RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 ATP2B3Q16720 1220 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
CNOT9-201ENST00000273064 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
CNOT9-201ENST00000273064 DNAJC10Q8IXB1 793 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
CNOT9-201ENST00000273064 A2ML1A8K2U0 1454 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 A0A1B0GUL7 405 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 SLC27A2O14975 620 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 MIGA1Q8NAN2 632 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 TMX1Q9H3N1 280 aa17.1■□□□□ 0.33
CNOT9-201ENST00000273064 AATKQ6ZMQ8 1374 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
CNOT9-201ENST00000273064 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 METTL22Q9BUU2 404 aaPredicted RBP17.09■□□□□ 0.33
CNOT9-201ENST00000273064 BTG4Q9NY30 223 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 TNNI3KQ59H18 835 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 LUZP1Q86V48 1076 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 ZKSCAN3Q9BRR0 538 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 FPGT-TNNI3KV9GXZ4 949 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 TTC41PQ6P2S7 1318 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 RAD50Q92878 1312 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
CNOT9-201ENST00000273064 GPT2Q8TD30 523 aa17.09■□□□□ 0.33
CNOT9-201ENST00000273064 ME3Q16798 604 aa17.08■□□□□ 0.33
CNOT9-201ENST00000273064 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.33
CNOT9-201ENST00000273064 SIRT1Q96EB6 747 aa17.08■□□□□ 0.33
CNOT9-201ENST00000273064 NEURL1BA8MQ27 555 aa17.08■□□□□ 0.32
CNOT9-201ENST00000273064 HSPA4P34932 840 aa17.08■□□□□ 0.32
CNOT9-201ENST00000273064 IL2RBP14784 551 aa17.08■□□□□ 0.32
CNOT9-201ENST00000273064 CLCN1P35523 988 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 CDC37L1Q7L3B6 337 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
CNOT9-201ENST00000273064 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 ARHGEF10O15013 1369 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 DHX8Q14562 1220 aaKnown RBP17.07■□□□□ 0.32
CNOT9-201ENST00000273064 CEP57L1Q8IYX8 460 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 PRDM10Q9NQV6 1147 aa17.07■□□□□ 0.32
CNOT9-201ENST00000273064 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 ARHGEF25Q86VW2 580 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 TAF5LO75529 589 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 KIF2CQ99661 725 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-201ENST00000273064 CHGBP05060 677 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 IL15P40933 162 aaPredicted RBP17.06■□□□□ 0.32
CNOT9-201ENST00000273064 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 SLC26A6Q9BXS9 759 aa17.06■□□□□ 0.32
CNOT9-201ENST00000273064 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
CNOT9-201ENST00000273064 A0A087WWV3 80 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 LARGE1O95461 756 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 TMEM67Q5HYA8 995 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 AMOTL1Q8IY63 956 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 MYL10Q9BUA6 226 aa17.05■□□□□ 0.32
CNOT9-201ENST00000273064 GOLGA8AA7E2F4 631 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 TPM3P06753 285 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 MAP3K12Q12852 859 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 ZSCAN25Q6NSZ9 544 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 TSC1Q92574 1164 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 INTS4Q96HW7 963 aaKnown RBP17.04■□□□□ 0.32
CNOT9-201ENST00000273064 NGLY1Q96IV0 654 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 KCNQ4P56696 695 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 ZNF589Q86UQ0 364 aaPredicted RBP17.04■□□□□ 0.32
CNOT9-201ENST00000273064 TPCN1Q9ULQ1 816 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 LRRC7Q96NW7 1537 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 BRD1O95696 1058 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 PHKG2P15735 406 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 GNL3LQ9NVN8 582 aaKnown RBP17.04■□□□□ 0.32
CNOT9-201ENST00000273064 ATP7BP35670 1465 aa17.04■□□□□ 0.32
CNOT9-201ENST00000273064 IRS4O14654 1257 aaPredicted RBP17.03■□□□□ 0.32
CNOT9-201ENST00000273064 PRC1O43663 620 aa17.03■□□□□ 0.32
CNOT9-201ENST00000273064 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
CNOT9-201ENST00000273064 EPHA10Q5JZY3 1008 aa17.03■□□□□ 0.32
CNOT9-201ENST00000273064 PI16Q6UXB8 463 aa17.03■□□□□ 0.32
CNOT9-201ENST00000273064 CPLX3Q8WVH0 158 aa17.03■□□□□ 0.32
CNOT9-201ENST00000273064 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
CNOT9-201ENST00000273064 ADGRB3O60242 1522 aa17.02■□□□□ 0.32
CNOT9-201ENST00000273064 A0A1B0GVL5 298 aa17.02■□□□□ 0.32
CNOT9-201ENST00000273064 XBP1P17861 261 aa17.02■□□□□ 0.32
CNOT9-201ENST00000273064 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
CNOT9-201ENST00000273064 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
CNOT9-201ENST00000273064 QRICH2Q9H0J4 1663 aa17.02■□□□□ 0.32
CNOT9-201ENST00000273064 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
CNOT9-201ENST00000273064 HOOK1Q9UJC3 728 aaKnown RBP17.02■□□□□ 0.32
CNOT9-201ENST00000273064 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.32
CNOT9-201ENST00000273064 TPM2P07951 284 aa17.02■□□□□ 0.31
CNOT9-201ENST00000273064 IARSP41252 1262 aaKnown RBP17.02■□□□□ 0.31
CNOT9-201ENST00000273064 METAP2P50579 478 aaKnown RBP eCLIP17.02■□□□□ 0.31
CNOT9-201ENST00000273064 MNS1Q8NEH6 495 aa17.02■□□□□ 0.31
CNOT9-201ENST00000273064 HMGN5P82970 282 aaKnown RBP17.01■□□□□ 0.31
CNOT9-201ENST00000273064 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 EYA2O00167 538 aa17.01■□□□□ 0.31
CNOT9-201ENST00000273064 SASH1O94885 1247 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms