RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 TAF1P21675 1872 aa12.33□□□□□ -0.44
HMHB1-201ENST00000289448 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
HMHB1-201ENST00000289448 IRS4O14654 1257 aaPredicted RBP12.32□□□□□ -0.44
HMHB1-201ENST00000289448 ANP32CO43423 234 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
HMHB1-201ENST00000289448 EPS15P42566 896 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 SCNN1DP51172 638 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 CCDC30Q5VVM6 783 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 MPNDQ8N594 471 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
HMHB1-201ENST00000289448 JARID2Q92833 1246 aaPredicted RBP12.32□□□□□ -0.44
HMHB1-201ENST00000289448 SCN4AP35499 1836 aa12.32□□□□□ -0.44
HMHB1-201ENST00000289448 DDX60Q8IY21 1712 aaKnown RBP12.31□□□□□ -0.44
HMHB1-201ENST00000289448 G2E3Q7L622 706 aa12.31□□□□□ -0.44
HMHB1-201ENST00000289448 NIM1KQ8IY84 436 aa12.31□□□□□ -0.44
HMHB1-201ENST00000289448 METTL22Q9BUU2 404 aaPredicted RBP12.31□□□□□ -0.44
HMHB1-201ENST00000289448 TMX4Q9H1E5 349 aaPredicted RBP12.31□□□□□ -0.44
HMHB1-201ENST00000289448 VPS33BQ9H267 617 aa12.31□□□□□ -0.44
HMHB1-201ENST00000289448 SALL2Q9Y467 1007 aaPredicted RBP12.31□□□□□ -0.44
HMHB1-201ENST00000289448 LTBP1Q14766 1721 aa12.31□□□□□ -0.44
HMHB1-201ENST00000289448 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 CXCL9Q07325 125 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 TWISTNBQ3B726 338 aaPredicted RBP12.3□□□□□ -0.44
HMHB1-201ENST00000289448 NCBP3Q53F19 620 aaKnown RBP12.3□□□□□ -0.44
HMHB1-201ENST00000289448 MAP1SQ66K74 1059 aaPredicted RBP12.3□□□□□ -0.44
HMHB1-201ENST00000289448 CCDC191Q8NCU4 936 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 SUPT20HQ8NEM7 779 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 MAP3K2Q9Y2U5 619 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 IL16Q14005 1332 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 ADAMTSL1Q8N6G6 1762 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 DUOX1Q9NRD9 1551 aa12.3□□□□□ -0.44
HMHB1-201ENST00000289448 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
HMHB1-201ENST00000289448 GPSM2P81274 684 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
HMHB1-201ENST00000289448 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 SPINK5Q9NQ38 1064 aaPredicted RBP12.29□□□□□ -0.44
HMHB1-201ENST00000289448 CWC25Q9NXE8 425 aaPredicted RBP12.29□□□□□ -0.44
HMHB1-201ENST00000289448 POLLQ9UGP5 575 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
HMHB1-201ENST00000289448 YDJCA8MPS7 323 aa12.28□□□□□ -0.44
HMHB1-201ENST00000289448 DDX58O95786 925 aaKnown RBP12.28□□□□□ -0.44
HMHB1-201ENST00000289448 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
HMHB1-201ENST00000289448 RPS8P62241 208 aaKnown RBP12.28□□□□□ -0.44
HMHB1-201ENST00000289448 CNTROBQ8N137 903 aa12.28□□□□□ -0.44
HMHB1-201ENST00000289448 MKRN1Q9UHC7 482 aaKnown RBP12.28□□□□□ -0.44
HMHB1-201ENST00000289448 NSFL1CQ9UNZ2 370 aaKnown RBP12.28□□□□□ -0.44
HMHB1-201ENST00000289448 RAD17O75943 681 aa12.27□□□□□ -0.45
HMHB1-201ENST00000289448 LMOD1P29536 600 aaPredicted RBP12.27□□□□□ -0.45
HMHB1-201ENST00000289448 GMPSP49915 693 aaPredicted RBP12.27□□□□□ -0.45
HMHB1-201ENST00000289448 FMR1Q06787 632 aaKnown RBP eCLIP12.27□□□□□ -0.45
HMHB1-201ENST00000289448 GPR101Q96P66 508 aaPredicted RBP12.27□□□□□ -0.45
HMHB1-201ENST00000289448 CCDC85AQ96PX6 553 aaPredicted RBP12.27□□□□□ -0.45
HMHB1-201ENST00000289448 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
HMHB1-201ENST00000289448 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.45
HMHB1-201ENST00000289448 GPRC5DQ9NZD1 345 aa12.27□□□□□ -0.45
HMHB1-201ENST00000289448 LRRC37AA6NMS7 1700 aa12.27□□□□□ -0.45
HMHB1-201ENST00000289448 SHTN1A0MZ66 631 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 PDE8AO60658 829 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 VAMP4O75379 141 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 CWF19L2Q2TBE0 894 aaKnown RBP12.26□□□□□ -0.45
HMHB1-201ENST00000289448 IFFO2Q5TF58 517 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 CIAPIN1Q6FI81 312 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 WDR63Q8IWG1 891 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 FAM9BQ8IZU0 186 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
HMHB1-201ENST00000289448 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 NEURL1BA8MQ27 555 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 C6orf229H3BNL8 230 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 RIMBP2O15034 1052 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 EXOSC9Q06265 439 aaKnown RBP12.25□□□□□ -0.45
HMHB1-201ENST00000289448 WASHC4Q2M389 1173 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 USP50Q70EL3 339 aaPredicted RBP12.25□□□□□ -0.45
HMHB1-201ENST00000289448 TBC1D16Q8TBP0 767 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 KCNQ5Q9NR82 932 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 CDHR2Q9BYE9 1310 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 CNTNAP1P78357 1384 aa12.25□□□□□ -0.45
HMHB1-201ENST00000289448 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
HMHB1-201ENST00000289448 TRAF5O00463 557 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
HMHB1-201ENST00000289448 FLIIQ13045 1269 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 TNIP1Q15025 636 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 DOK7Q18PE1 504 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
HMHB1-201ENST00000289448 PODXL2Q9NZ53 605 aa12.24□□□□□ -0.45
HMHB1-201ENST00000289448 ZBTB12Q9Y330 459 aaPredicted RBP12.24□□□□□ -0.45
HMHB1-201ENST00000289448 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 H7C1W4 665 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 PSMD14O00487 310 aa12.23□□□□□ -0.45
HMHB1-201ENST00000289448 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
HMHB1-201ENST00000289448 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
HMHB1-201ENST00000289448 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms