RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 PRPF40BQ6NWY9 871 aaKnown RBP22■■□□□ 1.11
ATG3-201ENST00000283290 ARHGAP27Q6ZUM4 889 aa22■■□□□ 1.11
ATG3-201ENST00000283290 EPHA10Q5JZY3 1008 aa21.99■■□□□ 1.11
ATG3-201ENST00000283290 OLFM4Q6UX06 510 aa21.99■■□□□ 1.11
ATG3-201ENST00000283290 RPGRQ92834 1020 aaKnown RBP21.99■■□□□ 1.11
ATG3-201ENST00000283290 SUCLG2Q96I99 432 aa21.99■■□□□ 1.11
ATG3-201ENST00000283290 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
ATG3-201ENST00000283290 CDHR2Q9BYE9 1310 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 SBF1O95248 1867 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 FER1L6Q2WGJ9 1857 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 C21orf2O43822 256 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 CCT4P50991 539 aaKnown RBP21.98■■□□□ 1.11
ATG3-201ENST00000283290 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
ATG3-201ENST00000283290 DZIP1LQ8IYY4 767 aaKnown RBP21.98■■□□□ 1.11
ATG3-201ENST00000283290 MEIS3Q99687 375 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 SEC31BQ9NQW1 1179 aa21.98■■□□□ 1.11
ATG3-201ENST00000283290 PDE8AO60658 829 aa21.97■■□□□ 1.11
ATG3-201ENST00000283290 CCDC88AQ3V6T2 1871 aa21.97■■□□□ 1.11
ATG3-201ENST00000283290 YY1P25490 414 aa21.96■■□□□ 1.11
ATG3-201ENST00000283290 HOXA10P31260 410 aaPredicted RBP21.96■■□□□ 1.11
ATG3-201ENST00000283290 CTSWP56202 376 aa21.96■■□□□ 1.11
ATG3-201ENST00000283290 INTS3Q68E01 1043 aaKnown RBP21.96■■□□□ 1.11
ATG3-201ENST00000283290 KAZALD1Q96I82 304 aa21.96■■□□□ 1.11
ATG3-201ENST00000283290 ALDH1B1P30837 517 aa21.95■■□□□ 1.11
ATG3-201ENST00000283290 FOXO4P98177 505 aa21.95■■□□□ 1.11
ATG3-201ENST00000283290 ITPRIPQ8IWB1 547 aa21.95■■□□□ 1.11
ATG3-201ENST00000283290 RBM17Q96I25 401 aaKnown RBP21.95■■□□□ 1.11
ATG3-201ENST00000283290 GREM2Q9H772 168 aa21.95■■□□□ 1.1
ATG3-201ENST00000283290 RASSF7Q02833 373 aa21.94■■□□□ 1.1
ATG3-201ENST00000283290 TTLL11Q8NHH1 800 aa21.94■■□□□ 1.1
ATG3-201ENST00000283290 C7orf43Q8WVR3 580 aa21.94■■□□□ 1.1
ATG3-201ENST00000283290 CELF1Q92879 486 aaKnown RBP21.94■■□□□ 1.1
ATG3-201ENST00000283290 CHMP3Q9Y3E7 222 aa21.94■■□□□ 1.1
ATG3-201ENST00000283290 SF3B3Q15393 1217 aaKnown RBP21.93■■□□□ 1.1
ATG3-201ENST00000283290 FAM161AQ3B820 660 aa21.93■■□□□ 1.1
ATG3-201ENST00000283290 CRAMP1Q96RY5 1269 aa21.93■■□□□ 1.1
ATG3-201ENST00000283290 COG6Q9Y2V7 657 aa21.93■■□□□ 1.1
ATG3-201ENST00000283290 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
ATG3-201ENST00000283290 UTYO14607 1347 aa21.92■■□□□ 1.1
ATG3-201ENST00000283290 NFKBIEO00221 500 aa21.91■■□□□ 1.1
ATG3-201ENST00000283290 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
ATG3-201ENST00000283290 DDX46Q7L014 1031 aaKnown RBP21.91■■□□□ 1.1
ATG3-201ENST00000283290 PLA2G12BQ9BX93 195 aa21.91■■□□□ 1.1
ATG3-201ENST00000283290 C1orf115Q9H7X2 142 aa21.91■■□□□ 1.1
ATG3-201ENST00000283290 LRRFIP2Q9Y608 721 aaKnown RBP21.91■■□□□ 1.1
ATG3-201ENST00000283290 PPEF1O14829 653 aaPredicted RBP21.9■■□□□ 1.1
ATG3-201ENST00000283290 UBTFL1P0CB47 393 aaPredicted RBP21.9■■□□□ 1.1
ATG3-201ENST00000283290 PRELPP51888 382 aa21.9■■□□□ 1.1
ATG3-201ENST00000283290 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
ATG3-201ENST00000283290 CCDC152Q4G0S7 254 aa21.9■■□□□ 1.1
ATG3-201ENST00000283290 ANKRD44Q8N8A2 993 aa21.89■■□□□ 1.09
ATG3-201ENST00000283290 HSP90B1P14625 803 aaKnown RBP21.88■■□□□ 1.09
ATG3-201ENST00000283290 GRAPQ13588 217 aa21.88■■□□□ 1.09
ATG3-201ENST00000283290 CCDC93Q567U6 631 aa21.88■■□□□ 1.09
ATG3-201ENST00000283290 SOGA3Q5TF21 947 aa21.88■■□□□ 1.09
ATG3-201ENST00000283290 GRAPLQ8TC17 118 aaPredicted RBP21.88■■□□□ 1.09
ATG3-201ENST00000283290 ZNF594Q96JF6 807 aaPredicted RBP21.88■■□□□ 1.09
ATG3-201ENST00000283290 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
ATG3-201ENST00000283290 TIAM2Q8IVF5 1701 aa21.88■■□□□ 1.09
ATG3-201ENST00000283290 SNED1Q8TER0 1413 aa21.87■■□□□ 1.09
ATG3-201ENST00000283290 CSF1RP07333 972 aa21.87■■□□□ 1.09
ATG3-201ENST00000283290 ITGA6P23229 1130 aa21.87■■□□□ 1.09
ATG3-201ENST00000283290 DICER1Q9UPY3 1922 aaKnown RBP21.87■■□□□ 1.09
ATG3-201ENST00000283290 C9orf131Q5VYM1 1079 aa21.87■■□□□ 1.09
ATG3-201ENST00000283290 LRRC37AA6NMS7 1700 aa21.86■■□□□ 1.09
ATG3-201ENST00000283290 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.86■■□□□ 1.09
ATG3-201ENST00000283290 KLHDC4Q8TBB5 520 aa21.86■■□□□ 1.09
ATG3-201ENST00000283290 TAOK3Q9H2K8 898 aa21.86■■□□□ 1.09
ATG3-201ENST00000283290 RNF181Q9P0P0 153 aa21.86■■□□□ 1.09
ATG3-201ENST00000283290 MVPQ14764 893 aaKnown RBP21.85■■□□□ 1.09
ATG3-201ENST00000283290 LTBP3Q9NS15 1303 aa21.84■■□□□ 1.09
ATG3-201ENST00000283290 ZBTB7BO15156 539 aaPredicted RBP21.84■■□□□ 1.09
ATG3-201ENST00000283290 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
ATG3-201ENST00000283290 ATP6V0A2Q9Y487 856 aa21.84■■□□□ 1.09
ATG3-201ENST00000283290 BBOX1O75936 387 aa21.83■■□□□ 1.09
ATG3-201ENST00000283290 LMNB1P20700 586 aa21.83■■□□□ 1.09
ATG3-201ENST00000283290 GNAI3P08754 354 aa21.82■■□□□ 1.08
ATG3-201ENST00000283290 IRX6P78412 446 aaPredicted RBP21.82■■□□□ 1.08
ATG3-201ENST00000283290 IFIT5Q13325 482 aaKnown RBP21.82■■□□□ 1.08
ATG3-201ENST00000283290 ANKRD18AQ8IVF6 992 aa21.82■■□□□ 1.08
ATG3-201ENST00000283290 RTKN2Q8IZC4 609 aa21.82■■□□□ 1.08
ATG3-201ENST00000283290 A0A1B0GUL6 1792 aa21.82■■□□□ 1.08
ATG3-201ENST00000283290 ANKRD18BA2A2Z9 1011 aa21.82■■□□□ 1.08
ATG3-201ENST00000283290 WTIPA6NIX2 430 aaPredicted RBP21.82■■□□□ 1.08
ATG3-201ENST00000283290 FKBP4Q02790 459 aaKnown RBP eCLIP21.82■■□□□ 1.08
ATG3-201ENST00000283290 RABL6Q3YEC7 729 aaPredicted RBP21.82■■□□□ 1.08
ATG3-201ENST00000283290 CC2D2BQ6DHV5 1058 aa21.81■■□□□ 1.08
ATG3-201ENST00000283290 SP8Q8IXZ3 490 aa21.81■■□□□ 1.08
ATG3-201ENST00000283290 ZNF784Q8NCA9 323 aaPredicted RBP21.81■■□□□ 1.08
ATG3-201ENST00000283290 RTL9Q8NET4 1388 aa21.81■■□□□ 1.08
ATG3-201ENST00000283290 GNAI2P04899 355 aa21.8■■□□□ 1.08
ATG3-201ENST00000283290 MS4A1P11836 297 aa21.8■■□□□ 1.08
ATG3-201ENST00000283290 PDE3AQ14432 1141 aa21.8■■□□□ 1.08
ATG3-201ENST00000283290 CCDC57Q2TAC2 916 aa21.8■■□□□ 1.08
ATG3-201ENST00000283290 GPR101Q96P66 508 aaPredicted RBP21.8■■□□□ 1.08
ATG3-201ENST00000283290 CDC5LQ99459 802 aaKnown RBP21.8■■□□□ 1.08
ATG3-201ENST00000283290 PUS3Q9BZE2 481 aaKnown RBP21.8■■□□□ 1.08
ATG3-201ENST00000283290 ZNF277Q9NRM2 450 aaPredicted RBP21.8■■□□□ 1.08
ATG3-201ENST00000283290 GPSM2P81274 684 aa21.79■■□□□ 1.08
ATG3-201ENST00000283290 TAF7LQ5H9L4 462 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms