RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PASKQ96RG2 1323 aa24.58■■□□□ 1.53
TM6SF1-201ENST00000258909 ITGBL1O95965 494 aaPredicted RBP24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 MAP1SQ66K74 1059 aaPredicted RBP24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 PNMA8AQ86V59 439 aaPredicted RBP24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 MYD88Q99836 296 aa24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 RTFDC1Q9BY42 306 aaPredicted RBP24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 CREBZFQ9NS37 354 aa24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 MKRN1Q9UHC7 482 aaKnown RBP24.58■■□□□ 1.52
TM6SF1-201ENST00000258909 IRS4O14654 1257 aaPredicted RBP24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 LMOD1P29536 600 aaPredicted RBP24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 EPS15P42566 896 aa24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 SCNN1DP51172 638 aa24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 TRIM28Q13263 835 aaKnown RBP24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 SUPT20HQ8NEM7 779 aa24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 CELF1Q92879 486 aaKnown RBP24.57■■□□□ 1.52
TM6SF1-201ENST00000258909 COL4A1P02462 1669 aa24.56■■□□□ 1.52
TM6SF1-201ENST00000258909 ZNF316A6NFI3 1004 aaPredicted RBP24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 SF3B3Q15393 1217 aaKnown RBP24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 VPS33BQ9H267 617 aa24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 MRS2Q9HD23 443 aa24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 ZNRF3Q9ULT6 936 aa24.55■■□□□ 1.52
TM6SF1-201ENST00000258909 CXCL9Q07325 125 aa24.54■■□□□ 1.52
TM6SF1-201ENST00000258909 CCDC30Q5VVM6 783 aa24.54■■□□□ 1.52
TM6SF1-201ENST00000258909 WWC1Q8IX03 1113 aa24.54■■□□□ 1.52
TM6SF1-201ENST00000258909 CNTROBQ8N137 903 aa24.54■■□□□ 1.52
TM6SF1-201ENST00000258909 KIAA2012Q0VF49 1180 aa24.52■■□□□ 1.52
TM6SF1-201ENST00000258909 ZBTB38Q8NAP3 1195 aaPredicted RBP24.52■■□□□ 1.52
TM6SF1-201ENST00000258909 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
TM6SF1-201ENST00000258909 DUOX1Q9NRD9 1551 aa24.52■■□□□ 1.52
TM6SF1-201ENST00000258909 ANP32CO43423 234 aa24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 CCDC27Q2M243 656 aa24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 TMC4Q7Z404 712 aa24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 NSFL1CQ9UNZ2 370 aaKnown RBP24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 SALL2Q9Y467 1007 aaPredicted RBP24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 RAD17O75943 681 aa24.51■■□□□ 1.51
TM6SF1-201ENST00000258909 TMEM88BA6NKF7 163 aa24.5■■□□□ 1.51
TM6SF1-201ENST00000258909 METTL22Q9BUU2 404 aaPredicted RBP24.5■■□□□ 1.51
TM6SF1-201ENST00000258909 SEC31BQ9NQW1 1179 aa24.5■■□□□ 1.51
TM6SF1-201ENST00000258909 MAP3K2Q9Y2U5 619 aa24.5■■□□□ 1.51
TM6SF1-201ENST00000258909 DDX58O95786 925 aaKnown RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 HSPA1AP0DMV8 641 aaKnown RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 HSPA1BP0DMV9 641 aaKnown RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 GMPSP49915 693 aaPredicted RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 GPSM2P81274 684 aa24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 CCDC191Q8NCU4 936 aa24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 CCDC85AQ96PX6 553 aaPredicted RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 CWC25Q9NXE8 425 aaPredicted RBP24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 GPRC5DQ9NZD1 345 aa24.49■■□□□ 1.51
TM6SF1-201ENST00000258909 RIMBP2O15034 1052 aa24.48■■□□□ 1.51
TM6SF1-201ENST00000258909 FMR1Q06787 632 aaKnown RBP eCLIP24.48■■□□□ 1.51
TM6SF1-201ENST00000258909 COL13A1Q5TAT6 717 aaPredicted RBP24.48■■□□□ 1.51
TM6SF1-201ENST00000258909 YDJCA8MPS7 323 aa24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 PCCAP05165 728 aaPredicted RBP24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 RPS8P62241 208 aaKnown RBP24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 TWISTNBQ3B726 338 aaPredicted RBP24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 USP50Q70EL3 339 aaPredicted RBP24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 CHMP4AQ9BY43 222 aa24.47■■□□□ 1.51
TM6SF1-201ENST00000258909 CNTNAP1P78357 1384 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 PI4KAP2A4QPH2 592 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 C6orf229H3BNL8 230 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 WASHC4Q2M389 1173 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 PI4KAP1Q8N8J0 262 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 GPR101Q96P66 508 aaPredicted RBP24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 POLLQ9UGP5 575 aa24.46■■□□□ 1.51
TM6SF1-201ENST00000258909 KSR2Q6VAB6 950 aa24.45■■□□□ 1.51
TM6SF1-201ENST00000258909 G2E3Q7L622 706 aa24.45■■□□□ 1.51
TM6SF1-201ENST00000258909 BCL2L13Q9BXK5 485 aa24.45■■□□□ 1.51
TM6SF1-201ENST00000258909 ADARB2Q9NS39 739 aaKnown RBP24.45■■□□□ 1.51
TM6SF1-201ENST00000258909 TNIP1Q15025 636 aa24.45■■□□□ 1.5
TM6SF1-201ENST00000258909 DBNDD1Q9H9R9 158 aa24.45■■□□□ 1.5
TM6SF1-201ENST00000258909 PDE8AO60658 829 aa24.44■■□□□ 1.5
TM6SF1-201ENST00000258909 IGKV5-2P06315 115 aa24.44■■□□□ 1.5
TM6SF1-201ENST00000258909 IL16Q14005 1332 aa24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 SHTN1A0MZ66 631 aa24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 TRAF5O00463 557 aa24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 SLC4A2P04920 1241 aa24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 HSP90B1P14625 803 aaKnown RBP24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 VEGFBP49765 207 aa24.43■■□□□ 1.5
TM6SF1-201ENST00000258909 DOK7Q18PE1 504 aa24.42■■□□□ 1.5
TM6SF1-201ENST00000258909 CWF19L2Q2TBE0 894 aaKnown RBP24.42■■□□□ 1.5
TM6SF1-201ENST00000258909 CCDC152Q4G0S7 254 aa24.42■■□□□ 1.5
TM6SF1-201ENST00000258909 TBC1D16Q8TBP0 767 aa24.42■■□□□ 1.5
TM6SF1-201ENST00000258909 ZBTB12Q9Y330 459 aaPredicted RBP24.42■■□□□ 1.5
TM6SF1-201ENST00000258909 FANCIQ9NVI1 1328 aa24.41■■□□□ 1.5
TM6SF1-201ENST00000258909 KCNQ5Q9NR82 932 aa24.41■■□□□ 1.5
TM6SF1-201ENST00000258909 ABT1Q9ULW3 272 aaKnown RBP24.41■■□□□ 1.5
TM6SF1-201ENST00000258909 CNOT7Q9UIV1 285 aaKnown RBP24.4■■□□□ 1.5
TM6SF1-201ENST00000258909 PSMD14O00487 310 aa24.39■■□□□ 1.5
TM6SF1-201ENST00000258909 HIRAP54198 1017 aaPredicted RBP24.39■■□□□ 1.5
TM6SF1-201ENST00000258909 NEXNQ0ZGT2 675 aa24.39■■□□□ 1.5
TM6SF1-201ENST00000258909 EYA3Q99504 573 aa24.39■■□□□ 1.5
TM6SF1-201ENST00000258909 ANKIB1Q9P2G1 1089 aa24.39■■□□□ 1.5
TM6SF1-201ENST00000258909 ECE2O60344 883 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 DEFB115Q30KQ5 88 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 NCBP3Q53F19 620 aaKnown RBP24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 TRPM4Q8TD43 1214 aa24.38■■□□□ 1.49
TM6SF1-201ENST00000258909 CDHR2Q9BYE9 1310 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms