RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 C10orf71Q711Q0 1435 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 POLRMTO00411 1230 aaKnown RBP19.43■□□□□ 0.7
GYPC-201ENST00000259254 GRIN3BO60391 1043 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 PDE8AO60658 829 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 FOXO4P98177 505 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 HDAC1Q13547 482 aaPredicted RBP19.43■□□□□ 0.7
GYPC-201ENST00000259254 SIRT2Q8IXJ6 389 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 CCDC24Q8N4L8 307 aa19.43■□□□□ 0.7
GYPC-201ENST00000259254 PNMA6EA0A0J9YXQ4 647 aa19.42■□□□□ 0.7
GYPC-201ENST00000259254 IGHDP01880 384 aa19.42■□□□□ 0.7
GYPC-201ENST00000259254 ST5P78524 1137 aa19.42■□□□□ 0.7
GYPC-201ENST00000259254 CCDC85AQ96PX6 553 aaPredicted RBP19.42■□□□□ 0.7
GYPC-201ENST00000259254 PLA2G12BQ9BX93 195 aa19.42■□□□□ 0.7
GYPC-201ENST00000259254 GOLGB1Q14789 3259 aaKnown RBP19.42■□□□□ 0.7
GYPC-201ENST00000259254 BRCA1P38398 1863 aaKnown RBP19.41■□□□□ 0.7
GYPC-201ENST00000259254 CTSWP56202 376 aa19.41■□□□□ 0.7
GYPC-201ENST00000259254 MTX1Q13505 466 aa19.41■□□□□ 0.7
GYPC-201ENST00000259254 RABL6Q3YEC7 729 aaPredicted RBP19.41■□□□□ 0.7
GYPC-201ENST00000259254 PRR5LQ6MZQ0 368 aa19.41■□□□□ 0.7
GYPC-201ENST00000259254 ABCC12Q96J65 1359 aa19.41■□□□□ 0.7
GYPC-201ENST00000259254 CENPQQ7L2Z9 268 aaPredicted RBP19.4■□□□□ 0.7
GYPC-201ENST00000259254 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
GYPC-201ENST00000259254 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
GYPC-201ENST00000259254 SSH3Q8TE77 659 aa19.39■□□□□ 0.69
GYPC-201ENST00000259254 POLA2Q14181 598 aa19.38■□□□□ 0.69
GYPC-201ENST00000259254 FAM161AQ3B820 660 aa19.38■□□□□ 0.69
GYPC-201ENST00000259254 TTLL11Q8NHH1 800 aa19.38■□□□□ 0.69
GYPC-201ENST00000259254 NLRP3Q96P20 1036 aa19.38■□□□□ 0.69
GYPC-201ENST00000259254 NRXN2Q9P2S2 1712 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 CSF1RP07333 972 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 TGFB2P61812 414 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 CCDC57Q2TAC2 916 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 CCDC152Q4G0S7 254 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
GYPC-201ENST00000259254 SURF6O75683 361 aaKnown RBP19.36■□□□□ 0.69
GYPC-201ENST00000259254 IFIT5Q13325 482 aaKnown RBP19.36■□□□□ 0.69
GYPC-201ENST00000259254 OS9Q13438 667 aaPredicted RBP19.36■□□□□ 0.69
GYPC-201ENST00000259254 GREM2Q9H772 168 aa19.36■□□□□ 0.69
GYPC-201ENST00000259254 KDM2BQ8NHM5 1336 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 ANKRD18BA2A2Z9 1011 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 APBB1O00213 710 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 C3orf67Q6ZVT6 689 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 PA2G4Q9UQ80 394 aaKnown RBP19.35■□□□□ 0.69
GYPC-201ENST00000259254 EXOC6BQ9Y2D4 811 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 ARFGEF1Q9Y6D6 1849 aa19.35■□□□□ 0.69
GYPC-201ENST00000259254 ITGA6P23229 1130 aa19.34■□□□□ 0.69
GYPC-201ENST00000259254 KLHDC4Q8TBB5 520 aa19.34■□□□□ 0.69
GYPC-201ENST00000259254 SIL1Q9H173 461 aa19.34■□□□□ 0.69
GYPC-201ENST00000259254 DCTPP1Q9H773 170 aa19.34■□□□□ 0.69
GYPC-201ENST00000259254 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
GYPC-201ENST00000259254 RFX5P48382 616 aaPredicted RBP19.33■□□□□ 0.68
GYPC-201ENST00000259254 SF3B3Q15393 1217 aaKnown RBP19.33■□□□□ 0.68
GYPC-201ENST00000259254 A0A0G2JLW4 131 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 G3BP1Q13283 466 aaKnown RBP eCLIP19.32■□□□□ 0.68
GYPC-201ENST00000259254 HSP90AB4PQ58FF6 505 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 SMC5Q8IY18 1101 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 ZNF594Q96JF6 807 aaPredicted RBP19.32■□□□□ 0.68
GYPC-201ENST00000259254 BRIP1Q9BX63 1249 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 BCL11AQ9H165 835 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 RIC1Q4ADV7 1423 aa19.32■□□□□ 0.68
GYPC-201ENST00000259254 DPEP1P16444 411 aa19.31■□□□□ 0.68
GYPC-201ENST00000259254 PTPN12Q05209 780 aaKnown RBP19.31■□□□□ 0.68
GYPC-201ENST00000259254 RPGRQ92834 1020 aaKnown RBP19.31■□□□□ 0.68
GYPC-201ENST00000259254 COPRSQ9NQ92 184 aa19.31■□□□□ 0.68
GYPC-201ENST00000259254 SEC31BQ9NQW1 1179 aa19.31■□□□□ 0.68
GYPC-201ENST00000259254 DLEC1Q9Y238 1755 aa19.31■□□□□ 0.68
GYPC-201ENST00000259254 PDE6BP35913 854 aa19.3■□□□□ 0.68
GYPC-201ENST00000259254 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
GYPC-201ENST00000259254 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
GYPC-201ENST00000259254 CDC5LQ99459 802 aaKnown RBP19.3■□□□□ 0.68
GYPC-201ENST00000259254 RTL9Q8NET4 1388 aa19.3■□□□□ 0.68
GYPC-201ENST00000259254 RAB11FIP3O75154 756 aa19.29■□□□□ 0.68
GYPC-201ENST00000259254 IGHMBP2P38935 993 aaKnown RBP19.29■□□□□ 0.68
GYPC-201ENST00000259254 ERC1Q8IUD2 1116 aa19.29■□□□□ 0.68
GYPC-201ENST00000259254 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
GYPC-201ENST00000259254 EYA2O00167 538 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 LDHAL6AQ6ZMR3 332 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 ANKRD18AQ8IVF6 992 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 RBM17Q96I25 401 aaKnown RBP19.28■□□□□ 0.68
GYPC-201ENST00000259254 MPHOSPH8Q99549 860 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 LRRCC1Q9C099 1032 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 CNNM1Q9NRU3 951 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 PDZRN3Q9UPQ7 1066 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
GYPC-201ENST00000259254 DDX60Q8IY21 1712 aaKnown RBP19.28■□□□□ 0.68
GYPC-201ENST00000259254 LAMB2P55268 1798 aa19.27■□□□□ 0.68
GYPC-201ENST00000259254 KCNA3P22001 575 aa19.27■□□□□ 0.68
GYPC-201ENST00000259254 ANKRD31Q8N7Z5 1873 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
GYPC-201ENST00000259254 IL15P40933 162 aaPredicted RBP19.26■□□□□ 0.67
GYPC-201ENST00000259254 NUCB1Q02818 461 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 CRY2Q49AN0 593 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 RHPN1Q8TCX5 695 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 KIF1BPQ96EK5 621 aa19.26■□□□□ 0.67
GYPC-201ENST00000259254 PUS3Q9BZE2 481 aaKnown RBP19.26■□□□□ 0.67
GYPC-201ENST00000259254 TNRC6CQ9HCJ0 1690 aaKnown RBP19.26■□□□□ 0.67
GYPC-201ENST00000259254 CIAO1O76071 339 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms