RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 LGR6Q9HBX8 967 aa14.07□□□□□ -0.16
CCNA1-201ENST00000255465 MAP3K5Q99683 1374 aa14.07□□□□□ -0.16
CCNA1-201ENST00000255465 CCDC196A0A1B0GTZ2 297 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 GNAT3A8MTJ3 354 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 MYO1CO00159 1063 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 RNMTO43148 476 aaKnown RBP14.06□□□□□ -0.16
CCNA1-201ENST00000255465 GPS2Q13227 327 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 CWC22Q9HCG8 908 aaKnown RBP14.06□□□□□ -0.16
CCNA1-201ENST00000255465 TAOK2Q9UL54 1235 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 CYP2E1P05181 493 aaPredicted RBP14.06□□□□□ -0.16
CCNA1-201ENST00000255465 CABP4P57796 275 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 ADAMTS8Q9UP79 889 aa14.06□□□□□ -0.16
CCNA1-201ENST00000255465 SIPA1L3O60292 1781 aaPredicted RBP14.05□□□□□ -0.16
CCNA1-201ENST00000255465 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 SSFA2P28290 1259 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 SLFN5Q08AF3 891 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 NBPF5PQ86XG9 351 aaPredicted RBP14.05□□□□□ -0.16
CCNA1-201ENST00000255465 IQUBQ8NA54 791 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 NFATC2IPQ8NCF5 419 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 CEP89Q96ST8 783 aa14.05□□□□□ -0.16
CCNA1-201ENST00000255465 MRC1P22897 1456 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 TPM4P67936 248 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 PDZRN3Q9UPQ7 1066 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 HTATSF1O43719 755 aaKnown RBP14.04□□□□□ -0.16
CCNA1-201ENST00000255465 ATP6V1AP38606 617 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 TTC31Q49AM3 519 aaPredicted RBP14.04□□□□□ -0.16
CCNA1-201ENST00000255465 IL17REQ8NFR9 667 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 SMARCC1Q92922 1105 aaPredicted RBP14.04□□□□□ -0.16
CCNA1-201ENST00000255465 LRRC4BQ9NT99 713 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 USP25Q9UHP3 1055 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 ASAP1Q9ULH1 1129 aa14.04□□□□□ -0.16
CCNA1-201ENST00000255465 SLC27A3Q5K4L6 730 aa14.03□□□□□ -0.16
CCNA1-201ENST00000255465 SLC52A2Q9HAB3 445 aa14.03□□□□□ -0.16
CCNA1-201ENST00000255465 SUFUQ9UMX1 484 aa14.03□□□□□ -0.16
CCNA1-201ENST00000255465 CCDC189A1A4V9 331 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 LIG1P18858 919 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 RNF217Q8TC41 542 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 FAM210AQ96ND0 272 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 PAPPAQ13219 1627 aa14.02□□□□□ -0.16
CCNA1-201ENST00000255465 C5P01031 1676 aa14.02□□□□□ -0.17
CCNA1-201ENST00000255465 IRF6O14896 467 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 MAGEA9P43362 315 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 KCNQ4P56696 695 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 NFE2L2Q16236 605 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 C11orf91Q3C1V1 193 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 CEMIPQ8WUJ3 1361 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 NBPF14Q5TI25 921 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 LRCH2Q5VUJ6 765 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 MCTP2Q6DN12 878 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 MCTP1Q6DN14 999 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 JMYQ8N9B5 988 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 RTF1Q92541 710 aaKnown RBP14.01□□□□□ -0.17
CCNA1-201ENST00000255465 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
CCNA1-201ENST00000255465 CCNL1Q9UK58 526 aaPredicted RBP14.01□□□□□ -0.17
CCNA1-201ENST00000255465 ZNF831Q5JPB2 1677 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 ATP8B1O43520 1251 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 EP400NLQ6ZTU2 488 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 SRLQ86TD4 932 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 OTUD6BQ8N6M0 293 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 ZNF592Q92610 1267 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 ZNF446Q9NWS9 450 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 PSD3Q9NYI0 1048 aa14□□□□□ -0.17
CCNA1-201ENST00000255465 KLHL33A6NCF5 533 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 FAM177BA6PVY3 158 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 TEFQ10587 303 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 SEMA3FQ13275 785 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 DCTN1Q14203 1278 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 SYT10Q6XYQ8 523 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 MCM10Q7L590 875 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 GPATCH11Q8N954 259 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 GOLGA5Q8TBA6 731 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 TUBGCP6Q96RT7 1819 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 UBR2Q8IWV8 1755 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 TMPOP42166 694 aaKnown RBP13.99□□□□□ -0.17
CCNA1-201ENST00000255465 SIK1P57059 783 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 R3HDM1Q15032 1099 aaKnown RBP13.99□□□□□ -0.17
CCNA1-201ENST00000255465 CCDC112Q8NEF3 446 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 ITFG2Q969R8 447 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 SGSM3Q96HU1 749 aa13.99□□□□□ -0.17
CCNA1-201ENST00000255465 PSDA5PKW4 1024 aaPredicted RBP13.98□□□□□ -0.17
CCNA1-201ENST00000255465 PSMD1Q99460 953 aa13.98□□□□□ -0.17
CCNA1-201ENST00000255465 CPP00450 1065 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 IVLP07476 585 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 C10orf67Q8IYJ2 551 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 FBXO18Q8NFZ0 1043 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 GPT2Q8TD30 523 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 PPM1EQ8WY54 764 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 RBM42Q9BTD8 480 aaKnown RBP13.97□□□□□ -0.17
CCNA1-201ENST00000255465 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
CCNA1-201ENST00000255465 QSER1Q2KHR3 1735 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 SYCE3A1L190 88 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 SLC15A2Q16348 729 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 CASC1Q6TDU7 716 aa13.97□□□□□ -0.17
CCNA1-201ENST00000255465 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms