366 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 IFT140Q96RY7 1462 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CNTLNQ9NXG0 1405 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 RNF225M0QZC1 329 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 ATG7O95352 703 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MAN2A2P49641 1150 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MKRN3Q13064 507 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 IDI1Q13907 227 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 NCAPH2Q6IBW4 605 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 USP51Q70EK9 711 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 TNMDQ9H2S6 317 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 RIMBP3CA6NJZ7 1639 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 RIMBP3BA6NNM3 1639 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 RIMBP3Q9UFD9 1639 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 TNFRSF10BO14763 440 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PPP1R12AO14974 1030 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 MARCH6O60337 910 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 SLC16A8O95907 504 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 BPIP17213 487 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 SETDB1Q15047 1291 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 KLHL17Q6TDP4 642 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 ARID3BQ8IVW6 561 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 MDFIQ99750 246 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MTMR12Q9C0I1 747 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CWC25Q9NXE8 425 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 WDR3Q9UNX4 943 aaKnown RBP eCLIP1.6□□□□□ -2.15
CEP290-201ENST00000309041 RBM19Q9Y4C8 960 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 ZMYM4Q5VZL5 1548 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MPHOSPH10O00566 681 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 ARIH2O95376 493 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 DCAF6Q58WW2 860 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PPP1R26Q5T8A7 1209 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 DDX42Q86XP3 938 aaKnown RBP eCLIP1.6□□□□□ -2.15
CEP290-201ENST00000309041 PLCB1Q9NQ66 1216 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 FAM207AQ9NSI2 230 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 CACNA2D2Q9NY47 1150 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MN1Q10571 1320 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 WASHC2AQ641Q2 1341 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CFTRP13569 1480 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PPFIA2O75334 1257 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 NUMBP49757 651 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 C3orf67Q6ZVT6 689 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 KIAA1328Q86T90 577 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 IL27Q8NEV9 243 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PKP2Q99959 881 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 OCSTAMPQ9BR26 566 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 KIF3AQ9Y496 699 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 DHX57Q6P158 1386 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 CAND2O75155 1236 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PPP1R37O75864 691 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 SCO1O75880 301 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PCSK2P16519 638 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CSTF1Q05048 431 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 BTKQ06187 659 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 VAC14Q08AM6 782 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 TBL3Q12788 808 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 PTGDRQ13258 359 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 CCDC184Q52MB2 194 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 ZNF746Q6NUN9 644 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 USP17L6PQ6QN14 398 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MIGA2Q7L4E1 593 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 AHI1Q8N157 1196 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 MICALL1Q8N3F8 863 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 PDCD7Q8N8D1 485 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 ALG1Q9BT22 464 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 OR10A4Q9H209 315 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 EMILIN3Q9NT22 766 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 BIN2Q9UBW5 565 aaPredicted RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 WASF2Q9Y6W5 498 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 TCOF1Q13428 1488 aaKnown RBP1.6□□□□□ -2.15
CEP290-201ENST00000309041 PLEKHD1A6NEE1 506 aa1.6□□□□□ -2.15
CEP290-201ENST00000309041 BACH1O14867 736 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms