RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 ZNF569Q5MCW4 686 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 FBXO38Q6PIJ6 1188 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 HDXQ7Z353 690 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 TICAM2Q86XR7 235 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 CEP112Q8N8E3 955 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 CTTNBP2Q8WZ74 1663 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 CHST3Q7LGC8 479 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 RABEP2Q9H5N1 569 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 TBC1D2BQ9UPU7 963 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
CASC3-201ENST00000264645 PSME1Q06323 249 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 ME3Q16798 604 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 KIF21AQ7Z4S6 1674 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 XPO4Q9C0E2 1151 aaKnown RBP17.34■□□□□ 0.37
CASC3-201ENST00000264645 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 WDHD1O75717 1129 aaPredicted RBP17.34■□□□□ 0.37
CASC3-201ENST00000264645 CCDC144CPQ8IYA2 1237 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 BAG1Q99933 345 aaPredicted RBP17.34■□□□□ 0.37
CASC3-201ENST00000264645 JADE2Q9NQC1 790 aa17.34■□□□□ 0.37
CASC3-201ENST00000264645 STIM1Q13586 685 aa17.33■□□□□ 0.37
CASC3-201ENST00000264645 CTAGE9A4FU28 777 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 GOLIM4O00461 696 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 FOXO3O43524 673 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
CASC3-201ENST00000264645 PTPDC1A2A3K4 754 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 ATP2C2O75185 946 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 TAX1BP1Q86VP1 789 aa17.33■□□□□ 0.36
CASC3-201ENST00000264645 JAK2O60674 1132 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 APOBRQ0VD83 1088 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 MICALCLQ6ZW33 695 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 CCDC85AQ96PX6 553 aaPredicted RBP17.32■□□□□ 0.36
CASC3-201ENST00000264645 N4BP3O15049 544 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 YEATS4O95619 227 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 ETF1P62495 437 aaKnown RBP17.32■□□□□ 0.36
CASC3-201ENST00000264645 FANCCQ00597 558 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 CEP126Q9P2H0 1117 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 WDR7Q9Y4E6 1490 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 A0A087WWV3 80 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 EPS15P42566 896 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 RASEFQ8IZ41 740 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 NLRP2Q9NX02 1062 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 MAP3K2Q9Y2U5 619 aa17.32■□□□□ 0.36
CASC3-201ENST00000264645 SEC31AO94979 1220 aaKnown RBP17.31■□□□□ 0.36
CASC3-201ENST00000264645 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 SPA17Q15506 151 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 CCDC91Q7Z6B0 441 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 CEP57Q86XR8 500 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 BCCIPQ9P287 314 aaKnown RBP eCLIP17.31■□□□□ 0.36
CASC3-201ENST00000264645 PTPRTO14522 1441 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 WDR62O43379 1518 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 IFIT1P09914 478 aaKnown RBP17.31■□□□□ 0.36
CASC3-201ENST00000264645 PAFAH1B1P43034 410 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 SLC26A8Q96RN1 970 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 TANGO6Q9C0B7 1094 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
CASC3-201ENST00000264645 KLF18A0A0U1RQI7 1052 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 MYL5Q02045 173 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 MICU3Q86XE3 530 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 SPTLC3Q9NUV7 552 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 ADGRL2O95490 1459 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
CASC3-201ENST00000264645 FAM227BQ96M60 508 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 GOLGA6L7A0A1B0GV03 622 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 ZEB2O60315 1214 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 ARID5BQ14865 1188 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 OTUD6BQ8N6M0 293 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 ATRIPQ8WXE1 791 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 PPM1EQ8WY54 764 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.3■□□□□ 0.364e-7■■□□□ 13.3
CASC3-201ENST00000264645 IMPACTQ9P2X3 320 aa17.3■□□□□ 0.36
CASC3-201ENST00000264645 RAPGEF3O95398 923 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 NF2P35240 595 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 MRFAP1L1Q96HT8 127 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 CAPZA3Q96KX2 299 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 DBF4Q9UBU7 674 aaPredicted RBP17.29■□□□□ 0.36
CASC3-201ENST00000264645 RGS12O14924 1447 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 MBD5Q9P267 1494 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 IDH1O75874 414 aaKnown RBP17.29■□□□□ 0.36
CASC3-201ENST00000264645 ZNF710Q8N1W2 664 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 SNRKQ9NRH2 765 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 RAPGEF6Q8TEU7 1601 aa17.29■□□□□ 0.36
CASC3-201ENST00000264645 STX17P56962 302 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 EIF4A2Q14240 407 aaKnown RBP17.28■□□□□ 0.36
CASC3-201ENST00000264645 SYCP1Q15431 976 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
CASC3-201ENST00000264645 SLC27A2O14975 620 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 IRX5P78411 483 aaPredicted RBP17.28■□□□□ 0.36
CASC3-201ENST00000264645 ATP10BO94823 1461 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 ZNF213O14771 459 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 RPS6KB1P23443 525 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 CLCN6P51797 869 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 KMT5BQ4FZB7 885 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 MPHOSPH8Q99549 860 aa17.28■□□□□ 0.36
CASC3-201ENST00000264645 MYD88Q99836 296 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms