RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 ANKRD20A12PQ8NF67 263 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 PLEKHG2Q9H7P9 1386 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 MYO1BO43795 1136 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 BAG4O95429 457 aaKnown RBP7.4□□□□□ -1.22
SH3D19-201ENST00000304527 FSD1Q9BTV5 496 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 BEGAINQ9BUH8 593 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 MST1RQ04912 1400 aa7.4□□□□□ -1.22
SH3D19-201ENST00000304527 TPM3P06753 285 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 PROSER3Q2NL68 480 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 CWC27Q6UX04 472 aaKnown RBP7.4□□□□□ -1.23
SH3D19-201ENST00000304527 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.23
SH3D19-201ENST00000304527 TPM1P09493 284 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 RBM6P78332 1123 aaKnown RBP7.4□□□□□ -1.23
SH3D19-201ENST00000304527 DDB1Q16531 1140 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 CAVIN4Q5BKX8 364 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 SPATA31A3Q5VYP0 1347 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 ZCRB1Q8TBF4 217 aaKnown RBP7.4□□□□□ -1.23
SH3D19-201ENST00000304527 PXDNQ92626 1479 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 ZNF496Q96IT1 587 aaPredicted RBP7.4□□□□□ -1.23
SH3D19-201ENST00000304527 PCDH11XQ9BZA7 1347 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 PCDH11YQ9BZA8 1340 aa7.4□□□□□ -1.23
SH3D19-201ENST00000304527 KAT6BQ8WYB5 2073 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 SALL3Q9BXA9 1300 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 FOXD4L6Q3SYB3 417 aaPredicted RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 FOXD4L3Q6VB84 417 aaPredicted RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 STK11IPQ8N1F8 1099 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 DDX17Q92841 729 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 TMX3Q96JJ7 454 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 SIL1Q9H173 461 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 ERBB4Q15303 1308 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 CERS3Q8IU89 383 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 ZNF622Q969S3 477 aaKnown RBP eCLIP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 UPF3BQ9BZI7 483 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 SGSM2O43147 1006 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 PSMA5P28066 241 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 INTS4Q96HW7 963 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 RAD50Q92878 1312 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 MBD3O95983 291 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 DDIT3P35638 169 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 SUCLG2Q96I99 432 aa7.39□□□□□ -1.23
SH3D19-201ENST00000304527 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 PA2G4Q9UQ80 394 aaKnown RBP7.39□□□□□ -1.23
SH3D19-201ENST00000304527 WDR33Q9C0J8 1336 aaKnown RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 MED1Q15648 1581 aaPredicted RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 CEP126Q9P2H0 1117 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 PHRF1Q9P1Y6 1649 aaKnown RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 GCKRQ14397 625 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 KLHL40Q2TBA0 621 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 PARP3Q9Y6F1 533 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 LMO7Q8WWI1 1683 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 LMOD1P29536 600 aaPredicted RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 TMEM87AQ8NBN3 555 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 CCDC97Q96F63 343 aaPredicted RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 DNAI2Q9GZS0 605 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 SMC3Q9UQE7 1217 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 CYP46A1Q9Y6A2 500 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 NEURL1BA8MQ27 555 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 CRACR2BQ8N4Y2 399 aaPredicted RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 GPATCH11Q8N954 259 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 MPHOSPH6Q99547 160 aaKnown RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 GRPEL1Q9HAV7 217 aa7.38□□□□□ -1.23
SH3D19-201ENST00000304527 MARF1Q9Y4F3 1742 aaKnown RBP7.38□□□□□ -1.23
SH3D19-201ENST00000304527 HSPA4P34932 840 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 FAM196AQ6ZSG2 479 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 DDX46Q7L014 1031 aaKnown RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 UBE3BQ7Z3V4 1068 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PI4K2BQ8TCG2 481 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 ZSCAN31Q96LW9 406 aaPredicted RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PRAMEF22A3QJZ6 481 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PTCD1O75127 700 aaKnown RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 IL2RBP14784 551 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PLBD2Q8NHP8 589 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 CCDC8Q9H0W5 538 aaPredicted RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 ZNF335Q9H4Z2 1342 aaPredicted RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 USP42Q9H9J4 1324 aaKnown RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PHF14O94880 888 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 TRIM21P19474 475 aaKnown RBP7.37□□□□□ -1.23
SH3D19-201ENST00000304527 UNC5CLQ8IV45 518 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 RAI14Q9P0K7 980 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 WDR17Q8IZU2 1322 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 ERVV-2B6SEH9 535 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PAF1Q8N7H5 531 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 TFCP2L1Q9NZI6 479 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 CPDO75976 1380 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 HEG1Q9ULI3 1381 aa7.37□□□□□ -1.23
SH3D19-201ENST00000304527 PRPF40AO75400 957 aaKnown RBP7.36□□□□□ -1.23
SH3D19-201ENST00000304527 ZGPATQ8N5A5 531 aaKnown RBP7.36□□□□□ -1.23
SH3D19-201ENST00000304527 JAKMIP1Q96N16 626 aaKnown RBP7.36□□□□□ -1.23
SH3D19-201ENST00000304527 CWC25Q9NXE8 425 aaPredicted RBP7.36□□□□□ -1.23
SH3D19-201ENST00000304527 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
SH3D19-201ENST00000304527 SOGA3Q5TF21 947 aa7.36□□□□□ -1.23
SH3D19-201ENST00000304527 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
SH3D19-201ENST00000304527 JDP2Q8WYK2 163 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms