RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PALD1Q9ULE6 856 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 USP16Q9Y5T5 823 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 SGSM2O43147 1006 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 HCLS1P14317 486 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 JARID2Q92833 1246 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
CHRNA1-201ENST00000261007 AFDNP55196 1824 aaKnown RBP12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 HSPA4P34932 840 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 EVA1CP58658 441 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 UNC5CLQ8IV45 518 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 RAD50Q92878 1312 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 GDPD2Q9HCC8 539 aa12.84□□□□□ -0.35
CHRNA1-201ENST00000261007 TNS2Q63HR2 1409 aa12.83□□□□□ -0.35
CHRNA1-201ENST00000261007 RIOK3O14730 519 aaKnown RBP12.83□□□□□ -0.35
CHRNA1-201ENST00000261007 COPRSQ9NQ92 184 aa12.83□□□□□ -0.35
CHRNA1-201ENST00000261007 OGFRQ9NZT2 677 aa12.83□□□□□ -0.35
CHRNA1-201ENST00000261007 RABL6Q3YEC7 729 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-201ENST00000261007 AACSQ86V21 672 aa12.83□□□□□ -0.36
CHRNA1-201ENST00000261007 C17orf53Q8N3J3 647 aaPredicted RBP12.83□□□□□ -0.36
CHRNA1-201ENST00000261007 KCPQ6ZWJ8 1503 aa12.82□□□□□ -0.36
CHRNA1-201ENST00000261007 SHANK3Q9BYB0 1731 aa12.82□□□□□ -0.36
CHRNA1-201ENST00000261007 KCNF1Q9H3M0 494 aa12.82□□□□□ -0.36
CHRNA1-201ENST00000261007 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
CHRNA1-201ENST00000261007 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.82□□□□□ -0.36
CHRNA1-201ENST00000261007 TEX13AQ9BXU3 409 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 PA2G4Q9UQ80 394 aaKnown RBP12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 STX6O43752 255 aa12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 F13A1P00488 732 aa12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 GABPB1Q06547 395 aaPredicted RBP12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 MPNDQ8N594 471 aa12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 PYCARDQ9ULZ3 195 aa12.81□□□□□ -0.36
CHRNA1-201ENST00000261007 RFX7Q2KHR2 1363 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 NUP188Q5SRE5 1749 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 TCHHQ07283 1943 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 SASH1O94885 1247 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 PDIA4P13667 645 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 TICAM2Q86XR7 235 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 COL14A1Q05707 1796 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 A0A087WZG4 1122 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 CCDC192P0DO97 292 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 NOL8Q76FK4 1167 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 TTC14Q96N46 770 aa12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 UPF3BQ9BZI7 483 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 LSG1Q9H089 658 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-201ENST00000261007 SMTNL1A8MU46 457 aa12.79□□□□□ -0.36
CHRNA1-201ENST00000261007 SNRKQ9NRH2 765 aa12.79□□□□□ -0.36
CHRNA1-201ENST00000261007 CWC25Q9NXE8 425 aaPredicted RBP12.79□□□□□ -0.36
CHRNA1-201ENST00000261007 LIMCH1Q9UPQ0 1083 aa12.79□□□□□ -0.36
CHRNA1-201ENST00000261007 H7C1W4 665 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 AP5Z1O43299 807 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 SYT1P21579 422 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 FOXD4L6Q3SYB3 417 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 FOXD4L3Q6VB84 417 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 UBE3BQ7Z3V4 1068 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 STRN4Q9NRL3 753 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 CGNQ9P2M7 1197 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 PAXBP1Q9Y5B6 917 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 LRP6O75581 1613 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 MAP4K4O95819 1239 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 RFX5P48382 616 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 CASP7P55210 303 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 GIMAP6Q6P9H5 292 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 CWC27Q6UX04 472 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
CHRNA1-201ENST00000261007 COL22A1Q8NFW1 1626 aaPredicted RBP12.77□□□□□ -0.36
CHRNA1-201ENST00000261007 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
CHRNA1-201ENST00000261007 AHDC1Q5TGY3 1603 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 NBPF10Q6P3W6 841 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 NBPF15Q8N660 670 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 FAM200AQ8TCP9 573 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 KCNB2Q92953 911 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 TM6SF1Q9BZW5 370 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 ATG3Q9NT62 314 aa12.77□□□□□ -0.37
CHRNA1-201ENST00000261007 NPM3O75607 178 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 ATP5JP18859 108 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 PTPN12Q05209 780 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 NCBP1Q09161 790 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 EPHA10Q5JZY3 1008 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 GPR108Q9NPR9 543 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 CTNNA3Q9UI47 895 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 ZKSCAN1P17029 563 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 TNNI3KQ59H18 835 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 ZSCAN31Q96LW9 406 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 SNX14Q9Y5W7 946 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 MORC2Q9Y6X9 1032 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 FPGT-TNNI3KV9GXZ4 949 aa12.76□□□□□ -0.37
CHRNA1-201ENST00000261007 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms