RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
CSHL1-201ENST00000259003 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
CSHL1-201ENST00000259003 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
CSHL1-201ENST00000259003 MAPK8IP3Q9UPT6 1336 aa16.68■□□□□ 0.26
CSHL1-201ENST00000259003 ZIC5Q96T25 663 aa16.67■□□□□ 0.26
CSHL1-201ENST00000259003 RTFDC1Q9BY42 306 aaPredicted RBP16.67■□□□□ 0.26
CSHL1-201ENST00000259003 ADARB2Q9NS39 739 aaKnown RBP16.67■□□□□ 0.26
CSHL1-201ENST00000259003 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
CSHL1-201ENST00000259003 CELF2O95319 508 aaKnown RBP16.66■□□□□ 0.26
CSHL1-201ENST00000259003 TMPOP42166 694 aaKnown RBP16.66■□□□□ 0.26
CSHL1-201ENST00000259003 FAM161AQ3B820 660 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 GRIPAP1Q4V328 841 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 CIAPIN1Q6FI81 312 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 DPP8Q6V1X1 898 aaPredicted RBP16.65■□□□□ 0.26
CSHL1-201ENST00000259003 SP8Q8IXZ3 490 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 MPNDQ8N594 471 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
CSHL1-201ENST00000259003 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
CSHL1-201ENST00000259003 EGFRP00533 1210 aa16.64■□□□□ 0.25
CSHL1-201ENST00000259003 KIAA2012Q0VF49 1180 aa16.64■□□□□ 0.25
CSHL1-201ENST00000259003 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
CSHL1-201ENST00000259003 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
CSHL1-201ENST00000259003 SAPCD2Q86UD0 394 aa16.64■□□□□ 0.25
CSHL1-201ENST00000259003 AKAP11Q9UKA4 1901 aa16.63■□□□□ 0.25
CSHL1-201ENST00000259003 ECE1P42892 770 aa16.63■□□□□ 0.25
CSHL1-201ENST00000259003 KCNQ5Q9NR82 932 aa16.63■□□□□ 0.25
CSHL1-201ENST00000259003 CHPF2Q9P2E5 772 aa16.63■□□□□ 0.25
CSHL1-201ENST00000259003 PGAP2Q9UHJ9 254 aa16.63■□□□□ 0.25
CSHL1-201ENST00000259003 TRMT112Q9UI30 125 aaKnown RBP16.63■□□□□ 0.25
CSHL1-201ENST00000259003 BBOX1O75936 387 aa16.62■□□□□ 0.25
CSHL1-201ENST00000259003 GRAPQ13588 217 aa16.62■□□□□ 0.25
CSHL1-201ENST00000259003 RTL5Q5HYW3 569 aaPredicted RBP16.62■□□□□ 0.25
CSHL1-201ENST00000259003 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
CSHL1-201ENST00000259003 CELF1Q92879 486 aaKnown RBP16.62■□□□□ 0.25
CSHL1-201ENST00000259003 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
CSHL1-201ENST00000259003 CNOT7Q9UIV1 285 aaKnown RBP16.62■□□□□ 0.25
CSHL1-201ENST00000259003 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
CSHL1-201ENST00000259003 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
CSHL1-201ENST00000259003 PDE4DIPQ5VU43 2346 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 CCDC85CA6NKD9 419 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 ATP5J2-PTCD1G3V325 749 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 DDX46Q7L014 1031 aaKnown RBP16.61■□□□□ 0.25
CSHL1-201ENST00000259003 SAMD7Q7Z3H4 446 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 USP48Q86UV5 1035 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 SUPT20HQ8NEM7 779 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 VPS33BQ9H267 617 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
CSHL1-201ENST00000259003 PSMD14O00487 310 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 RIMBP2O15034 1052 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 MICALL2Q8IY33 904 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 FAM89AQ96GI7 184 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 TMX4Q9H1E5 349 aaPredicted RBP16.6■□□□□ 0.25
CSHL1-201ENST00000259003 PSME4Q14997 1843 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 SPEF2Q9C093 1822 aa16.6■□□□□ 0.25
CSHL1-201ENST00000259003 TNRC18O15417 2968 aaPredicted RBP16.59■□□□□ 0.25
CSHL1-201ENST00000259003 CHL1O00533 1208 aa16.59■□□□□ 0.25
CSHL1-201ENST00000259003 BEGAINQ9BUH8 593 aa16.59■□□□□ 0.25
CSHL1-201ENST00000259003 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
CSHL1-201ENST00000259003 POLLQ9UGP5 575 aa16.59■□□□□ 0.25
CSHL1-201ENST00000259003 MAP2K2P36507 400 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 GPSM2P81274 684 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 DOK7Q18PE1 504 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 TBC1D10BQ4KMP7 808 aaPredicted RBP16.58■□□□□ 0.24
CSHL1-201ENST00000259003 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 ISCA1Q9BUE6 129 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 RTL9Q8NET4 1388 aa16.58■□□□□ 0.24
CSHL1-201ENST00000259003 ASTN2O75129 1339 aaPredicted RBP16.57■□□□□ 0.24
CSHL1-201ENST00000259003 TNIP1Q15025 636 aa16.57■□□□□ 0.24
CSHL1-201ENST00000259003 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
CSHL1-201ENST00000259003 MCOLN1Q9GZU1 580 aa16.57■□□□□ 0.24
CSHL1-201ENST00000259003 BABAM1Q9NWV8 329 aa16.57■□□□□ 0.24
CSHL1-201ENST00000259003 NSFL1CQ9UNZ2 370 aaKnown RBP16.57■□□□□ 0.24
CSHL1-201ENST00000259003 ADM5C9JUS6 153 aa16.56■□□□□ 0.24
CSHL1-201ENST00000259003 CDC37L1Q7L3B6 337 aa16.56■□□□□ 0.24
CSHL1-201ENST00000259003 JARID2Q92833 1246 aaPredicted RBP16.56■□□□□ 0.24
CSHL1-201ENST00000259003 C6orf229H3BNL8 230 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 H7C1D1 291 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 WASHC4Q2M389 1173 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 HDGFL1Q5TGJ6 251 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 ANKRD13DQ6ZTN6 518 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 PLBD2Q8NHP8 589 aa16.55■□□□□ 0.24
CSHL1-201ENST00000259003 ZC3H15Q8WU90 426 aaKnown RBP16.55■□□□□ 0.24
CSHL1-201ENST00000259003 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
CSHL1-201ENST00000259003 CDHR2Q9BYE9 1310 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 ECE2O60344 883 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 HUNKP57058 714 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 SF3B3Q15393 1217 aaKnown RBP16.54■□□□□ 0.24
CSHL1-201ENST00000259003 HHIPL1Q96JK4 782 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 MYH3P11055 1940 aa16.54■□□□□ 0.24
CSHL1-201ENST00000259003 FAM155AB1AL88 458 aaPredicted RBP16.53■□□□□ 0.24
CSHL1-201ENST00000259003 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
CSHL1-201ENST00000259003 LMOD3Q0VAK6 560 aa16.53■□□□□ 0.24
CSHL1-201ENST00000259003 SCAF8Q9UPN6 1271 aaKnown RBP16.53■□□□□ 0.24
CSHL1-201ENST00000259003 WTIPA6NIX2 430 aaPredicted RBP16.52■□□□□ 0.24
CSHL1-201ENST00000259003 RGS19P49795 217 aa16.52■□□□□ 0.24
CSHL1-201ENST00000259003 DUSP27Q5VZP5 1158 aa16.52■□□□□ 0.24
CSHL1-201ENST00000259003 KRT26Q7Z3Y9 468 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms