RNA–Protein interactions for RNA: ENST00000256637.7

SORT1-201, Transcript of sortilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SORT1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-201ENST00000256637 PLIN2Q99541 437 aa19.56■□□□□ 0.72
SORT1-201ENST00000256637 ZNF397Q8NF99 534 aaPredicted RBP19.56■□□□□ 0.72
SORT1-201ENST00000256637 LMAN1P49257 510 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 PAGR1Q9BTK6 254 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 EYA3Q99504 573 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 USP16Q9Y5T5 823 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 DOK7Q18PE1 504 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 GADL1Q6ZQY3 521 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 ZGPATQ8N5A5 531 aaKnown RBP19.55■□□□□ 0.72
SORT1-201ENST00000256637 HSP90B2PQ58FF3 399 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 MAEAQ7L5Y9 396 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 CCDC196A0A1B0GTZ2 297 aa19.55■□□□□ 0.72
SORT1-201ENST00000256637 MYCLP12524 364 aaPredicted RBP19.55■□□□□ 0.72
SORT1-201ENST00000256637 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 BACH1O14867 736 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 TRAK2O60296 914 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 LUC7LQ9NQ29 371 aaKnown RBP19.54■□□□□ 0.72
SORT1-201ENST00000256637 PPIP5K2O43314 1243 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 NIM1KQ8IY84 436 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 RAB34Q9BZG1 259 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 CHMP2AO43633 222 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 NAPAP54920 295 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 CFAP100Q494V2 611 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 C20orf194Q5TEA3 1177 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 CFAP45Q9UL16 551 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 PCDH11XQ9BZA7 1347 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 PCDH11YQ9BZA8 1340 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 MCM2P49736 904 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 SLC9C2Q5TAH2 1124 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 JAKMIP3Q5VZ66 844 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 WTAPQ15007 396 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 TEX35Q5T0J7 233 aa19.54■□□□□ 0.72
SORT1-201ENST00000256637 LETM1O95202 739 aaPredicted RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 TDRD12Q587J7 1177 aaKnown RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 ABT1Q9ULW3 272 aaKnown RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 MTHFSDQ2M296 383 aaKnown RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 AKAP4Q5JQC9 854 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 CCDC174Q6PII3 467 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 FAM47CQ5HY64 1035 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 FILIP1Q7Z7B0 1213 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 EIF4A2Q14240 407 aaKnown RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 WDR33Q9C0J8 1336 aaKnown RBP19.53■□□□□ 0.72
SORT1-201ENST00000256637 KRT24Q2M2I5 525 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 HSP90AA4PQ58FG1 418 aa19.53■□□□□ 0.72
SORT1-201ENST00000256637 DISP3Q9P2K9 1392 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 ARL1P40616 181 aaPredicted RBP19.52■□□□□ 0.72
SORT1-201ENST00000256637 CCDC40Q4G0X9 1142 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 OTUD6BQ8N6M0 293 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 TMEM110-MUSTN1A8MSY1 372 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 USH1GQ495M9 461 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 SLAIN2Q9P270 581 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 A2MP01023 1474 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 CCDC192P0DO97 292 aa19.52■□□□□ 0.72
SORT1-201ENST00000256637 PRPF4BQ13523 1007 aaKnown RBP19.52■□□□□ 0.72
SORT1-201ENST00000256637 SMCR8Q8TEV9 937 aaPredicted RBP19.51■□□□□ 0.71
SORT1-201ENST00000256637 ABCA10Q8WWZ4 1543 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 DPY19L2Q6NUT2 758 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 CCDC112Q8NEF3 446 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 ABCC1P33527 1531 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 NCBP1Q09161 790 aaKnown RBP19.51■□□□□ 0.71
SORT1-201ENST00000256637 PDE3AQ14432 1141 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 ZNF594Q96JF6 807 aaPredicted RBP19.51■□□□□ 0.71
SORT1-201ENST00000256637 TFIP11Q9UBB9 837 aaKnown RBP19.51■□□□□ 0.71
SORT1-201ENST00000256637 AFMP43652 599 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 RPAP2Q8IXW5 612 aaPredicted RBP19.51■□□□□ 0.71
SORT1-201ENST00000256637 CPXCR1Q8N123 301 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 SLFN5Q08AF3 891 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 FKBP15Q5T1M5 1219 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 IVNS1ABPQ9Y6Y0 642 aa19.51■□□□□ 0.71
SORT1-201ENST00000256637 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
SORT1-201ENST00000256637 TAF4BQ92750 862 aa19.5■□□□□ 0.71
SORT1-201ENST00000256637 NUP62CLQ9H1M0 184 aa19.5■□□□□ 0.71
SORT1-201ENST00000256637 ARGLU1Q9NWB6 273 aaPredicted RBP19.5■□□□□ 0.71
SORT1-201ENST00000256637 TCP10L2B9ZVM9 353 aa19.5■□□□□ 0.71
SORT1-201ENST00000256637 C14orf93Q9H972 538 aaKnown RBP19.5■□□□□ 0.71
SORT1-201ENST00000256637 GGA1Q9UJY5 639 aa19.5■□□□□ 0.71
SORT1-201ENST00000256637 TBCAO75347 108 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 MTIF2P46199 727 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 DHX29Q7Z478 1369 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 GOLGA6L10A6NI86 522 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 TCP11L1Q9NUJ3 509 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 EPB41L2O43491 1005 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 FCHSD1Q86WN1 690 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 ACBD3Q9H3P7 528 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 UQCRFS1P1P0C7P4 283 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 ZRSR2Q15696 482 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 CT47B1P0C2W7 299 aaPredicted RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 TFCP2Q12800 502 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 EVI5LQ96CN4 794 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 SPDYE3A6NKU9 549 aa19.49■□□□□ 0.71
SORT1-201ENST00000256637 IARSP41252 1262 aaKnown RBP19.49■□□□□ 0.71
SORT1-201ENST00000256637 NUP88Q99567 741 aaPredicted RBP19.48■□□□□ 0.71
SORT1-201ENST00000256637 BCCIPQ9P287 314 aaKnown RBP eCLIP19.48■□□□□ 0.71
SORT1-201ENST00000256637 A1BGP04217 495 aa19.48■□□□□ 0.71
SORT1-201ENST00000256637 NCOA7Q8NI08 942 aa19.48■□□□□ 0.71
SORT1-201ENST00000256637 HMGN5P82970 282 aaKnown RBP19.48■□□□□ 0.71
SORT1-201ENST00000256637 CCDC12Q8WUD4 166 aaPredicted RBP19.48■□□□□ 0.71
SORT1-201ENST00000256637 H7C1D1 291 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms