RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 DICER1Q9UPY3 1922 aaKnown RBP20.44■□□□□ 0.86
SRGAP2C-201ENST00000304465 EXOSC9Q06265 439 aaKnown RBP20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 KSR2Q6VAB6 950 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 LARGE2Q8N3Y3 721 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 SUPT20HQ8NEM7 779 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 APLP1P51693 650 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 TMC4Q7Z404 712 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 SP8Q8IXZ3 490 aa20.43■□□□□ 0.86
SRGAP2C-201ENST00000304465 PI4KAP2A4QPH2 592 aa20.42■□□□□ 0.86
SRGAP2C-201ENST00000304465 EIF6P56537 245 aaKnown RBP20.42■□□□□ 0.86
SRGAP2C-201ENST00000304465 SF3B3Q15393 1217 aaKnown RBP20.42■□□□□ 0.86
SRGAP2C-201ENST00000304465 DPP8Q6V1X1 898 aaPredicted RBP20.42■□□□□ 0.86
SRGAP2C-201ENST00000304465 PI4KAP1Q8N8J0 262 aa20.42■□□□□ 0.86
SRGAP2C-201ENST00000304465 MPNDQ8N594 471 aa20.41■□□□□ 0.86
SRGAP2C-201ENST00000304465 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 POTECB2RU33 542 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 FZD9O00144 591 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 PPIP5K2O43314 1243 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 NIM1KQ8IY84 436 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
SRGAP2C-201ENST00000304465 WDR90Q96KV7 1748 aa20.39■□□□□ 0.86
SRGAP2C-201ENST00000304465 RRP1P56182 461 aaKnown RBP20.39■□□□□ 0.85
SRGAP2C-201ENST00000304465 VAMP4O75379 141 aa20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 CT47B1P0C2W7 299 aaPredicted RBP20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 RARSP54136 660 aaKnown RBP20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 FLIIQ13045 1269 aa20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 L3MBTL3Q96JM7 780 aaPredicted RBP20.38■□□□□ 0.85
SRGAP2C-201ENST00000304465 PDE8AO60658 829 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 AOC3Q16853 763 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 G2E3Q7L622 706 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 SLC51AQ86UW1 340 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 GPC2Q8N158 579 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 LAMB2P55268 1798 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 CELF1Q92879 486 aaKnown RBP20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 HACL1Q9UJ83 578 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
SRGAP2C-201ENST00000304465 BCAR3O75815 825 aa20.36■□□□□ 0.85
SRGAP2C-201ENST00000304465 RTFDC1Q9BY42 306 aaPredicted RBP20.36■□□□□ 0.85
SRGAP2C-201ENST00000304465 IGKV5-2P06315 115 aa20.35■□□□□ 0.85
SRGAP2C-201ENST00000304465 RPS8P62241 208 aaKnown RBP20.35■□□□□ 0.85
SRGAP2C-201ENST00000304465 IRX6P78412 446 aaPredicted RBP20.35■□□□□ 0.85
SRGAP2C-201ENST00000304465 NSFL1CQ9UNZ2 370 aaKnown RBP20.35■□□□□ 0.85
SRGAP2C-201ENST00000304465 DDX60Q8IY21 1712 aaKnown RBP20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 CWF19L2Q2TBE0 894 aaKnown RBP20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 EAPPQ56P03 285 aaPredicted RBP20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 TAF1DQ9H5J8 278 aaPredicted RBP20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 CDHR2Q9BYE9 1310 aa20.34■□□□□ 0.85
SRGAP2C-201ENST00000304465 NEURL1BA8MQ27 555 aa20.33■□□□□ 0.85
SRGAP2C-201ENST00000304465 CHADLQ6NUI6 762 aa20.33■□□□□ 0.85
SRGAP2C-201ENST00000304465 PLIN1O60240 522 aa20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 EPHX2P34913 555 aa20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 KIAA2012Q0VF49 1180 aa20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 PNMA8AQ86V59 439 aaPredicted RBP20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 CCDC85AQ96PX6 553 aaPredicted RBP20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 ZNRF3Q9ULT6 936 aa20.32■□□□□ 0.84
SRGAP2C-201ENST00000304465 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
SRGAP2C-201ENST00000304465 NEFLP07196 543 aa20.31■□□□□ 0.84
SRGAP2C-201ENST00000304465 LDHDQ86WU2 507 aa20.31■□□□□ 0.84
SRGAP2C-201ENST00000304465 SEC31BQ9NQW1 1179 aa20.31■□□□□ 0.84
SRGAP2C-201ENST00000304465 CLEC11AQ9Y240 323 aa20.31■□□□□ 0.84
SRGAP2C-201ENST00000304465 CTSWP56202 376 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 WASHC4Q2M389 1173 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 UBE3BQ7Z3V4 1068 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 LINS1Q8NG48 757 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 SSH1Q8WYL5 1049 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 EYA3Q99504 573 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
SRGAP2C-201ENST00000304465 COL4A5P29400 1685 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 POTEIP0CG38 1075 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 POTEJP0CG39 1038 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 GPSM2P81274 684 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 GCKRQ14397 625 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 SCN4AP35499 1836 aa20.29■□□□□ 0.84
SRGAP2C-201ENST00000304465 H7C1W4 665 aa20.28■□□□□ 0.84
SRGAP2C-201ENST00000304465 TNIP1Q15025 636 aa20.28■□□□□ 0.84
SRGAP2C-201ENST00000304465 TAF1P21675 1872 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 G3V3G9 751 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 BRPF1P55201 1214 aaPredicted RBP20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 HTRA3P83110 453 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 DCAF8Q5TAQ9 597 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 C20orf194Q5TEA3 1177 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 CIAPIN1Q6FI81 312 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 BCL2L13Q9BXK5 485 aa20.27■□□□□ 0.84
SRGAP2C-201ENST00000304465 F6X3S4 739 aa20.26■□□□□ 0.83
SRGAP2C-201ENST00000304465 RIMBP2O15034 1052 aa20.26■□□□□ 0.83
SRGAP2C-201ENST00000304465 CXCL9Q07325 125 aa20.26■□□□□ 0.83
SRGAP2C-201ENST00000304465 TTLL11Q8NHH1 800 aa20.26■□□□□ 0.83
SRGAP2C-201ENST00000304465 ZC3H12CQ9C0D7 883 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms