RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 SETDB2Q96T68 719 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.98■■□□□ 1.11
CCDC115-201ENST00000259229 NRXN2Q9P2S2 1712 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 ERFEQ4G0M1 354 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 HSP90AB4PQ58FF6 505 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 CHMP3Q9Y3E7 222 aa21.98■■□□□ 1.11
CCDC115-201ENST00000259229 SASH1O94885 1247 aa21.97■■□□□ 1.11
CCDC115-201ENST00000259229 SF3B2Q13435 895 aaKnown RBP21.97■■□□□ 1.11
CCDC115-201ENST00000259229 KIF1BPQ96EK5 621 aa21.97■■□□□ 1.11
CCDC115-201ENST00000259229 GREM2Q9H772 168 aa21.97■■□□□ 1.11
CCDC115-201ENST00000259229 PLEKHM2Q8IWE5 1019 aa21.96■■□□□ 1.11
CCDC115-201ENST00000259229 CCDC85AQ96PX6 553 aaPredicted RBP21.96■■□□□ 1.11
CCDC115-201ENST00000259229 SIL1Q9H173 461 aa21.96■■□□□ 1.11
CCDC115-201ENST00000259229 SPEF2Q9C093 1822 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 TM4SF1P30408 202 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 IL1RAPL2Q9NP60 686 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 SLC15A2Q16348 729 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 SLC10A5Q5PT55 438 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 C3orf67Q6ZVT6 689 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 ZNF594Q96JF6 807 aaPredicted RBP21.95■■□□□ 1.1
CCDC115-201ENST00000259229 NYXQ9GZU5 481 aa21.95■■□□□ 1.1
CCDC115-201ENST00000259229 ATG9AQ7Z3C6 839 aa21.94■■□□□ 1.1
CCDC115-201ENST00000259229 NBPF5PQ86XG9 351 aaPredicted RBP21.94■■□□□ 1.1
CCDC115-201ENST00000259229 ERC1Q8IUD2 1116 aa21.94■■□□□ 1.1
CCDC115-201ENST00000259229 FLAD1Q8NFF5 587 aa21.94■■□□□ 1.1
CCDC115-201ENST00000259229 RIC1Q4ADV7 1423 aa21.93■■□□□ 1.1
CCDC115-201ENST00000259229 ITGA6P23229 1130 aa21.93■■□□□ 1.1
CCDC115-201ENST00000259229 DDR1Q08345 913 aa21.93■■□□□ 1.1
CCDC115-201ENST00000259229 G3BP1Q13283 466 aaKnown RBP eCLIP21.92■■□□□ 1.1
CCDC115-201ENST00000259229 OS9Q13438 667 aaPredicted RBP21.92■■□□□ 1.1
CCDC115-201ENST00000259229 CCDC57Q2TAC2 916 aa21.92■■□□□ 1.1
CCDC115-201ENST00000259229 CCDC125Q86Z20 511 aa21.92■■□□□ 1.1
CCDC115-201ENST00000259229 A0A1B0GUL6 1792 aa21.92■■□□□ 1.1
CCDC115-201ENST00000259229 TAF1P21675 1872 aa21.92■■□□□ 1.1
CCDC115-201ENST00000259229 IFIT5Q13325 482 aaKnown RBP21.91■■□□□ 1.1
CCDC115-201ENST00000259229 ZBTB47Q9UFB7 747 aaPredicted RBP21.91■■□□□ 1.1
CCDC115-201ENST00000259229 CIAO1O76071 339 aa21.91■■□□□ 1.1
CCDC115-201ENST00000259229 LRRC24Q50LG9 513 aa21.91■■□□□ 1.1
CCDC115-201ENST00000259229 PUS3Q9BZE2 481 aaKnown RBP21.91■■□□□ 1.1
CCDC115-201ENST00000259229 ANKRD31Q8N7Z5 1873 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 EYA2O00167 538 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 POLRMTO00411 1230 aaKnown RBP21.9■■□□□ 1.1
CCDC115-201ENST00000259229 HSP90B1P14625 803 aaKnown RBP21.9■■□□□ 1.1
CCDC115-201ENST00000259229 SF3B3Q15393 1217 aaKnown RBP21.9■■□□□ 1.1
CCDC115-201ENST00000259229 TPTE2Q6XPS3 522 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 BCL11AQ9H165 835 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 OSBPL3Q9H4L5 887 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 STK32BQ9NY57 414 aa21.9■■□□□ 1.1
CCDC115-201ENST00000259229 PRR5LQ6MZQ0 368 aa21.89■■□□□ 1.09
CCDC115-201ENST00000259229 CCDC24Q8N4L8 307 aa21.89■■□□□ 1.09
CCDC115-201ENST00000259229 FBXO3Q9UK99 471 aa21.89■■□□□ 1.09
CCDC115-201ENST00000259229 ANKRD18BA2A2Z9 1011 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 GSPT1P15170 499 aaKnown RBP21.88■■□□□ 1.09
CCDC115-201ENST00000259229 PDE1AP54750 535 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 CCDC152Q4G0S7 254 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 IL15P40933 162 aaPredicted RBP21.88■■□□□ 1.09
CCDC115-201ENST00000259229 TFCP2Q12800 502 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 C8orf34Q49A92 452 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 CNBD1Q8NA66 436 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 UPF1Q92900 1129 aaKnown RBP eCLIP21.88■■□□□ 1.094e-11■■■■■ 29.7
CCDC115-201ENST00000259229 EAF2Q96CJ1 260 aaPredicted RBP21.88■■□□□ 1.09
CCDC115-201ENST00000259229 SEC31BQ9NQW1 1179 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 STAP2Q9UGK3 403 aa21.88■■□□□ 1.09
CCDC115-201ENST00000259229 ZNF609O15014 1411 aa21.87■■□□□ 1.09
CCDC115-201ENST00000259229 SERPINB2P05120 415 aa21.87■■□□□ 1.09
CCDC115-201ENST00000259229 MX1P20591 662 aa21.87■■□□□ 1.09
CCDC115-201ENST00000259229 GTF2E1P29083 439 aaPredicted RBP21.87■■□□□ 1.09
CCDC115-201ENST00000259229 MSH5O43196 834 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 BMP2KLQ5H9B9 411 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 TTC22Q5TAA0 569 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 TSHZ3Q63HK5 1081 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 CLASRPQ8N2M8 674 aaKnown RBP21.86■■□□□ 1.09
CCDC115-201ENST00000259229 NLGN1Q8N2Q7 840 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 RIPOR2Q9Y4F9 1068 aa21.86■■□□□ 1.09
CCDC115-201ENST00000259229 ARAP2Q8WZ64 1704 aa21.85■■□□□ 1.09
CCDC115-201ENST00000259229 TAF7LQ5H9L4 462 aa21.84■■□□□ 1.09
CCDC115-201ENST00000259229 TLR7Q9NYK1 1049 aaKnown RBP21.84■■□□□ 1.09
CCDC115-201ENST00000259229 AOX1Q06278 1338 aa21.84■■□□□ 1.09
CCDC115-201ENST00000259229 TNNI3KQ59H18 835 aa21.84■■□□□ 1.09
CCDC115-201ENST00000259229 AACSQ86V21 672 aa21.84■■□□□ 1.09
CCDC115-201ENST00000259229 PDGFDQ9GZP0 370 aaPredicted RBP21.84■■□□□ 1.09
CCDC115-201ENST00000259229 FPGT-TNNI3KV9GXZ4 949 aa21.84■■□□□ 1.09
CCDC115-201ENST00000259229 LDHAL6AQ6ZMR3 332 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 PI4K2BQ8TCG2 481 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 NLRP3Q96P20 1036 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 BACH2Q9BYV9 841 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 TSHZ2Q9NRE2 1034 aa21.83■■□□□ 1.08
CCDC115-201ENST00000259229 COL11A2P13942 1736 aaPredicted RBP21.82■■□□□ 1.08
CCDC115-201ENST00000259229 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
CCDC115-201ENST00000259229 GPR108Q9NPR9 543 aa21.82■■□□□ 1.08
CCDC115-201ENST00000259229 MMP10P09238 476 aa21.81■■□□□ 1.08
CCDC115-201ENST00000259229 CCDC8Q9H0W5 538 aaPredicted RBP21.81■■□□□ 1.08
CCDC115-201ENST00000259229 DBNLQ9UJU6 430 aaKnown RBP21.8■■□□□ 1.08
CCDC115-201ENST00000259229 TTC41PQ6P2S7 1318 aa21.8■■□□□ 1.08
CCDC115-201ENST00000259229 IFIT2P09913 472 aaKnown RBP21.8■■□□□ 1.08
CCDC115-201ENST00000259229 ST5P78524 1137 aa21.8■■□□□ 1.08
CCDC115-201ENST00000259229 CRY2Q49AN0 593 aa21.8■■□□□ 1.08
CCDC115-201ENST00000259229 NPHP1O15259 732 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms