RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ISCA1Q9BUE6 129 aa11.54□□□□□ -0.56
TFF1-201ENST00000291527 RTFDC1Q9BY42 306 aaPredicted RBP11.54□□□□□ -0.56
TFF1-201ENST00000291527 PHAXQ9H814 394 aaKnown RBP11.54□□□□□ -0.56
TFF1-201ENST00000291527 MBIPQ9NS73 344 aa11.54□□□□□ -0.56
TFF1-201ENST00000291527 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
TFF1-201ENST00000291527 WTIPA6NIX2 430 aaPredicted RBP11.53□□□□□ -0.56
TFF1-201ENST00000291527 APAF1O14727 1248 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 HDGFL1Q5TGJ6 251 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 DUSP27Q5VZP5 1158 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 SP8Q8IXZ3 490 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 NIM1KQ8IY84 436 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 TRPM4Q8TD43 1214 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
TFF1-201ENST00000291527 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
TFF1-201ENST00000291527 RASSF10A6NK89 507 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 EGFRP00533 1210 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 LBX1P52954 281 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 GRAPQ13588 217 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 DEFB115Q30KQ5 88 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 DPP8Q6V1X1 898 aaPredicted RBP11.52□□□□□ -0.57
TFF1-201ENST00000291527 ANKRD13DQ6ZTN6 518 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 PNMA8AQ86V59 439 aaPredicted RBP11.52□□□□□ -0.57
TFF1-201ENST00000291527 MPNDQ8N594 471 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 C8orf58Q8NAV2 365 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 PLBD2Q8NHP8 589 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 GRAPLQ8TC17 118 aaPredicted RBP11.52□□□□□ -0.57
TFF1-201ENST00000291527 GLIS2Q9BZE0 524 aaPredicted RBP11.52□□□□□ -0.57
TFF1-201ENST00000291527 PRKRIP1Q9H875 184 aaPredicted RBP11.52□□□□□ -0.57
TFF1-201ENST00000291527 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 POLLQ9UGP5 575 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 SH3TC1Q8TE82 1336 aa11.52□□□□□ -0.57
TFF1-201ENST00000291527 CASP8AP2Q9UKL3 1982 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 AOC2O75106 756 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 BBOX1O75936 387 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 GPSM2P81274 684 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 LMOD3Q0VAK6 560 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 KIAA2012Q0VF49 1180 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 TSPYL6Q8N831 410 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 SEC31BQ9NQW1 1179 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 ZNRF3Q9ULT6 936 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 WDR33Q9C0J8 1336 aaKnown RBP11.51□□□□□ -0.57
TFF1-201ENST00000291527 SPEF2Q9C093 1822 aa11.51□□□□□ -0.57
TFF1-201ENST00000291527 HSPA8P11142 646 aaKnown RBP11.5□□□□□ -0.57
TFF1-201ENST00000291527 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
TFF1-201ENST00000291527 GRM1Q13255 1194 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
TFF1-201ENST00000291527 DOK7Q18PE1 504 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
TFF1-201ENST00000291527 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 CCDC85AQ96PX6 553 aaPredicted RBP11.5□□□□□ -0.57
TFF1-201ENST00000291527 ZIC5Q96T25 663 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 DBNDD1Q9H9R9 158 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
TFF1-201ENST00000291527 ABT1Q9ULW3 272 aaKnown RBP11.5□□□□□ -0.57
TFF1-201ENST00000291527 HSP90AB3PQ58FF7 597 aa11.49□□□□□ -0.57
TFF1-201ENST00000291527 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
TFF1-201ENST00000291527 USP50Q70EL3 339 aaPredicted RBP11.49□□□□□ -0.57
TFF1-201ENST00000291527 SAMD7Q7Z3H4 446 aa11.49□□□□□ -0.57
TFF1-201ENST00000291527 ADARB2Q9NS39 739 aaKnown RBP11.49□□□□□ -0.57
TFF1-201ENST00000291527 ASTN2O75129 1339 aaPredicted RBP11.49□□□□□ -0.57
TFF1-201ENST00000291527 THSD7BQ9C0I4 1608 aa11.49□□□□□ -0.57
TFF1-201ENST00000291527 PSMD14O00487 310 aa11.48□□□□□ -0.57
TFF1-201ENST00000291527 IRS4O14654 1257 aaPredicted RBP11.48□□□□□ -0.57
TFF1-201ENST00000291527 SF3B3Q15393 1217 aaKnown RBP11.48□□□□□ -0.57
TFF1-201ENST00000291527 CAPNS2Q96L46 248 aa11.48□□□□□ -0.57
TFF1-201ENST00000291527 MYD88Q99836 296 aa11.48□□□□□ -0.57
TFF1-201ENST00000291527 DBF4Q9UBU7 674 aaPredicted RBP11.48□□□□□ -0.57
TFF1-201ENST00000291527 PGAP2Q9UHJ9 254 aa11.48□□□□□ -0.57
TFF1-201ENST00000291527 CNOT7Q9UIV1 285 aaKnown RBP11.48□□□□□ -0.57
TFF1-201ENST00000291527 RTL9Q8NET4 1388 aa11.48□□□□□ -0.57
TFF1-201ENST00000291527 GRIPAP1Q4V328 841 aa11.47□□□□□ -0.57
TFF1-201ENST00000291527 USP48Q86UV5 1035 aa11.47□□□□□ -0.57
TFF1-201ENST00000291527 TSR2Q969E8 191 aaKnown RBP11.47□□□□□ -0.57
TFF1-201ENST00000291527 NSFL1CQ9UNZ2 370 aaKnown RBP11.47□□□□□ -0.57
TFF1-201ENST00000291527 TLL2Q9Y6L7 1015 aa11.47□□□□□ -0.57
TFF1-201ENST00000291527 ZNF646O15015 1829 aaPredicted RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 CELF2O95319 508 aaKnown RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 CTCFP49711 727 aaPredicted RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 TRIM28Q13263 835 aaKnown RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 TBC1D10BQ4KMP7 808 aaPredicted RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 PAXIP1Q6ZW49 1069 aaPredicted RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 G2E3Q7L622 706 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 MICALL2Q8IY33 904 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 SUPT20HQ8NEM7 779 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 TBC1D16Q8TBP0 767 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 BCL2L13Q9BXK5 485 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 VPS33BQ9H267 617 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 ZNF408Q9H9D4 720 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 PRDM10Q9NQV6 1147 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 HYPKQ9NX55 129 aa11.46□□□□□ -0.57
TFF1-201ENST00000291527 SCAF8Q9UPN6 1271 aaKnown RBP11.46□□□□□ -0.57
TFF1-201ENST00000291527 PSME4Q14997 1843 aa11.45□□□□□ -0.58
TFF1-201ENST00000291527 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
TFF1-201ENST00000291527 ECE2O60344 883 aa11.45□□□□□ -0.58
TFF1-201ENST00000291527 IGKV5-2P06315 115 aa11.45□□□□□ -0.58
TFF1-201ENST00000291527 HOXB7P09629 217 aa11.45□□□□□ -0.58
TFF1-201ENST00000291527 WASHC4Q2M389 1173 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms