RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 BCL11AQ9H165 835 aa14.66□□□□□ -0.06
TPM3-202ENST00000302206 NUP98P52948 1817 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 TRIM6-TRIM34B2RNG4 842 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 CIAO1O76071 339 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 CHMLP26374 656 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 ITPK1Q13572 414 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 TSHZ3Q63HK5 1081 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 AACSQ86V21 672 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 NLRP10Q86W26 655 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 DZIP3Q86Y13 1208 aaKnown RBP14.65□□□□□ -0.06
TPM3-202ENST00000302206 CNTROBQ8N137 903 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 JARID2Q92833 1246 aaPredicted RBP14.65□□□□□ -0.06
TPM3-202ENST00000302206 SNX21Q969T3 373 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 USP26Q9BXU7 913 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 GPR108Q9NPR9 543 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 ZNF330Q9Y3S2 320 aaPredicted RBP14.65□□□□□ -0.06
TPM3-202ENST00000302206 KAT6BQ8WYB5 2073 aa14.65□□□□□ -0.06
TPM3-202ENST00000302206 CSF1RP07333 972 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 HLFQ16534 295 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 TXNRD1Q16881 649 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 ZNF34Q8IZ26 560 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 EAF2Q96CJ1 260 aaPredicted RBP14.64□□□□□ -0.07
TPM3-202ENST00000302206 AK7Q96M32 723 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 ARXQ96QS3 562 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 ESYT1Q9BSJ8 1104 aa14.64□□□□□ -0.07
TPM3-202ENST00000302206 AK9Q5TCS8 1911 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 IL15P40933 162 aaPredicted RBP14.63□□□□□ -0.07
TPM3-202ENST00000302206 GPR162Q16538 588 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 RILPL2Q969X0 211 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 KIF2CQ99661 725 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 ANP32EQ9BTT0 268 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 SIL1Q9H173 461 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 CNTNAP4Q9C0A0 1308 aa14.63□□□□□ -0.07
TPM3-202ENST00000302206 TNNI3KQ59H18 835 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 RC3H1Q5TC82 1133 aaKnown RBP14.62□□□□□ -0.07
TPM3-202ENST00000302206 IL27Q8NEV9 243 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 KLHDC4Q8TBB5 520 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 SGIP1Q9BQI5 828 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 TBC1D2Q9BYX2 928 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 FPGT-TNNI3KV9GXZ4 949 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 GOLGB1Q14789 3259 aaKnown RBP14.62□□□□□ -0.07
TPM3-202ENST00000302206 BTAF1O14981 1849 aa14.62□□□□□ -0.07
TPM3-202ENST00000302206 BCORQ6W2J9 1755 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 EYA2O00167 538 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 CAMTA2O94983 1202 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 PARP10Q53GL7 1025 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 ATG9AQ7Z3C6 839 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 EVI5LQ96CN4 794 aa14.61□□□□□ -0.07
TPM3-202ENST00000302206 MYH14Q7Z406 1995 aaKnown RBP14.6□□□□□ -0.07
TPM3-202ENST00000302206 HIP1O00291 1037 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 HSP90B1P14625 803 aaKnown RBP14.6□□□□□ -0.07
TPM3-202ENST00000302206 ATP5JP18859 108 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 TFCP2Q12800 502 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 RABEP1Q15276 862 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 TBC1D2BQ9UPU7 963 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 CHMP3Q9Y3E7 222 aa14.6□□□□□ -0.07
TPM3-202ENST00000302206 CEP350Q5VT06 3117 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 SLC4A3P48751 1232 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 CCDC57Q2TAC2 916 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 CLEC4GQ6UXB4 293 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 IL17RAQ96F46 866 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 FAM89AQ96GI7 184 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 CCDC8Q9H0W5 538 aaPredicted RBP14.59□□□□□ -0.07
TPM3-202ENST00000302206 ZNF652Q9Y2D9 606 aa14.59□□□□□ -0.07
TPM3-202ENST00000302206 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.59□□□□□ -0.07
TPM3-202ENST00000302206 MYH3P11055 1940 aa14.58□□□□□ -0.07
TPM3-202ENST00000302206 LY75O60449 1722 aa14.58□□□□□ -0.07
TPM3-202ENST00000302206 PDE8AO60658 829 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 MCCP23508 829 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 GPTP24298 496 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 CTSWP56202 376 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 ANAPC15P60006 121 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
TPM3-202ENST00000302206 LINC00116Q8NCU8 138 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 RUFY2Q8WXA3 655 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 TRMT112Q9UI30 125 aaKnown RBP14.58□□□□□ -0.08
TPM3-202ENST00000302206 UBN2Q6ZU65 1347 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 RFX7Q2KHR2 1363 aa14.58□□□□□ -0.08
TPM3-202ENST00000302206 IRS4O14654 1257 aaPredicted RBP14.57□□□□□ -0.08
TPM3-202ENST00000302206 SGSM2O43147 1006 aa14.57□□□□□ -0.08
TPM3-202ENST00000302206 IFIT5Q13325 482 aaKnown RBP14.57□□□□□ -0.08
TPM3-202ENST00000302206 TTLL11Q8NHH1 800 aa14.57□□□□□ -0.08
TPM3-202ENST00000302206 TLR7Q9NYK1 1049 aaKnown RBP14.57□□□□□ -0.08
TPM3-202ENST00000302206 DBNLQ9UJU6 430 aaKnown RBP14.57□□□□□ -0.08
TPM3-202ENST00000302206 LAMB2P55268 1798 aa14.57□□□□□ -0.08
TPM3-202ENST00000302206 ZNF609O15014 1411 aa14.57□□□□□ -0.08
TPM3-202ENST00000302206 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
TPM3-202ENST00000302206 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.56□□□□□ -0.08
TPM3-202ENST00000302206 UTP14AQ9BVJ6 771 aaKnown RBP14.56□□□□□ -0.08
TPM3-202ENST00000302206 AKAP2Q9Y2D5 859 aa14.56□□□□□ -0.08
TPM3-202ENST00000302206 SH3TC1Q8TE82 1336 aa14.56□□□□□ -0.08
TPM3-202ENST00000302206 SCN7AQ01118 1682 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 ANKRD18BA2A2Z9 1011 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 RPS6KA4O75676 772 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 MAP4K4O95819 1239 aaPredicted RBP14.55□□□□□ -0.08
TPM3-202ENST00000302206 SNRKQ9NRH2 765 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 DIAPH3Q9NSV4 1193 aa14.55□□□□□ -0.08
TPM3-202ENST00000302206 CEP126Q9P2H0 1117 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 2953.5 ms