RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 U3KPZ7 1027 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 IGHMBP2P38935 993 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 NFE2L2Q16236 605 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 AFAP1Q8N556 730 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 CARD6Q9BX69 1037 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 RFC1P35251 1148 aaPredicted RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 PPP2R5AQ15172 486 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 CCDC50Q8IVM0 306 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 KIF1BPQ96EK5 621 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 NOL3O60936 208 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 TRIM21P19474 475 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 PPP1R14CQ8TAE6 165 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 ZNF287Q9HBT7 754 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 GUCA1BQ9UMX6 200 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
CALCOCO1-201ENST00000262059 TLDC2A0PJX2 215 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 AKR1B10O60218 316 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 CEP120Q8N960 986 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 PHAXQ9H814 394 aaKnown RBP12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 AKAP2Q9Y2D5 859 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 RPGRIP1LQ68CZ1 1315 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 GOLGA6CA6NDK9 693 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 GOLGA6DP0CG33 693 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 CCDC82Q8N4S0 544 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 SNX21Q969T3 373 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 SMC6Q96SB8 1091 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 GOLGA6AQ9NYA3 693 aa12.27□□□□□ -0.44
CALCOCO1-201ENST00000262059 BRD2P25440 801 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 IFNKQ9P0W0 207 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 HMGXB3Q12766 1538 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 GLRX3O76003 335 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 SEC24BO95487 1268 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 ARFGAP2Q8N6H7 521 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 ZC3H6P61129 1189 aaKnown RBP12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 SF3A3Q12874 501 aaKnown RBP eCLIP12.27□□□□□ -0.457e-7■■■□□ 15.1
CALCOCO1-201ENST00000262059 CFAP58Q5T655 872 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 ZSCAN29Q8IWY8 852 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 DNAI2Q9GZS0 605 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 BAIAP2L1Q9UHR4 511 aa12.27□□□□□ -0.45
CALCOCO1-201ENST00000262059 IDH1O75874 414 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 FAM184BQ9ULE4 1060 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 AQRO60306 1485 aaKnown RBP eCLIP12.26□□□□□ -0.451e-6■■■■■ 33.7
CALCOCO1-201ENST00000262059 GNAT3A8MTJ3 354 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 TSHZ3Q63HK5 1081 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 STMN2Q93045 179 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.26□□□□□ -0.455e-6■■■□□ 17
CALCOCO1-201ENST00000262059 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 LIG3P49916 1009 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 ZGPATQ8N5A5 531 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 ZNF622Q969S3 477 aaKnown RBP eCLIP12.26□□□□□ -0.454e-7■■■□□ 18.3
CALCOCO1-201ENST00000262059 NGLY1Q96IV0 654 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 PRDM11Q9NQV5 511 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 SLC52A1Q9NWF4 448 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 CWC25Q9NXE8 425 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 SEC63Q9UGP8 760 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 TPX2Q9ULW0 747 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 CYLC1P35663 651 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 TNIP1Q15025 636 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 SETDB1Q15047 1291 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 WHAMMP3Q1A5X7 153 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 SEC62Q99442 399 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 MKRN1Q9UHC7 482 aaKnown RBP12.26□□□□□ -0.45
CALCOCO1-201ENST00000262059 HMGB1P09429 215 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 GBP1P32455 592 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 ARHGAP25P42331 645 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 USP5P45974 858 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 DZIP1Q86YF9 867 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 KCNK9Q9NPC2 374 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 CCDC196A0A1B0GTZ2 297 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 FGFR1OPO95684 399 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 F13A1P00488 732 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 CEP128Q6ZU80 1094 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 CACNA2D3Q8IZS8 1091 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 TTC14Q96N46 770 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 BOLA2Q9H3K6 86 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 CCDC172P0C7W6 258 aa12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 DDX23Q9BUQ8 820 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 SPATS2LQ9NUQ6 558 aaKnown RBP12.25□□□□□ -0.45
CALCOCO1-201ENST00000262059 SYKP43405 635 aa12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 POLA1P09884 1462 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 TACC1O75410 805 aa12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 ZNF853P0CG23 659 aa12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 DUSP27Q5VZP5 1158 aa12.24□□□□□ -0.45
CALCOCO1-201ENST00000262059 SPTY2D1Q68D10 685 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms