RNA–Protein interactions for RNA: ENST00000267935.12

COMMD4-201, Transcript of COMM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD4, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-201ENST00000267935 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
COMMD4-201ENST00000267935 ANKRD13DQ6ZTN6 518 aa18.51■□□□□ 0.55
COMMD4-201ENST00000267935 PLBD2Q8NHP8 589 aa18.51■□□□□ 0.55
COMMD4-201ENST00000267935 ZC3H15Q8WU90 426 aaKnown RBP18.51■□□□□ 0.55
COMMD4-201ENST00000267935 CAPNS2Q96L46 248 aa18.51■□□□□ 0.55
COMMD4-201ENST00000267935 DBF4Q9UBU7 674 aaPredicted RBP18.51■□□□□ 0.55
COMMD4-201ENST00000267935 H7C1D1 291 aa18.5■□□□□ 0.55
COMMD4-201ENST00000267935 HOXB7P09629 217 aa18.5■□□□□ 0.55
COMMD4-201ENST00000267935 HSP90B1P14625 803 aaKnown RBP18.5■□□□□ 0.55
COMMD4-201ENST00000267935 GMPSP49915 693 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-201ENST00000267935 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
COMMD4-201ENST00000267935 GPR101Q96P66 508 aaPredicted RBP18.5■□□□□ 0.55
COMMD4-201ENST00000267935 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
COMMD4-201ENST00000267935 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
COMMD4-201ENST00000267935 GRM1Q13255 1194 aa18.49■□□□□ 0.55
COMMD4-201ENST00000267935 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
COMMD4-201ENST00000267935 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
COMMD4-201ENST00000267935 ADAMTSL1Q8N6G6 1762 aa18.49■□□□□ 0.55
COMMD4-201ENST00000267935 RAD17O75943 681 aa18.48■□□□□ 0.55
COMMD4-201ENST00000267935 MAP2K2P36507 400 aa18.48■□□□□ 0.55
COMMD4-201ENST00000267935 DDX10Q13206 875 aaKnown RBP18.48■□□□□ 0.55
COMMD4-201ENST00000267935 CST9Q5W186 159 aa18.48■□□□□ 0.55
COMMD4-201ENST00000267935 CHPF2Q9P2E5 772 aa18.48■□□□□ 0.55
COMMD4-201ENST00000267935 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
COMMD4-201ENST00000267935 TRAF5O00463 557 aa18.47■□□□□ 0.55
COMMD4-201ENST00000267935 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
COMMD4-201ENST00000267935 HSPA8P11142 646 aaKnown RBP18.47■□□□□ 0.55
COMMD4-201ENST00000267935 WASHC4Q2M389 1173 aa18.47■□□□□ 0.55
COMMD4-201ENST00000267935 CDC37L1Q7L3B6 337 aa18.47■□□□□ 0.55
COMMD4-201ENST00000267935 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
COMMD4-201ENST00000267935 PGAP2Q9UHJ9 254 aa18.47■□□□□ 0.55
COMMD4-201ENST00000267935 CNOT7Q9UIV1 285 aaKnown RBP18.47■□□□□ 0.55
COMMD4-201ENST00000267935 NSFL1CQ9UNZ2 370 aaKnown RBP18.47■□□□□ 0.55
COMMD4-201ENST00000267935 SF3B3Q15393 1217 aaKnown RBP18.46■□□□□ 0.55
COMMD4-201ENST00000267935 CYP4F22Q6NT55 531 aa18.46■□□□□ 0.55
COMMD4-201ENST00000267935 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
COMMD4-201ENST00000267935 COL4A5P29400 1685 aa18.46■□□□□ 0.55
COMMD4-201ENST00000267935 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
COMMD4-201ENST00000267935 FMR1Q06787 632 aaKnown RBP eCLIP18.45■□□□□ 0.54
COMMD4-201ENST00000267935 FAM89AQ96GI7 184 aa18.45■□□□□ 0.54
COMMD4-201ENST00000267935 HHIPL1Q96JK4 782 aa18.45■□□□□ 0.54
COMMD4-201ENST00000267935 EYA3Q99504 573 aa18.45■□□□□ 0.54
COMMD4-201ENST00000267935 TRIM35Q9UPQ4 493 aa18.45■□□□□ 0.54
COMMD4-201ENST00000267935 CA12O43570 354 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 CALD1Q05682 793 aaKnown RBP18.44■□□□□ 0.54
COMMD4-201ENST00000267935 TRIM28Q13263 835 aaKnown RBP18.44■□□□□ 0.54
COMMD4-201ENST00000267935 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 SLC51AQ86UW1 340 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 DPF2Q92785 391 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 ISCA1Q9BUE6 129 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
COMMD4-201ENST00000267935 ATP5J2-PTCD1G3V325 749 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 G3V3G9 751 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 DCAF8Q5TAQ9 597 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 DUSP27Q5VZP5 1158 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 RIC3Q7Z5B4 369 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 SAPCD2Q86UD0 394 aa18.43■□□□□ 0.54
COMMD4-201ENST00000267935 GLIS2Q9BZE0 524 aaPredicted RBP18.43■□□□□ 0.54
COMMD4-201ENST00000267935 RPS8P62241 208 aaKnown RBP18.42■□□□□ 0.54
COMMD4-201ENST00000267935 GOLGA2Q08379 1002 aa18.42■□□□□ 0.54
COMMD4-201ENST00000267935 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
COMMD4-201ENST00000267935 ZNF408Q9H9D4 720 aa18.42■□□□□ 0.54
COMMD4-201ENST00000267935 LTBP1Q14766 1721 aa18.41■□□□□ 0.54
COMMD4-201ENST00000267935 IRS4O14654 1257 aaPredicted RBP18.41■□□□□ 0.54
COMMD4-201ENST00000267935 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
COMMD4-201ENST00000267935 RPS12P25398 132 aaKnown RBP18.41■□□□□ 0.54
COMMD4-201ENST00000267935 MICALL2Q8IY33 904 aa18.41■□□□□ 0.54
COMMD4-201ENST00000267935 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
COMMD4-201ENST00000267935 TRPM7Q96QT4 1865 aa18.4■□□□□ 0.54
COMMD4-201ENST00000267935 HIRAP54198 1017 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-201ENST00000267935 RTL5Q5HYW3 569 aaPredicted RBP18.4■□□□□ 0.54
COMMD4-201ENST00000267935 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
COMMD4-201ENST00000267935 ZNF428Q96B54 188 aa18.4■□□□□ 0.54
COMMD4-201ENST00000267935 ABHD8Q96I13 439 aa18.4■□□□□ 0.54
COMMD4-201ENST00000267935 YDJCA8MPS7 323 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 PSMD14O00487 310 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 GNAI1P63096 354 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 ZBTB38Q8NAP3 1195 aaPredicted RBP18.39■□□□□ 0.53
COMMD4-201ENST00000267935 TRPM4Q8TD43 1214 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 DCPSQ96C86 337 aaKnown RBP18.39■□□□□ 0.53
COMMD4-201ENST00000267935 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
COMMD4-201ENST00000267935 AOC2O75106 756 aa18.38■□□□□ 0.53
COMMD4-201ENST00000267935 GPSM2P81274 684 aa18.38■□□□□ 0.53
COMMD4-201ENST00000267935 MBIPQ9NS73 344 aa18.38■□□□□ 0.53
COMMD4-201ENST00000267935 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
COMMD4-201ENST00000267935 POLLQ9UGP5 575 aa18.38■□□□□ 0.53
COMMD4-201ENST00000267935 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
COMMD4-201ENST00000267935 ECE2O60344 883 aa18.37■□□□□ 0.53
COMMD4-201ENST00000267935 DDX58O95786 925 aaKnown RBP18.37■□□□□ 0.53
COMMD4-201ENST00000267935 BRPF1P55201 1214 aaPredicted RBP18.37■□□□□ 0.53
COMMD4-201ENST00000267935 NOGQ13253 232 aa18.37■□□□□ 0.53
COMMD4-201ENST00000267935 KRT26Q7Z3Y9 468 aa18.37■□□□□ 0.53
COMMD4-201ENST00000267935 C2orf69Q8N8R5 385 aa18.37■□□□□ 0.53
COMMD4-201ENST00000267935 IFT57Q9NWB7 429 aa18.37■□□□□ 0.53
COMMD4-201ENST00000267935 HUNKP57058 714 aa18.36■□□□□ 0.53
COMMD4-201ENST00000267935 DOK7Q18PE1 504 aa18.36■□□□□ 0.53
COMMD4-201ENST00000267935 CCDC152Q4G0S7 254 aa18.36■□□□□ 0.53
COMMD4-201ENST00000267935 RBM26Q5T8P6 1007 aaKnown RBP18.36■□□□□ 0.53
COMMD4-201ENST00000267935 SAMD7Q7Z3H4 446 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms