RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 PPIP5K2O43314 1243 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 DDX58O95786 925 aaKnown RBP13.48□□□□□ -0.25
SNF8-201ENST00000290330 AOC3Q16853 763 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
SNF8-201ENST00000290330 DPP8Q6V1X1 898 aaPredicted RBP13.48□□□□□ -0.25
SNF8-201ENST00000290330 MPNDQ8N594 471 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 CCDC191Q8NCU4 936 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
SNF8-201ENST00000290330 HACL1Q9UJ83 578 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 SALL2Q9Y467 1007 aaPredicted RBP13.48□□□□□ -0.25
SNF8-201ENST00000290330 LAMB2P55268 1798 aa13.48□□□□□ -0.25
SNF8-201ENST00000290330 EPHX2P34913 555 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 KSR2Q6VAB6 950 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 TMC4Q7Z404 712 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 LDHDQ86WU2 507 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 NIM1KQ8IY84 436 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 CELF1Q92879 486 aaKnown RBP13.47□□□□□ -0.25
SNF8-201ENST00000290330 KLRG1Q96E93 195 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 STK31Q9BXU1 1019 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 MAP3K2Q9Y2U5 619 aa13.47□□□□□ -0.25
SNF8-201ENST00000290330 SCN4AP35499 1836 aa13.46□□□□□ -0.25
SNF8-201ENST00000290330 PI4KAP2A4QPH2 592 aa13.46□□□□□ -0.25
SNF8-201ENST00000290330 PCCAP05165 728 aaPredicted RBP13.46□□□□□ -0.25
SNF8-201ENST00000290330 WDR63Q8IWG1 891 aa13.46□□□□□ -0.25
SNF8-201ENST00000290330 PI4KAP1Q8N8J0 262 aa13.46□□□□□ -0.25
SNF8-201ENST00000290330 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.25
SNF8-201ENST00000290330 FANCIQ9NVI1 1328 aa13.45□□□□□ -0.26
SNF8-201ENST00000290330 DDX60Q8IY21 1712 aaKnown RBP13.45□□□□□ -0.26
SNF8-201ENST00000290330 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
SNF8-201ENST00000290330 HSP90B1P14625 803 aaKnown RBP13.45□□□□□ -0.26
SNF8-201ENST00000290330 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
SNF8-201ENST00000290330 EAPPQ56P03 285 aaPredicted RBP13.45□□□□□ -0.26
SNF8-201ENST00000290330 PNMA8AQ86V59 439 aaPredicted RBP13.45□□□□□ -0.26
SNF8-201ENST00000290330 FAM9BQ8IZU0 186 aa13.45□□□□□ -0.26
SNF8-201ENST00000290330 CWC25Q9NXE8 425 aaPredicted RBP13.45□□□□□ -0.26
SNF8-201ENST00000290330 ZNRF3Q9ULT6 936 aa13.45□□□□□ -0.26
SNF8-201ENST00000290330 IGKV5-2P06315 115 aa13.44□□□□□ -0.26
SNF8-201ENST00000290330 SCNN1DP51172 638 aa13.44□□□□□ -0.26
SNF8-201ENST00000290330 RPS8P62241 208 aaKnown RBP13.44□□□□□ -0.26
SNF8-201ENST00000290330 G2E3Q7L622 706 aa13.44□□□□□ -0.26
SNF8-201ENST00000290330 JMYQ8N9B5 988 aa13.44□□□□□ -0.26
SNF8-201ENST00000290330 JARID2Q92833 1246 aaPredicted RBP13.44□□□□□ -0.26
SNF8-201ENST00000290330 NSFL1CQ9UNZ2 370 aaKnown RBP13.44□□□□□ -0.26
SNF8-201ENST00000290330 PDE8AO60658 829 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 VAMP4O75379 141 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
SNF8-201ENST00000290330 TAF1P21675 1872 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 EPS15P42566 896 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 CXCL9Q07325 125 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 SPINK5Q9NQ38 1064 aaPredicted RBP13.43□□□□□ -0.26
SNF8-201ENST00000290330 SEC31BQ9NQW1 1179 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 COL4A1P02462 1669 aa13.43□□□□□ -0.26
SNF8-201ENST00000290330 PASKQ96RG2 1323 aa13.42□□□□□ -0.26
SNF8-201ENST00000290330 DUOX1Q9NRD9 1551 aa13.42□□□□□ -0.26
SNF8-201ENST00000290330 LMOD1P29536 600 aaPredicted RBP13.42□□□□□ -0.26
SNF8-201ENST00000290330 EXOSC9Q06265 439 aaKnown RBP13.42□□□□□ -0.26
SNF8-201ENST00000290330 NEXNQ0ZGT2 675 aa13.42□□□□□ -0.26
SNF8-201ENST00000290330 CREBZFQ9NS37 354 aa13.42□□□□□ -0.26
SNF8-201ENST00000290330 CDHR2Q9BYE9 1310 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 GPSM2P81274 684 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 FLIIQ13045 1269 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 WASHC4Q2M389 1173 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 CWF19L2Q2TBE0 894 aaKnown RBP13.41□□□□□ -0.26
SNF8-201ENST00000290330 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 POLLQ9UGP5 575 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
SNF8-201ENST00000290330 ADAMTSL1Q8N6G6 1762 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 LTBP1Q14766 1721 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 YDJCA8MPS7 323 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 NEURL1BA8MQ27 555 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
SNF8-201ENST00000290330 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 CCDC85AQ96PX6 553 aaPredicted RBP13.4□□□□□ -0.26
SNF8-201ENST00000290330 GPRC5DQ9NZD1 345 aa13.4□□□□□ -0.26
SNF8-201ENST00000290330 C6orf229H3BNL8 230 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 H7C1W4 665 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 RAD17O75943 681 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 GMPSP49915 693 aaPredicted RBP13.39□□□□□ -0.27
SNF8-201ENST00000290330 FKBP5Q13451 457 aaPredicted RBP13.39□□□□□ -0.27
SNF8-201ENST00000290330 TNIP1Q15025 636 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 USP50Q70EL3 339 aaPredicted RBP13.39□□□□□ -0.27
SNF8-201ENST00000290330 TBC1D16Q8TBP0 767 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 MYH16Q9H6N6 1097 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 PODXL2Q9NZ53 605 aa13.39□□□□□ -0.27
SNF8-201ENST00000290330 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 CTSWP56202 376 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 TTLL11Q8NHH1 800 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 DNAAF4Q8WXU2 420 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 EYA3Q99504 573 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 DBNDD1Q9H9R9 158 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
SNF8-201ENST00000290330 ZNF521Q96K83 1311 aa13.38□□□□□ -0.27
SNF8-201ENST00000290330 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
SNF8-201ENST00000290330 GCKRQ14397 625 aa13.37□□□□□ -0.27
SNF8-201ENST00000290330 LINS1Q8NG48 757 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms