RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 NYAP1Q6ZVC0 841 aa15.01□□□□□ -0.01
HERC6-202ENST00000273960 SDF4Q9BRK5 362 aa15.01□□□□□ -0.01
HERC6-202ENST00000273960 EDC4Q6P2E9 1401 aaKnown RBP15.01□□□□□ -0.01
HERC6-202ENST00000273960 DDX19AQ9NUU7 478 aaKnown RBP15.01□□□□□ -0.01
HERC6-202ENST00000273960 IFNKQ9P0W0 207 aa15.01□□□□□ -0.01
HERC6-202ENST00000273960 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.01□□□□□ -0.01
HERC6-202ENST00000273960 ZC3H13Q5T200 1668 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 ANXA1P04083 346 aa15□□□□□ -0.01
HERC6-202ENST00000273960 CCT4P50991 539 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 ZC3H6P61129 1189 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 MTHFSDQ2M296 383 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 CCAR1Q8IX12 1150 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 NFATC2IPQ8NCF5 419 aa15□□□□□ -0.01
HERC6-202ENST00000273960 ARGLU1Q9NWB6 273 aaPredicted RBP15□□□□□ -0.01
HERC6-202ENST00000273960 ARHGEF28Q8N1W1 1705 aaKnown RBP15□□□□□ -0.01
HERC6-202ENST00000273960 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
HERC6-202ENST00000273960 TPM4P67936 248 aa15□□□□□ -0.01
HERC6-202ENST00000273960 E2F4Q16254 413 aa15□□□□□ -0.01
HERC6-202ENST00000273960 PPP1R13BQ96KQ4 1090 aa15□□□□□ -0.01
HERC6-202ENST00000273960 FAM227BQ96M60 508 aa15□□□□□ -0.01
HERC6-202ENST00000273960 ATP8B2P98198 1209 aa15□□□□□ -0.01
HERC6-202ENST00000273960 MCM6Q14566 821 aa15□□□□□ -0.01
HERC6-202ENST00000273960 EYA1Q99502 592 aa15□□□□□ -0.01
HERC6-202ENST00000273960 FLIIQ13045 1269 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 E4F1Q66K89 784 aaPredicted RBP14.99□□□□□ -0.01
HERC6-202ENST00000273960 PROSER2Q86WR7 435 aaPredicted RBP14.99□□□□□ -0.01
HERC6-202ENST00000273960 RHPN1Q8TCX5 695 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 SCAND2PQ9GZW5 306 aaPredicted RBP14.99□□□□□ -0.01
HERC6-202ENST00000273960 IFT172Q9UG01 1749 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 ME1P48163 572 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 BRF1Q92994 677 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 PHF8Q9UPP1 1060 aa14.99□□□□□ -0.01
HERC6-202ENST00000273960 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
HERC6-202ENST00000273960 CSB-PGBD3P0DP91 1061 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 SFPQP23246 707 aaKnown RBP eCLIP14.98□□□□□ -0.01
HERC6-202ENST00000273960 LMOD1P29536 600 aaPredicted RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 EVCP57679 992 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 SECISBP2LQ93073 1101 aaKnown RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 COL3A1P02461 1466 aaPredicted RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 GPS2Q13227 327 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 SMC1AQ14683 1233 aaKnown RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 A0A0G2JS52 829 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 KINO60870 393 aaKnown RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 SASH3O75995 380 aa14.98□□□□□ -0.01
HERC6-202ENST00000273960 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.98□□□□□ -0.01
HERC6-202ENST00000273960 DHX16O60231 1041 aaKnown RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 GNAI3P08754 354 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 FOXR1Q6PIV2 292 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 ORAI2Q96SN7 254 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 XPO4Q9C0E2 1151 aaKnown RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 PA2G4Q9UQ80 394 aaKnown RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 PTPRCP08575 1304 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 H2AFXP16104 143 aaPredicted RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 IQCB1Q15051 598 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 CCDC73Q6ZRK6 1079 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 SOS1Q07889 1333 aaPredicted RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 TXLNBQ8N3L3 684 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 DDX17Q92841 729 aaKnown RBP14.97□□□□□ -0.01
HERC6-202ENST00000273960 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
HERC6-202ENST00000273960 SALL3Q9BXA9 1300 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 CHL1O00533 1208 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 WWC2Q6AWC2 1192 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 BLOC1S2Q6QNY1 142 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 STK11IPQ8N1F8 1099 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 RGS22Q8NE09 1264 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 UTP14AQ9BVJ6 771 aaKnown RBP14.96□□□□□ -0.01
HERC6-202ENST00000273960 PHAXQ9H814 394 aaKnown RBP14.96□□□□□ -0.01
HERC6-202ENST00000273960 VPS18Q9P253 973 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 NDUFB9Q9Y6M9 179 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 PDILTQ8N807 584 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 RABEP2Q9H5N1 569 aa14.96□□□□□ -0.01
HERC6-202ENST00000273960 A0A1B0GVL5 298 aa14.96□□□□□ -0.02
HERC6-202ENST00000273960 STX1AQ16623 288 aa14.96□□□□□ -0.02
HERC6-202ENST00000273960 TTLL5Q6EMB2 1281 aa14.96□□□□□ -0.02
HERC6-202ENST00000273960 FSIP1Q8NA03 581 aa14.96□□□□□ -0.02
HERC6-202ENST00000273960 PI4K2BQ8TCG2 481 aa14.96□□□□□ -0.02
HERC6-202ENST00000273960 CREB3L3Q68CJ9 461 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 GOLPH3LQ9H4A5 285 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 ORC3Q9UBD5 711 aaPredicted RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 CPS1P31327 1500 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 CCT2P78371 535 aaKnown RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 VPS53Q5VIR6 699 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 ZSCAN31Q96LW9 406 aaPredicted RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 TSPYL1Q9H0U9 437 aa14.95□□□□□ -0.02
HERC6-202ENST00000273960 SH2B1Q9NRF2 756 aaPredicted RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 RRP15Q9Y3B9 282 aaKnown RBP14.95□□□□□ -0.02
HERC6-202ENST00000273960 ARMCX5Q6P1M9 558 aa14.94□□□□□ -0.02
HERC6-202ENST00000273960 EDC3Q96F86 508 aaKnown RBP14.94□□□□□ -0.02
HERC6-202ENST00000273960 NBPF7P0C2Y1 421 aaPredicted RBP14.94□□□□□ -0.02
HERC6-202ENST00000273960 PDCP20941 246 aa14.94□□□□□ -0.02
HERC6-202ENST00000273960 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
HERC6-202ENST00000273960 TEFQ10587 303 aa14.94□□□□□ -0.02
HERC6-202ENST00000273960 CEP57L1Q8IYX8 460 aa14.94□□□□□ -0.02
HERC6-202ENST00000273960 USP44Q9H0E7 712 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms