RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 MCCP23508 829 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 CHMP5Q9NZZ3 219 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 RTL9Q8NET4 1388 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 K7ELQ4 463 aaPredicted RBP11.13□□□□□ -0.63
PDPN-201ENST00000294489 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 TNNI3KQ59H18 835 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 AACSQ86V21 672 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 FPGT-TNNI3KV9GXZ4 949 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 RGPD3A6NKT7 1758 aaPredicted RBP11.13□□□□□ -0.63
PDPN-201ENST00000294489 RGPD4Q7Z3J3 1758 aa11.13□□□□□ -0.63
PDPN-201ENST00000294489 IL15P40933 162 aaPredicted RBP11.12□□□□□ -0.63
PDPN-201ENST00000294489 FAM89AQ96GI7 184 aa11.12□□□□□ -0.63
PDPN-201ENST00000294489 ZNF330Q9Y3S2 320 aaPredicted RBP11.12□□□□□ -0.63
PDPN-201ENST00000294489 EYA2O00167 538 aa11.12□□□□□ -0.63
PDPN-201ENST00000294489 FRAT2O75474 233 aaPredicted RBP11.12□□□□□ -0.63
PDPN-201ENST00000294489 TFCP2Q12800 502 aa11.12□□□□□ -0.63
PDPN-201ENST00000294489 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
PDPN-201ENST00000294489 SIL1Q9H173 461 aa11.12□□□□□ -0.63
PDPN-201ENST00000294489 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 CTSWP56202 376 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 ST18O60284 1047 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 PDE8AO60658 829 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 SUSD4Q5VX71 490 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 ANO2Q9NQ90 1003 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
PDPN-201ENST00000294489 RIC1Q4ADV7 1423 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 NTSR2O95665 410 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 ATP5JP18859 108 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 GPTP24298 496 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
PDPN-201ENST00000294489 MAP4K4O95819 1239 aaPredicted RBP11.1□□□□□ -0.63
PDPN-201ENST00000294489 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
PDPN-201ENST00000294489 DBNLQ9UJU6 430 aaKnown RBP11.1□□□□□ -0.63
PDPN-201ENST00000294489 IRS4O14654 1257 aaPredicted RBP11.1□□□□□ -0.63
PDPN-201ENST00000294489 EVI5LQ96CN4 794 aa11.1□□□□□ -0.63
PDPN-201ENST00000294489 TRMT112Q9UI30 125 aaKnown RBP11.1□□□□□ -0.63
PDPN-201ENST00000294489 A0A0G2JS52 829 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 CD2BP2O95400 341 aaKnown RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 FAM196AQ6ZSG2 479 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 BCL2L12Q9HB09 334 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 ZNF652Q9Y2D9 606 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 TNS1Q9HBL0 1735 aaKnown RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 CCDC57Q2TAC2 916 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 LRRC24Q50LG9 513 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 ZNF772Q68DY9 489 aaPredicted RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 NARFQ9UHQ1 456 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 SH3TC1Q8TE82 1336 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 DEKP35659 375 aaKnown RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 ANAPC15P60006 121 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 FAM182BQ5T319 152 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDPN-201ENST00000294489 RUFY2Q8WXA3 655 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 CCNL1Q9UK58 526 aaPredicted RBP11.09□□□□□ -0.63
PDPN-201ENST00000294489 ABCC12Q96J65 1359 aa11.09□□□□□ -0.63
PDPN-201ENST00000294489 AKAP11Q9UKA4 1901 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 ZNF594Q96JF6 807 aaPredicted RBP11.08□□□□□ -0.64
PDPN-201ENST00000294489 SGSM2O43147 1006 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
PDPN-201ENST00000294489 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 PUS3Q9BZE2 481 aaKnown RBP11.08□□□□□ -0.64
PDPN-201ENST00000294489 GREM2Q9H772 168 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 DIAPH3Q9NSV4 1193 aa11.08□□□□□ -0.64
PDPN-201ENST00000294489 HSP90B1P14625 803 aaKnown RBP11.07□□□□□ -0.64
PDPN-201ENST00000294489 RBM6P78332 1123 aaKnown RBP11.07□□□□□ -0.64
PDPN-201ENST00000294489 SLC10A5Q5PT55 438 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 HAUS7Q99871 368 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 CHMP3Q9Y3E7 222 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 COL4A1P02462 1669 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 ITGA6P23229 1130 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 IL25Q9H293 177 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 MYH7P12883 1935 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 DDIT3P35638 169 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 IL27Q8NEV9 243 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 ARXQ96QS3 562 aa11.07□□□□□ -0.64
PDPN-201ENST00000294489 ANKRD18BA2A2Z9 1011 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 HIP1O00291 1037 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 KCNQ4P56696 695 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 NIP7Q9Y221 180 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDPN-201ENST00000294489 MCM2P49736 904 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
PDPN-201ENST00000294489 AMIGO3Q86WK7 504 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 LRRC4BQ9NT99 713 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 AKAP2Q9Y2D5 859 aa11.06□□□□□ -0.64
PDPN-201ENST00000294489 ADRA2BP18089 450 aa11.05□□□□□ -0.64
PDPN-201ENST00000294489 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
PDPN-201ENST00000294489 LSG1Q9H089 658 aaKnown RBP11.05□□□□□ -0.64
PDPN-201ENST00000294489 RAD50Q92878 1312 aa11.05□□□□□ -0.64
PDPN-201ENST00000294489 DOCK2Q92608 1830 aa11.05□□□□□ -0.64
PDPN-201ENST00000294489 NEK4P51957 841 aa11.05□□□□□ -0.64
PDPN-201ENST00000294489 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms