RNA–Protein interactions for RNA: ENST00000257013.8

RTL8C-201, Transcript of retrotransposon Gag like 8C, humanhuman

APPRIS P1 BASIC

Gene RTL8C, Length 1,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8C-201ENST00000257013 GRAPQ13588 217 aa27.73■■■□□ 2.03
RTL8C-201ENST00000257013 GRAPLQ8TC17 118 aaPredicted RBP27.73■■■□□ 2.03
RTL8C-201ENST00000257013 YTHDC1Q96MU7 727 aaKnown RBP27.73■■■□□ 2.03
RTL8C-201ENST00000257013 UTRNP46939 3433 aa27.73■■■□□ 2.03
RTL8C-201ENST00000257013 PPEF1O14829 653 aaPredicted RBP27.72■■■□□ 2.03
RTL8C-201ENST00000257013 CCDC93Q567U6 631 aa27.72■■■□□ 2.03
RTL8C-201ENST00000257013 CC2D2BQ6DHV5 1058 aa27.72■■■□□ 2.03
RTL8C-201ENST00000257013 MYH3P11055 1940 aa27.72■■■□□ 2.03
RTL8C-201ENST00000257013 ATF7IPQ6VMQ6 1270 aa27.71■■■□□ 2.03
RTL8C-201ENST00000257013 TMC4Q7Z404 712 aa27.71■■■□□ 2.03
RTL8C-201ENST00000257013 FRAT1Q92837 279 aaPredicted RBP27.71■■■□□ 2.03
RTL8C-201ENST00000257013 UTYO14607 1347 aa27.7■■■□□ 2.03
RTL8C-201ENST00000257013 GRIPAP1Q4V328 841 aa27.7■■■□□ 2.02
RTL8C-201ENST00000257013 ZKSCAN2Q63HK3 967 aa27.7■■■□□ 2.02
RTL8C-201ENST00000257013 TTLL11Q8NHH1 800 aa27.7■■■□□ 2.02
RTL8C-201ENST00000257013 RTKN2Q8IZC4 609 aa27.69■■■□□ 2.02
RTL8C-201ENST00000257013 TMX4Q9H1E5 349 aaPredicted RBP27.69■■■□□ 2.02
RTL8C-201ENST00000257013 FER1L6Q2WGJ9 1857 aa27.69■■■□□ 2.02
RTL8C-201ENST00000257013 LTBP3Q9NS15 1303 aa27.68■■■□□ 2.02
RTL8C-201ENST00000257013 TRIM27P14373 513 aa27.68■■■□□ 2.02
RTL8C-201ENST00000257013 ATP6V0A2Q9Y487 856 aa27.68■■■□□ 2.02
RTL8C-201ENST00000257013 RTL9Q8NET4 1388 aa27.68■■■□□ 2.02
RTL8C-201ENST00000257013 NFKBIEO00221 500 aa27.67■■■□□ 2.02
RTL8C-201ENST00000257013 CSF1RP07333 972 aa27.66■■■□□ 2.02
RTL8C-201ENST00000257013 INTS3Q68E01 1043 aaKnown RBP27.66■■■□□ 2.02
RTL8C-201ENST00000257013 SP8Q8IXZ3 490 aa27.66■■■□□ 2.02
RTL8C-201ENST00000257013 CELF1Q92879 486 aaKnown RBP27.66■■■□□ 2.02
RTL8C-201ENST00000257013 TAOK3Q9H2K8 898 aa27.66■■■□□ 2.02
RTL8C-201ENST00000257013 NBPF7P0C2Y1 421 aaPredicted RBP27.65■■■□□ 2.02
RTL8C-201ENST00000257013 RPS8P62241 208 aaKnown RBP27.65■■■□□ 2.02
RTL8C-201ENST00000257013 RASSF7Q02833 373 aa27.65■■■□□ 2.02
RTL8C-201ENST00000257013 USP44Q9H0E7 712 aa27.65■■■□□ 2.02
RTL8C-201ENST00000257013 SEC31BQ9NQW1 1179 aa27.65■■■□□ 2.02
RTL8C-201ENST00000257013 RCAN3Q9UKA8 241 aa27.65■■■□□ 2.02
RTL8C-201ENST00000257013 TAF1P21675 1872 aa27.65■■■□□ 2.02
RTL8C-201ENST00000257013 FOXO4P98177 505 aa27.64■■■□□ 2.02
RTL8C-201ENST00000257013 OLFM4Q6UX06 510 aa27.64■■■□□ 2.02
RTL8C-201ENST00000257013 CCDC85AQ96PX6 553 aaPredicted RBP27.64■■■□□ 2.02
RTL8C-201ENST00000257013 CDC5LQ99459 802 aaKnown RBP27.64■■■□□ 2.02
RTL8C-201ENST00000257013 SNED1Q8TER0 1413 aa27.64■■■□□ 2.02
RTL8C-201ENST00000257013 SBF1O95248 1867 aa27.64■■■□□ 2.01
RTL8C-201ENST00000257013 LMNB1P20700 586 aa27.63■■■□□ 2.01
RTL8C-201ENST00000257013 FKBP4Q02790 459 aaKnown RBP eCLIP27.63■■■□□ 2.01
RTL8C-201ENST00000257013 GREM2Q9H772 168 aa27.63■■■□□ 2.01
RTL8C-201ENST00000257013 PSMD1Q99460 953 aa27.62■■■□□ 2.01
RTL8C-201ENST00000257013 C9orf131Q5VYM1 1079 aa27.61■■■□□ 2.01
RTL8C-201ENST00000257013 ANKRD18AQ8IVF6 992 aa27.61■■■□□ 2.01
RTL8C-201ENST00000257013 SUCLG2Q96I99 432 aa27.61■■■□□ 2.01
RTL8C-201ENST00000257013 CLUAP1Q96AJ1 413 aa27.6■■■□□ 2.01
RTL8C-201ENST00000257013 RNF181Q9P0P0 153 aa27.6■■■□□ 2.01
RTL8C-201ENST00000257013 LRRC37AA6NMS7 1700 aa27.6■■■□□ 2.01
RTL8C-201ENST00000257013 ITGA6P23229 1130 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 FAM161AQ3B820 660 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 EPHA10Q5JZY3 1008 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 LMBR1LQ6UX01 489 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 KAZALD1Q96I82 304 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 HDAC5Q9UQL6 1122 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 TNNQ9UQP3 1299 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 COL4A1P02462 1669 aa27.59■■■□□ 2.01
RTL8C-201ENST00000257013 PRELPP51888 382 aa27.58■■■□□ 2.01
RTL8C-201ENST00000257013 FTSJ3Q8IY81 847 aaKnown RBP27.58■■■□□ 2.01
RTL8C-201ENST00000257013 ANKRD18BA2A2Z9 1011 aa27.57■■■□□ 2
RTL8C-201ENST00000257013 UBTFL1P0CB47 393 aaPredicted RBP27.57■■■□□ 2
RTL8C-201ENST00000257013 RABL6Q3YEC7 729 aaPredicted RBP27.57■■■□□ 2
RTL8C-201ENST00000257013 DZIP1LQ8IYY4 767 aaKnown RBP27.57■■■□□ 2
RTL8C-201ENST00000257013 MPNDQ8N594 471 aa27.57■■■□□ 2
RTL8C-201ENST00000257013 CCDC88AQ3V6T2 1871 aa27.56■■■□□ 2
RTL8C-201ENST00000257013 MS4A1P11836 297 aa27.56■■■□□ 2
RTL8C-201ENST00000257013 IGHMBP2P38935 993 aaKnown RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 IFIT5Q13325 482 aaKnown RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 DPP8Q6V1X1 898 aaPredicted RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 SLC51AQ86UW1 340 aa27.56■■■□□ 2
RTL8C-201ENST00000257013 SUPT20HQ8NEM7 779 aa27.56■■■□□ 2
RTL8C-201ENST00000257013 BICC1Q9H694 974 aaKnown RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 BSDC1Q9NW68 430 aaPredicted RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 CHMP3Q9Y3E7 222 aa27.56■■■□□ 2
RTL8C-201ENST00000257013 ZC3H4Q9UPT8 1303 aaKnown RBP27.56■■■□□ 2
RTL8C-201ENST00000257013 TMEM57Q8N5G2 664 aa27.55■■■□□ 2
RTL8C-201ENST00000257013 RTFDC1Q9BY42 306 aaPredicted RBP27.55■■■□□ 2
RTL8C-201ENST00000257013 GNAI3P08754 354 aa27.54■■■□□ 2
RTL8C-201ENST00000257013 CCDC57Q2TAC2 916 aa27.54■■■□□ 2
RTL8C-201ENST00000257013 VPS33BQ9H267 617 aa27.54■■■□□ 2
RTL8C-201ENST00000257013 DICER1Q9UPY3 1922 aaKnown RBP27.54■■■□□ 2
RTL8C-201ENST00000257013 IARSP41252 1262 aaKnown RBP27.53■■■□□ 2
RTL8C-201ENST00000257013 ANKRD44Q8N8A2 993 aa27.53■■■□□ 2
RTL8C-201ENST00000257013 MEIS3Q99687 375 aa27.53■■■□□ 2
RTL8C-201ENST00000257013 ZNF277Q9NRM2 450 aaPredicted RBP27.53■■■□□ 2
RTL8C-201ENST00000257013 MPHOSPH8Q99549 860 aa27.52■■■□□ 2
RTL8C-201ENST00000257013 PODXL2Q9NZ53 605 aa27.52■■■□□ 2
RTL8C-201ENST00000257013 NSFL1CQ9UNZ2 370 aaKnown RBP27.52■■■□□ 2
RTL8C-201ENST00000257013 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.51■■□□□ 1.99
RTL8C-201ENST00000257013 RLBP1P12271 317 aa27.5■■□□□ 1.99
RTL8C-201ENST00000257013 GPSM2P81274 684 aa27.5■■□□□ 1.99
RTL8C-201ENST00000257013 SPEF2Q9C093 1822 aa27.49■■□□□ 1.99
RTL8C-201ENST00000257013 TAF7LQ5H9L4 462 aa27.49■■□□□ 1.99
RTL8C-201ENST00000257013 ANKIB1Q9P2G1 1089 aa27.49■■□□□ 1.99
RTL8C-201ENST00000257013 MINPP1Q9UNW1 487 aa27.49■■□□□ 1.99
RTL8C-201ENST00000257013 TIAM2Q8IVF5 1701 aa27.49■■□□□ 1.99
RTL8C-201ENST00000257013 LTBP1Q14766 1721 aa27.48■■□□□ 1.99
RTL8C-201ENST00000257013 ITPRIPQ8IWB1 547 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms