RNA–Protein interactions for RNA: ENST00000274170.8

CDH18-201, Transcript of cadherin 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH18, Length 2,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-201ENST00000274170 XAGE3Q8WTP9 111 aa9.5□□□□□ -0.89
CDH18-201ENST00000274170 UPF2Q9HAU5 1272 aaKnown RBP9.5□□□□□ -0.89
CDH18-201ENST00000274170 UBN2Q6ZU65 1347 aa9.5□□□□□ -0.89
CDH18-201ENST00000274170 E9PSI1 815 aa9.5□□□□□ -0.89
CDH18-201ENST00000274170 HSP90B1P14625 803 aaKnown RBP9.5□□□□□ -0.89
CDH18-201ENST00000274170 ANKRD13DQ6ZTN6 518 aa9.5□□□□□ -0.89
CDH18-201ENST00000274170 C2CD5Q86YS7 1000 aa9.5□□□□□ -0.89
CDH18-201ENST00000274170 SPINK5Q9NQ38 1064 aaPredicted RBP9.5□□□□□ -0.89
CDH18-201ENST00000274170 WDR90Q96KV7 1748 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 A0A0G2JLW4 131 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 VAMP4O75379 141 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 DDX58O95786 925 aaKnown RBP9.49□□□□□ -0.89
CDH18-201ENST00000274170 MYL6BP14649 208 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 EIF2S2P20042 333 aaKnown RBP9.49□□□□□ -0.89
CDH18-201ENST00000274170 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
CDH18-201ENST00000274170 UTP14CQ5TAP6 766 aaKnown RBP9.49□□□□□ -0.89
CDH18-201ENST00000274170 TTLL6Q8N841 843 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 CRAMP1Q96RY5 1269 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 KRT24Q2M2I5 525 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 TAF7LQ5H9L4 462 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 CC2D2BQ6DHV5 1058 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 NLRP10Q86W26 655 aa9.49□□□□□ -0.89
CDH18-201ENST00000274170 UTP14AQ9BVJ6 771 aaKnown RBP9.49□□□□□ -0.89
CDH18-201ENST00000274170 A0A1B0GUL6 1792 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 BRPF1P55201 1214 aaPredicted RBP9.48□□□□□ -0.89
CDH18-201ENST00000274170 TMC4Q7Z404 712 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 PIP4K2AP48426 406 aaPredicted RBP9.48□□□□□ -0.89
CDH18-201ENST00000274170 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 C7orf43Q8WVR3 580 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 VPS33BQ9H267 617 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 PSME4Q14997 1843 aa9.48□□□□□ -0.89
CDH18-201ENST00000274170 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 KSR2Q6VAB6 950 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 CCDC191Q8NCU4 936 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 METTL22Q9BUU2 404 aaPredicted RBP9.47□□□□□ -0.89
CDH18-201ENST00000274170 STK31Q9BXU1 1019 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 RTL9Q8NET4 1388 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 ABCC12Q96J65 1359 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 ZNF500O60304 480 aaPredicted RBP9.47□□□□□ -0.89
CDH18-201ENST00000274170 MTERF4Q7Z6M4 381 aaKnown RBP9.47□□□□□ -0.89
CDH18-201ENST00000274170 TSPYL6Q8N831 410 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 SCN4AP35499 1836 aa9.47□□□□□ -0.89
CDH18-201ENST00000274170 DMTNQ08495 405 aa9.46□□□□□ -0.89
CDH18-201ENST00000274170 SPRYD3Q8NCJ5 442 aa9.46□□□□□ -0.89
CDH18-201ENST00000274170 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.89
CDH18-201ENST00000274170 CIZ1Q9ULV3 898 aaPredicted RBP9.46□□□□□ -0.89
CDH18-201ENST00000274170 ZNF330Q9Y3S2 320 aaPredicted RBP9.46□□□□□ -0.89
CDH18-201ENST00000274170 YY1P25490 414 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 SF3B3Q15393 1217 aaKnown RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 SKOR2Q2VWA4 1001 aaPredicted RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 ALDH1L2Q3SY69 923 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 BICDL1Q6ZP65 573 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 SMC5Q8IY18 1101 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 TNPO1Q92973 898 aaKnown RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 TSR2Q969E8 191 aaKnown RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 CHRNA5P30532 468 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
CDH18-201ENST00000274170 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
CDH18-201ENST00000274170 SH3TC1Q8TE82 1336 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 PCCAP05165 728 aaPredicted RBP9.45□□□□□ -0.9
CDH18-201ENST00000274170 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
CDH18-201ENST00000274170 RAB3GAP1Q15042 981 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
CDH18-201ENST00000274170 ZBTB38Q8NAP3 1195 aaPredicted RBP9.45□□□□□ -0.9
CDH18-201ENST00000274170 C22orf23Q9BZE7 217 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 PTMSP20962 102 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 SNX21Q969T3 373 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 PLA2G12BQ9BX93 195 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 FAM13BQ9NYF5 915 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 PCDHB15Q9Y5E8 787 aa9.45□□□□□ -0.9
CDH18-201ENST00000274170 PANK1Q8TE04 598 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 PSMD1Q99460 953 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 PTPRCP08575 1304 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 ZSCAN20P17040 1043 aaPredicted RBP9.44□□□□□ -0.9
CDH18-201ENST00000274170 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
CDH18-201ENST00000274170 CLEC17AQ6ZS10 378 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 PDLIM2Q96JY6 352 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
CDH18-201ENST00000274170 NOL7Q9UMY1 257 aaKnown RBP9.44□□□□□ -0.9
CDH18-201ENST00000274170 BBOX1O75936 387 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 RIC3Q7Z5B4 369 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 PHAXQ9H814 394 aaKnown RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 COG6Q9Y2V7 657 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 SPEF2Q9C093 1822 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 UQCRHLA0A096LP55 91 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 ANXA1P04083 346 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 UQCRHP07919 91 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 CCDC93Q567U6 631 aa9.43□□□□□ -0.9
CDH18-201ENST00000274170 PRPF40BQ6NWY9 871 aaKnown RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 RTFDC1Q9BY42 306 aaPredicted RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 CWC25Q9NXE8 425 aaPredicted RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 R3HCC1Q9Y3T6 440 aaKnown RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 ZNF646O15015 1829 aaPredicted RBP9.43□□□□□ -0.9
CDH18-201ENST00000274170 H7C1W4 665 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms