RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CIAO1O76071 339 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 PARP10Q53GL7 1025 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 ZNF34Q8IZ26 560 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 CNNM1Q9NRU3 951 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 CCNL1Q9UK58 526 aaPredicted RBP17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 SH3TC1Q8TE82 1336 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 KIF2CQ99661 725 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 ITGA6P23229 1130 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 ATG9AQ7Z3C6 839 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 LINC00116Q8NCU8 138 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 PUS3Q9BZE2 481 aaKnown RBP17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 AKAP2Q9Y2D5 859 aa17.57■□□□□ 0.4
SHCBP1-201ENST00000303383 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 CAMTA2O94983 1202 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 PTF1AQ7RTS3 328 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 FBXO3Q9UK99 471 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 UBN2Q6ZU65 1347 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 SGSM2O43147 1006 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 ATP5JP18859 108 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 TIMM10P62072 90 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 TTLL11Q8NHH1 800 aa17.56■□□□□ 0.4
SHCBP1-201ENST00000303383 NUP98P52948 1817 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 CSF1RP07333 972 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 GREM2Q9H772 168 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 GPR108Q9NPR9 543 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 KCNJ4P48050 445 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 SUSD4Q5VX71 490 aa17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 K7ELQ4 463 aaPredicted RBP17.55■□□□□ 0.4
SHCBP1-201ENST00000303383 HCLS1P14317 486 aaPredicted RBP17.54■□□□□ 0.4
SHCBP1-201ENST00000303383 A0A1B0GUL7 405 aa17.54■□□□□ 0.4
SHCBP1-201ENST00000303383 GNPATO15228 680 aa17.53■□□□□ 0.4
SHCBP1-201ENST00000303383 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
SHCBP1-201ENST00000303383 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
SHCBP1-201ENST00000303383 TUBGCP6Q96RT7 1819 aa17.53■□□□□ 0.4
SHCBP1-201ENST00000303383 ZPR1O75312 459 aa17.53■□□□□ 0.4
SHCBP1-201ENST00000303383 CNTNAP4Q9C0A0 1308 aa17.52■□□□□ 0.4
SHCBP1-201ENST00000303383 ANKRD36CQ5JPF3 1778 aa17.52■□□□□ 0.4
SHCBP1-201ENST00000303383 EPB41L2O43491 1005 aaKnown RBP17.52■□□□□ 0.4
SHCBP1-201ENST00000303383 AK7Q96M32 723 aa17.52■□□□□ 0.4
SHCBP1-201ENST00000303383 RTCBQ9Y3I0 505 aaKnown RBP17.52■□□□□ 0.4
SHCBP1-201ENST00000303383 NEK4P51957 841 aa17.52■□□□□ 0.39
SHCBP1-201ENST00000303383 TTC39AQ5SRH9 613 aa17.52■□□□□ 0.39
SHCBP1-201ENST00000303383 CLEC4GQ6UXB4 293 aa17.52■□□□□ 0.39
SHCBP1-201ENST00000303383 MYH14Q7Z406 1995 aaKnown RBP17.52■□□□□ 0.39
SHCBP1-201ENST00000303383 ATRNO75882 1429 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 NPHP1O15259 732 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 ANAPC15P60006 121 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 THSD7AQ9UPZ6 1657 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 NMIQ13287 307 aaPredicted RBP17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 CCDC152Q4G0S7 254 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
SHCBP1-201ENST00000303383 IL25Q9H293 177 aa17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 RPS6KA4O75676 772 aa17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 DDX46Q7L014 1031 aaKnown RBP17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 HAUS7Q99871 368 aa17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 RAD50Q92878 1312 aa17.5■□□□□ 0.39
SHCBP1-201ENST00000303383 ONECUT3O60422 494 aaPredicted RBP17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 ATP2B3Q16720 1220 aa17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 FAM227BQ96M60 508 aa17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 GOLIM4O00461 696 aa17.49■□□□□ 0.39
SHCBP1-201ENST00000303383 ZNF609O15014 1411 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 IGHMBP2P38935 993 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 FKBP4Q02790 459 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 USPL1Q5W0Q7 1092 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 XAGE2Q96GT9 111 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 PALD1Q9ULE6 856 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 BTAF1O14981 1849 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 HSPA4P34932 840 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 NFKBIBQ15653 356 aa17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 LSG1Q9H089 658 aaKnown RBP17.48■□□□□ 0.39
SHCBP1-201ENST00000303383 PHF14O94880 888 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 FAM196AQ6ZSG2 479 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 SMIM5Q71RC9 77 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 KRT27Q7Z3Y8 459 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 NTSR2O95665 410 aa17.47■□□□□ 0.39
SHCBP1-201ENST00000303383 ZKSCAN1P17029 563 aaPredicted RBP17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 RFC4P35249 363 aa17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 NARFQ9UHQ1 456 aa17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 RIPOR2Q9Y4F9 1068 aa17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 LRRFIP1Q32MZ4 808 aaKnown RBP17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 PKNOX2Q96KN3 472 aa17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 MYH3P11055 1940 aa17.46■□□□□ 0.39
SHCBP1-201ENST00000303383 NHSQ6T4R5 1651 aa17.46■□□□□ 0.38
SHCBP1-201ENST00000303383 CCDC171Q6TFL3 1326 aa17.46■□□□□ 0.38
SHCBP1-201ENST00000303383 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SHCBP1-201ENST00000303383 MCM2P49736 904 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms