RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PIP4K2BP78356 416 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 A0A1W2PRG0 241 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 ZWINTO95229 277 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 ZSCAN22P10073 491 aaPredicted RBP19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 ZC3H6P61129 1189 aaKnown RBP19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 CYLC1P35663 651 aaPredicted RBP19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 ABCC5O15440 1437 aa19.96■□□□□ 0.79
NOTCH3-201ENST00000263388 HSPA4P34932 840 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 F6X3S4 739 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 NBPF7P0C2Y1 421 aaPredicted RBP19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 NUCB1Q02818 461 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 TMTC2Q8N394 836 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 TFIP11Q9UBB9 837 aaKnown RBP19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 RBM25P49756 843 aaKnown RBP19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 N4BP3O15049 544 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 STAT6P42226 847 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 TRIM47Q96LD4 638 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 TEX13AQ9BXU3 409 aaPredicted RBP19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 GDPD2Q9HCC8 539 aa19.95■□□□□ 0.78
NOTCH3-201ENST00000263388 TMX1Q9H3N1 280 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 CCDC174Q6PII3 467 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 IPO4Q8TEX9 1081 aaKnown RBP19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 SRRTQ9BXP5 876 aaKnown RBP19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 KRT23Q9C075 422 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 ORC3Q9UBD5 711 aaPredicted RBP19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 MNAT1P51948 309 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 PPP1R14CQ8TAE6 165 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 ERMNQ8TAM6 284 aa19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 HDAC1Q13547 482 aaPredicted RBP19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 MPHOSPH6Q99547 160 aaKnown RBP19.94■□□□□ 0.78
NOTCH3-201ENST00000263388 TSPY2A6NKD2 308 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 CCDC144CPQ8IYA2 1237 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 SEPT6Q14141 434 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 CNNM2Q9H8M5 875 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 DRC1Q96MC2 740 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 SLC26A6Q9BXS9 759 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 COMMD10Q9Y6G5 202 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 LRRC45Q96CN5 670 aa19.93■□□□□ 0.78
NOTCH3-201ENST00000263388 PRC1O43663 620 aa19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 HCLS1P14317 486 aaPredicted RBP19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 HLA-DOAP06340 250 aa19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 ANO6Q4KMQ2 910 aa19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 DDX46Q7L014 1031 aaKnown RBP19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 PABPN1LA6NDY0 278 aaKnown RBP19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 ZFYP08048 801 aaPredicted RBP19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 MPRIPQ6WCQ1 1025 aa19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
NOTCH3-201ENST00000263388 TBCAO75347 108 aaKnown RBP19.91■□□□□ 0.78
NOTCH3-201ENST00000263388 IDEP14735 1019 aa19.91■□□□□ 0.78
NOTCH3-201ENST00000263388 SAMM50Q9Y512 469 aa19.91■□□□□ 0.78
NOTCH3-201ENST00000263388 ANKRD36BQ8N2N9 1353 aa19.91■□□□□ 0.78
NOTCH3-201ENST00000263388 MYO1BO43795 1136 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 RAPGEF3O95398 923 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 LDHCP07864 332 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 PPP1R42Q7Z4L9 355 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 KIF4AO95239 1232 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 GSTO1P78417 241 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 SPAG1Q07617 926 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 OPA1O60313 960 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 WTAPQ15007 396 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 ZGPATQ8N5A5 531 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 CRNKL1Q9BZJ0 848 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 AKR1B10O60218 316 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 ISM2Q6H9L7 571 aa19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 IQCGQ9H095 443 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 RBM27Q9P2N5 1060 aaKnown RBP19.9■□□□□ 0.78
NOTCH3-201ENST00000263388 IFIT1BQ5T764 474 aaKnown RBP19.89■□□□□ 0.78
NOTCH3-201ENST00000263388 GIMAP6Q6P9H5 292 aa19.89■□□□□ 0.78
NOTCH3-201ENST00000263388 FAM200AQ8TCP9 573 aa19.89■□□□□ 0.78
NOTCH3-201ENST00000263388 UBE3BQ7Z3V4 1068 aa19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 SPDYE4A6NLX3 237 aa19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 TRAF1Q13077 416 aa19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 GTF2A1P52655 376 aaPredicted RBP19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 SYNCQ9H7C4 482 aa19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 PUF60Q9UHX1 559 aaKnown RBP19.89■□□□□ 0.77
NOTCH3-201ENST00000263388 ZBTB43O43298 467 aa19.88■□□□□ 0.77
NOTCH3-201ENST00000263388 SKILP12757 684 aa19.88■□□□□ 0.77
NOTCH3-201ENST00000263388 LDHAL6AQ6ZMR3 332 aa19.88■□□□□ 0.77
NOTCH3-201ENST00000263388 WASLO00401 505 aaPredicted RBP19.88■□□□□ 0.77
NOTCH3-201ENST00000263388 TMX3Q96JJ7 454 aa19.88■□□□□ 0.77
NOTCH3-201ENST00000263388 ARHGAP45Q92619 1136 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 GOLGA1Q92805 767 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 LARP6Q9BRS8 491 aaKnown RBP19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 DUOX2Q9NRD8 1548 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 CTAGE15A4D2H0 777 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 PSMA7O14818 248 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 CTAGE8P0CG41 777 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 MSL1Q68DK7 614 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 CTAGE6Q86UF2 777 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 CTAGE4Q8IX94 777 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 GTPBP4Q9BZE4 634 aaKnown RBP19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 SSX2IPQ9Y2D8 614 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 TTC14Q96N46 770 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 NAP1L3Q99457 506 aaPredicted RBP19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 FBF1Q8TES7 1133 aa19.87■□□□□ 0.77
NOTCH3-201ENST00000263388 IBSPP21815 317 aaPredicted RBP19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 BICD1Q96G01 975 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 KRT86O43790 486 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 RTN1Q16799 776 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms