RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SH2D4AQ9H788 454 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 PLA2R1Q13018 1463 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 CATIPQ7Z7H3 387 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 MAP3K19Q56UN5 1328 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 LEKR1Q6ZMV7 388 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 AATKQ6ZMQ8 1374 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 KIAA0754O94854 1291 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 SSH1Q8WYL5 1049 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 SH2B1Q9NRF2 756 aaPredicted RBP9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 H0YIN7 160 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 MX1P20591 662 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 PPM1EQ8WY54 764 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 TRIM5Q9C035 493 aa9.67□□□□□ -0.86
PCDHB1-201ENST00000306549 MROH2AA6NES4 1674 aa9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 KIF20AO95235 890 aa9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 WDR33Q9C0J8 1336 aaKnown RBP9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 SSR1P43307 286 aaKnown RBP9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 RICTORQ6R327 1708 aa9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 CEP170BQ9Y4F5 1589 aaPredicted RBP9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 MTERF4Q7Z6M4 381 aaKnown RBP9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 CBFA2T2O43439 604 aa9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
PCDHB1-201ENST00000306549 DDX21Q9NR30 783 aaKnown RBP eCLIP9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 PPLO60437 1756 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 PI4KAP2A4QPH2 592 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 ZNF213O14771 459 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 PI4KAP1Q8N8J0 262 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 ECHDC1Q9NTX5 307 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 KIF20BQ96Q89 1820 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 ABCA6Q8N139 1617 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 TAX1BP1Q86VP1 789 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 TESK2Q96S53 571 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 FERMT1Q9BQL6 677 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 SERPINC1P01008 464 aa9.65□□□□□ -0.86
PCDHB1-201ENST00000306549 ZNF790Q6PG37 636 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 TMEM57Q8N5G2 664 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 KRT23Q9C075 422 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 COMMD10Q9Y6G5 202 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 GNPATO15228 680 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 PLCD4Q9BRC7 762 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 PNMA2Q9UL42 364 aa9.65□□□□□ -0.87
PCDHB1-201ENST00000306549 ZNF397Q8NF99 534 aaPredicted RBP9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 TAF4BQ92750 862 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 ERLIN1O75477 346 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 FGFR1OPO95684 399 aaKnown RBP9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 NEK4P51957 841 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 NCAPD2Q15021 1401 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 SH3TC1Q8TE82 1336 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 KDM4AO75164 1064 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 LTKP29376 864 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 TMEM266Q2M3C6 531 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 NUP133Q8WUM0 1156 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 LRRC45Q96CN5 670 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 CDK12Q9NYV4 1490 aaPredicted RBP9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 MYCNP04198 464 aaPredicted RBP9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 NCOA3Q9Y6Q9 1424 aa9.64□□□□□ -0.87
PCDHB1-201ENST00000306549 EIF3JO75822 258 aaKnown RBP9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 ARHGEF6Q15052 776 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 WDR78Q5VTH9 848 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 SPATA31E1Q6ZUB1 1445 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 ALKQ9UM73 1620 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 GPTP24298 496 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 MBIPQ9NS73 344 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 KRT85P78386 507 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 VPS36Q86VN1 386 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 CHMP4BP1P59074 171 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 GSE1Q14687 1217 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 ATP2B3Q16720 1220 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 NLGN1Q8N2Q7 840 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 PLBD2Q8NHP8 589 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 GLT8D2Q9H1C3 349 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 SLC52A2Q9HAB3 445 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 BMP15O95972 392 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 CEP57L1Q8IYX8 460 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 WDR66Q8TBY9 1149 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 LRRC27Q9C0I9 530 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 PPRC1Q5VV67 1664 aaKnown RBP9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 CCDC66A2RUB6 948 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 TNFAIP1Q13829 316 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 DPY19L2Q6NUT2 758 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
PCDHB1-201ENST00000306549 STXBP4Q6ZWJ1 553 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 XAGE3Q8WTP9 111 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 SPATA31A6Q5VVP1 1343 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 GTPBP4Q9BZE4 634 aaKnown RBP9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 CIZ1Q9ULV3 898 aaPredicted RBP9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 BAG4O95429 457 aaKnown RBP9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 ORAI2Q96SN7 254 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 BEGAINQ9BUH8 593 aa9.62□□□□□ -0.87
PCDHB1-201ENST00000306549 USP6P35125 1406 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms