RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 IL25Q9H293 177 aa7.95□□□□□ -1.14
DEFB1-201ENST00000297439 ZSWIM6Q9HCJ5 1215 aa7.95□□□□□ -1.14
DEFB1-201ENST00000297439 DIAPH3Q9NSV4 1193 aa7.95□□□□□ -1.14
DEFB1-201ENST00000297439 LIMCH1Q9UPQ0 1083 aa7.95□□□□□ -1.14
DEFB1-201ENST00000297439 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.95□□□□□ -1.14
DEFB1-201ENST00000297439 ARFGEF2Q9Y6D5 1785 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 RIMBP2O15034 1052 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 SASH1O94885 1247 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 G3BP1Q13283 466 aaKnown RBP eCLIP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 OS9Q13438 667 aaPredicted RBP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 PKP1Q13835 747 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 NECTIN1Q15223 517 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 ZSCAN23Q3MJ62 389 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 PAXIP1Q6ZW49 1069 aaPredicted RBP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 MAP4K1Q92918 833 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 SYAP1Q96A49 352 aaPredicted RBP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 RBM33Q96EV2 1170 aaKnown RBP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 PDLIM2Q96JY6 352 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 PANK2Q9BZ23 570 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 BICC1Q9H694 974 aaKnown RBP7.94□□□□□ -1.14
DEFB1-201ENST00000297439 GPR108Q9NPR9 543 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 HMG20BQ9P0W2 317 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 ATP6V1DQ9Y5K8 247 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 CCDC171Q6TFL3 1326 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 SPEF2Q9C093 1822 aa7.94□□□□□ -1.14
DEFB1-201ENST00000297439 NUP188Q5SRE5 1749 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ERVV-2B6SEH9 535 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 CYP27B1O15528 508 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 PHF14O94880 888 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ANXA1P04083 346 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ATP5JP18859 108 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 RFX5P48382 616 aaPredicted RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 NASPP49321 788 aaPredicted RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 CASP7P55210 303 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 CWF19L2Q2TBE0 894 aaKnown RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 USPL1Q5W0Q7 1092 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 LRSAM1Q6UWE0 723 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ANKRD13DQ6ZTN6 518 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 PLBD2Q8NHP8 589 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 GPT2Q8TD30 523 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ANP32BQ92688 251 aaKnown RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 EAF2Q96CJ1 260 aaPredicted RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ZNF496Q96IT1 587 aaPredicted RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ATG3Q9NT62 314 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 NLRP2Q9NX02 1062 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
DEFB1-201ENST00000297439 WDR17Q8IZU2 1322 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 PCDH11XQ9BZA7 1347 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 PCDH11YQ9BZA8 1340 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 KCPQ6ZWJ8 1503 aa7.93□□□□□ -1.14
DEFB1-201ENST00000297439 ABCA3Q99758 1704 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 XIRP1Q702N8 1843 aaKnown RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 ESPNB1AK53 854 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 PRPF40AO75400 957 aaKnown RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 ECM2O94769 699 aaPredicted RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 ZKSCAN1P17029 563 aaPredicted RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 PSMA5P28066 241 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 AK2P54819 239 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 XPCQ01831 940 aaPredicted RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 ANKRD1Q15327 319 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 RNF20Q5VTR2 975 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 AACSQ86V21 672 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 TTC5Q8N0Z6 440 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 FAM184AQ8NB25 1140 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 XAGE3Q8WTP9 111 aa7.92□□□□□ -1.14
DEFB1-201ENST00000297439 UPF3BQ9BZI7 483 aaKnown RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 RRAGDQ9NQL2 400 aaPredicted RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 COL5A2P05997 1499 aaPredicted RBP7.92□□□□□ -1.14
DEFB1-201ENST00000297439 ZBTB7CA1YPR0 619 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 PRAMEF22A3QJZ6 481 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 H7C1W4 665 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 LETM1O95202 739 aaPredicted RBP7.91□□□□□ -1.14
DEFB1-201ENST00000297439 ZSCAN22P10073 491 aaPredicted RBP7.91□□□□□ -1.14
DEFB1-201ENST00000297439 ZC3H6P61129 1189 aaKnown RBP7.91□□□□□ -1.14
DEFB1-201ENST00000297439 KRT32Q14532 448 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 CSPP1Q1MSJ5 1256 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 CAVIN1Q6NZI2 390 aaKnown RBP7.91□□□□□ -1.14
DEFB1-201ENST00000297439 LMOD2Q6P5Q4 547 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 CWC27Q6UX04 472 aaKnown RBP7.91□□□□□ -1.14
DEFB1-201ENST00000297439 RUFY3Q7L099 469 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 COPS6Q7L5N1 327 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 CYP46A1Q9Y6A2 500 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 PALLDQ8WX93 1383 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 LRP6O75581 1613 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 TJP1Q07157 1748 aa7.91□□□□□ -1.14
DEFB1-201ENST00000297439 SHANK3Q9BYB0 1731 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 ABCC12Q96J65 1359 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 RIOK3O14730 519 aaKnown RBP7.9□□□□□ -1.14
DEFB1-201ENST00000297439 STX6O43752 255 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 PDCP20941 246 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 MCM5P33992 734 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 PTPN12Q05209 780 aaKnown RBP7.9□□□□□ -1.14
DEFB1-201ENST00000297439 CREB3L3Q68CJ9 461 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.9□□□□□ -1.14
DEFB1-201ENST00000297439 TRIM44Q96DX7 344 aaPredicted RBP7.9□□□□□ -1.14
DEFB1-201ENST00000297439 CARD10Q9BWT7 1032 aa7.9□□□□□ -1.14
DEFB1-201ENST00000297439 TMEM63CQ9P1W3 806 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms