RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 ABT1Q9ULW3 272 aaKnown RBP18.18■□□□□ 0.5
TPM1-202ENST00000288398 ATP5J2-PTCD1G3V325 749 aa18.17■□□□□ 0.5
TPM1-202ENST00000288398 APAF1O14727 1248 aa18.17■□□□□ 0.5
TPM1-202ENST00000288398 EPS15P42566 896 aa18.17■□□□□ 0.5
TPM1-202ENST00000288398 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
TPM1-202ENST00000288398 RTFDC1Q9BY42 306 aaPredicted RBP18.17■□□□□ 0.5
TPM1-202ENST00000288398 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
TPM1-202ENST00000288398 SCNN1DP51172 638 aa18.16■□□□□ 0.5
TPM1-202ENST00000288398 TNIP1Q15025 636 aa18.16■□□□□ 0.5
TPM1-202ENST00000288398 CIAPIN1Q6FI81 312 aa18.16■□□□□ 0.5
TPM1-202ENST00000288398 SLC51AQ86UW1 340 aa18.16■□□□□ 0.5
TPM1-202ENST00000288398 FAM89AQ96GI7 184 aa18.16■□□□□ 0.5
TPM1-202ENST00000288398 ADARB2Q9NS39 739 aaKnown RBP18.16■□□□□ 0.5
TPM1-202ENST00000288398 COL4A5P29400 1685 aa18.15■□□□□ 0.5
TPM1-202ENST00000288398 KIAA2012Q0VF49 1180 aa18.15■□□□□ 0.5
TPM1-202ENST00000288398 DEFB115Q30KQ5 88 aa18.15■□□□□ 0.5
TPM1-202ENST00000288398 RTL5Q5HYW3 569 aaPredicted RBP18.15■□□□□ 0.5
TPM1-202ENST00000288398 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
TPM1-202ENST00000288398 ISCA1Q9BUE6 129 aa18.15■□□□□ 0.5
TPM1-202ENST00000288398 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
TPM1-202ENST00000288398 CAPN15O75808 1086 aa18.14■□□□□ 0.49
TPM1-202ENST00000288398 VEGFBP49765 207 aa18.14■□□□□ 0.49
TPM1-202ENST00000288398 CXCL9Q07325 125 aa18.14■□□□□ 0.49
TPM1-202ENST00000288398 GPRC5DQ9NZD1 345 aa18.14■□□□□ 0.49
TPM1-202ENST00000288398 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.49
TPM1-202ENST00000288398 IRS4O14654 1257 aaPredicted RBP18.13■□□□□ 0.49
TPM1-202ENST00000288398 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
TPM1-202ENST00000288398 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
TPM1-202ENST00000288398 LAMB2P55268 1798 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 C6orf229H3BNL8 230 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 RAD17O75943 681 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 GMPSP49915 693 aaPredicted RBP18.12■□□□□ 0.49
TPM1-202ENST00000288398 SF3B3Q15393 1217 aaKnown RBP18.12■□□□□ 0.49
TPM1-202ENST00000288398 WASHC4Q2M389 1173 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 CDHR2Q9BYE9 1310 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 PCNTO95613 3336 aa18.12■□□□□ 0.49
TPM1-202ENST00000288398 RASSF10A6NK89 507 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 G3V3G9 751 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 TRIM28Q13263 835 aaKnown RBP18.11■□□□□ 0.49
TPM1-202ENST00000288398 DCAF8Q5TAQ9 597 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 EYA3Q99504 573 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 MYD88Q99836 296 aa18.11■□□□□ 0.49
TPM1-202ENST00000288398 H7C1D1 291 aa18.1■□□□□ 0.49
TPM1-202ENST00000288398 ECE1P42892 770 aa18.1■□□□□ 0.49
TPM1-202ENST00000288398 CTCFP49711 727 aaPredicted RBP18.1■□□□□ 0.49
TPM1-202ENST00000288398 ZBTB38Q8NAP3 1195 aaPredicted RBP18.1■□□□□ 0.49
TPM1-202ENST00000288398 MAP2K1Q02750 393 aaPredicted RBP18.09■□□□□ 0.49
TPM1-202ENST00000288398 GRM1Q13255 1194 aa18.09■□□□□ 0.49
TPM1-202ENST00000288398 CELF1Q92879 486 aaKnown RBP18.09■□□□□ 0.49
TPM1-202ENST00000288398 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
TPM1-202ENST00000288398 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
TPM1-202ENST00000288398 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
TPM1-202ENST00000288398 LTBP1Q14766 1721 aa18.09■□□□□ 0.49
TPM1-202ENST00000288398 WDR33Q9C0J8 1336 aaKnown RBP18.08■□□□□ 0.49
TPM1-202ENST00000288398 RIMBP2O15034 1052 aa18.08■□□□□ 0.48
TPM1-202ENST00000288398 FOXN1O15353 648 aa18.08■□□□□ 0.48
TPM1-202ENST00000288398 RPS8P62241 208 aaKnown RBP18.08■□□□□ 0.48
TPM1-202ENST00000288398 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
TPM1-202ENST00000288398 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
TPM1-202ENST00000288398 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.48
TPM1-202ENST00000288398 DDX60Q8IY21 1712 aaKnown RBP18.07■□□□□ 0.48
TPM1-202ENST00000288398 ANKIB1Q9P2G1 1089 aa18.07■□□□□ 0.48
TPM1-202ENST00000288398 TRAF5O00463 557 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 GPSM2P81274 684 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 NEXNQ0ZGT2 675 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 C8orf58Q8NAV2 365 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 ZC3H15Q8WU90 426 aaKnown RBP18.06■□□□□ 0.48
TPM1-202ENST00000288398 ZC3H12CQ9C0D7 883 aaKnown RBP18.06■□□□□ 0.48
TPM1-202ENST00000288398 DBNDD1Q9H9R9 158 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 PRDM10Q9NQV6 1147 aa18.06■□□□□ 0.48
TPM1-202ENST00000288398 CNOT7Q9UIV1 285 aaKnown RBP18.06■□□□□ 0.48
TPM1-202ENST00000288398 PDE8AO60658 829 aa18.05■□□□□ 0.48
TPM1-202ENST00000288398 CELF2O95319 508 aaKnown RBP18.05■□□□□ 0.48
TPM1-202ENST00000288398 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
TPM1-202ENST00000288398 MICALL2Q8IY33 904 aa18.05■□□□□ 0.48
TPM1-202ENST00000288398 CAPNS2Q96L46 248 aa18.05■□□□□ 0.48
TPM1-202ENST00000288398 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
TPM1-202ENST00000288398 ZNF408Q9H9D4 720 aa18.05■□□□□ 0.48
TPM1-202ENST00000288398 LRRC37AA6NMS7 1700 aa18.04■□□□□ 0.48
TPM1-202ENST00000288398 ECE2O60344 883 aa18.04■□□□□ 0.48
TPM1-202ENST00000288398 CDC37L1Q7L3B6 337 aa18.04■□□□□ 0.48
TPM1-202ENST00000288398 GLIS2Q9BZE0 524 aaPredicted RBP18.04■□□□□ 0.48
TPM1-202ENST00000288398 WBP1LQ9NX94 342 aa18.04■□□□□ 0.48
TPM1-202ENST00000288398 MAP3K2Q9Y2U5 619 aa18.04■□□□□ 0.48
TPM1-202ENST00000288398 YDJCA8MPS7 323 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 PSMD14O00487 310 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 UFL1O94874 794 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 RPS12P25398 132 aaKnown RBP18.03■□□□□ 0.48
TPM1-202ENST00000288398 FMR1Q06787 632 aaKnown RBP eCLIP18.03■□□□□ 0.48
TPM1-202ENST00000288398 DOK7Q18PE1 504 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 TBC1D16Q8TBP0 767 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 DPF2Q92785 391 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 POLLQ9UGP5 575 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 GGA1Q9UJY5 639 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 TLL2Q9Y6L7 1015 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 DUOX1Q9NRD9 1551 aa18.03■□□□□ 0.48
TPM1-202ENST00000288398 TAF1P21675 1872 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms