RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 FERP16591 822 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 TCP11L1Q9NUJ3 509 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 FAM114A1Q8IWE2 563 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 ATRIPQ8WXE1 791 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 SYKP43405 635 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 IKBKGQ9Y6K9 419 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 DNMBPQ6XZF7 1577 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 TSPY2A6NKD2 308 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 SEPT6Q14141 434 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 KIAA0753Q2KHM9 967 aa18.43■□□□□ 0.54
SSRP1-202ENST00000293880 KIF4AO95239 1232 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 TTC12Q9H892 705 aaPredicted RBP18.42■□□□□ 0.54
SSRP1-202ENST00000293880 C6orf163Q5TEZ5 329 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 CFAP57Q96MR6 1250 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 PLEKHH2Q8IVE3 1493 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 RHOXF2BP0C7M4 288 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 TSNARE1Q96NA8 513 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 RHOXF2Q9BQY4 288 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 CA8P35219 290 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 MRVI1Q9Y6F6 885 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 DAPK1P53355 1430 aa18.42■□□□□ 0.54
SSRP1-202ENST00000293880 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
SSRP1-202ENST00000293880 ANXA1P04083 346 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 AMPD3Q01432 767 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CCDC63Q8NA47 563 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 STAT6P42226 847 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 AKNAD1Q5T1N1 836 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 MFSD6Q6ZSS7 791 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 DDX46Q7L014 1031 aaKnown RBP18.41■□□□□ 0.54
SSRP1-202ENST00000293880 PHACTR2O75167 634 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 ECM2O94769 699 aaPredicted RBP18.41■□□□□ 0.54
SSRP1-202ENST00000293880 RPGRQ92834 1020 aaKnown RBP18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CCDC171Q6TFL3 1326 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CCDC102BQ68D86 513 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CTAGE15A4D2H0 777 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CTAGE8P0CG41 777 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CHST3Q7LGC8 479 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CTAGE6Q86UF2 777 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CTAGE4Q8IX94 777 aa18.41■□□□□ 0.54
SSRP1-202ENST00000293880 CDK13Q14004 1512 aaKnown RBP18.41■□□□□ 0.54
SSRP1-202ENST00000293880 GSTA5Q7RTV2 222 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 CCDC155Q8N6L0 562 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 HFM1A2PYH4 1435 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 SUPT6HQ7KZ85 1726 aaKnown RBP18.4■□□□□ 0.54
SSRP1-202ENST00000293880 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 SYT1P21579 422 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 HEATR3Q7Z4Q2 680 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 DNM1Q05193 864 aaKnown RBP18.4■□□□□ 0.54
SSRP1-202ENST00000293880 OTUD6BQ8N6M0 293 aa18.4■□□□□ 0.54
SSRP1-202ENST00000293880 IFT81Q8WYA0 676 aa18.39■□□□□ 0.54
SSRP1-202ENST00000293880 CEP83Q9Y592 693 aa18.39■□□□□ 0.54
SSRP1-202ENST00000293880 MRPS9P82933 396 aaKnown RBP18.39■□□□□ 0.53
SSRP1-202ENST00000293880 Q6ZUG5 572 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
SSRP1-202ENST00000293880 DNAI2Q9GZS0 605 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 LZTFL1Q9NQ48 299 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 TBC1D32Q96NH3 1257 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 ZNF652Q9Y2D9 606 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 FBLN1P23142 703 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 PLIN2Q99541 437 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 AKR1B10O60218 316 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.53
SSRP1-202ENST00000293880 PPP1R42Q7Z4L9 355 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 BRF1Q92994 677 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 RNF41Q9H4P4 317 aaPredicted RBP18.39■□□□□ 0.53
SSRP1-202ENST00000293880 IQSEC3Q9UPP2 1182 aaPredicted RBP18.39■□□□□ 0.53
SSRP1-202ENST00000293880 SBNO2Q9Y2G9 1366 aa18.39■□□□□ 0.53
SSRP1-202ENST00000293880 FLIIQ13045 1269 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 CCDC50Q8IVM0 306 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 DHX58Q96C10 678 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 ARHGEF11O15085 1522 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 KIF20AO95235 890 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 PDIA4P13667 645 aaKnown RBP18.38■□□□□ 0.53
SSRP1-202ENST00000293880 CKAP4Q07065 602 aaKnown RBP18.38■□□□□ 0.53
SSRP1-202ENST00000293880 TBC1D5Q92609 795 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 EHMT1Q9H9B1 1298 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 ZEB2O60315 1214 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 PLS1Q14651 629 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 UVSSAQ2YD98 709 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 PRIMPOLQ96LW4 560 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 UBA7P41226 1012 aa18.38■□□□□ 0.53
SSRP1-202ENST00000293880 FBXO31Q5XUX0 539 aaPredicted RBP18.38■□□□□ 0.53
SSRP1-202ENST00000293880 NAIPQ13075 1403 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 STX17P56962 302 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 CETN1Q12798 172 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 KLHL40Q2TBA0 621 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 CPSF2Q9P2I0 782 aaKnown RBP18.37■□□□□ 0.53
SSRP1-202ENST00000293880 CAPN2P17655 700 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 ALG1Q9BT22 464 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.37■□□□□ 0.532e-8■■■□□ 18.1
SSRP1-202ENST00000293880 PRIM1P49642 420 aaKnown RBP18.37■□□□□ 0.53
SSRP1-202ENST00000293880 SARNPP82979 210 aaKnown RBP18.37■□□□□ 0.53
SSRP1-202ENST00000293880 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 HECW1Q76N89 1606 aa18.37■□□□□ 0.53
SSRP1-202ENST00000293880 TBCAO75347 108 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms